RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 PSMD3O43242 534 aa5.07□□□□□ -1.6
HERC4-205ENST00000412272 SOX30O94993 753 aa5.07□□□□□ -1.6
HERC4-205ENST00000412272 SBK2P0C263 348 aa5.07□□□□□ -1.6
HERC4-205ENST00000412272 FGFR3P22607 806 aa5.07□□□□□ -1.6
HERC4-205ENST00000412272 ITGA3P26006 1051 aa5.07□□□□□ -1.6
HERC4-205ENST00000412272 MGAT1P26572 445 aa5.07□□□□□ -1.6
HERC4-205ENST00000412272 CDKN1BP46527 198 aa5.07□□□□□ -1.6
HERC4-205ENST00000412272 PIK3CGP48736 1102 aa5.07□□□□□ -1.6
HERC4-205ENST00000412272 PSME3P61289 254 aa5.07□□□□□ -1.6
HERC4-205ENST00000412272 HTD2P86397 168 aa5.07□□□□□ -1.6
HERC4-205ENST00000412272 GAGE1Q13065 139 aa5.07□□□□□ -1.6
HERC4-205ENST00000412272 TRA2AQ13595 282 aaKnown RBP eCLIP5.07□□□□□ -1.6
HERC4-205ENST00000412272 MRPL58Q14197 206 aaKnown RBP5.07□□□□□ -1.6
HERC4-205ENST00000412272 CHI3L2Q15782 390 aa5.07□□□□□ -1.6
HERC4-205ENST00000412272 ACTBL2Q562R1 376 aa5.07□□□□□ -1.6
HERC4-205ENST00000412272 C10orf120Q5SQS8 335 aa5.07□□□□□ -1.6
HERC4-205ENST00000412272 ZC3H14Q6PJT7 736 aaKnown RBP5.07□□□□□ -1.6
HERC4-205ENST00000412272 SPNS3Q6ZMD2 512 aa5.07□□□□□ -1.6
HERC4-205ENST00000412272 STRADAQ7RTN6 431 aa5.07□□□□□ -1.6
HERC4-205ENST00000412272 DHFR2Q86XF0 187 aa5.07□□□□□ -1.6
HERC4-205ENST00000412272 NAXEQ8NCW5 288 aa5.07□□□□□ -1.6
HERC4-205ENST00000412272 PAPD5Q8NDF8 572 aaKnown RBP5.07□□□□□ -1.6
HERC4-205ENST00000412272 DENND6BQ8NEG7 585 aa5.07□□□□□ -1.6
HERC4-205ENST00000412272 C22orf15Q8WYQ4 148 aa5.07□□□□□ -1.6
HERC4-205ENST00000412272 LRTOMTQ8WZ04 291 aa5.07□□□□□ -1.6
HERC4-205ENST00000412272 CPXM1Q96SM3 734 aa5.07□□□□□ -1.6
HERC4-205ENST00000412272 DNTTIP1Q9H147 329 aa5.07□□□□□ -1.6
HERC4-205ENST00000412272 FAM83DQ9H4H8 585 aa5.07□□□□□ -1.6
HERC4-205ENST00000412272 ZNF334Q9HCZ1 680 aaPredicted RBP5.07□□□□□ -1.6
HERC4-205ENST00000412272 JAG2Q9Y219 1238 aa5.07□□□□□ -1.6
HERC4-205ENST00000412272 FOCADQ5VW36 1801 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 A0A1W2PRB8 838 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 WASH3PC4AMC7 463 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 M0R3G1 203 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 PIK3R2O00459 728 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 PPP6CO00743 305 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 STX7O15400 261 aaKnown RBP5.06□□□□□ -1.6
HERC4-205ENST00000412272 SLC16A6O15403 523 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 SLC25A17O43808 307 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 TSPAN2O60636 221 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 TSPAN3O60637 253 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 AKAP3O75969 853 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 SUPT7LO94864 414 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 ZFPL1O95159 310 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 MPC2O95563 127 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 CLIC3O95833 236 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 HTR1AP08908 422 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 GAAP10253 952 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 ITGAMP11215 1152 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 PCMT1P22061 227 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 RPS3P23396 243 aaKnown RBP eCLIP5.06□□□□□ -1.68e-6■■□□□ 12.7
HERC4-205ENST00000412272 CD68P34810 354 aaPredicted RBP5.06□□□□□ -1.6
HERC4-205ENST00000412272 FMO5P49326 533 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 ANXA11P50995 505 aaKnown RBP5.06□□□□□ -1.6
HERC4-205ENST00000412272 HIF1AQ16665 826 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 COL28A1Q2UY09 1125 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 PTCHD3Q3KNS1 767 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 SLC39A12Q504Y0 691 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 DARS2Q6PI48 645 aaKnown RBP5.06□□□□□ -1.6
HERC4-205ENST00000412272 CDHR3Q6ZTQ4 885 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 FAM92BQ6ZTR7 304 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 DCXRQ7Z4W1 244 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 SLC26A11Q86WA9 606 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 CMIPQ8IY22 773 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 ENTHD1Q8IYW4 607 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 PLD6Q8N2A8 252 aaKnown RBP5.06□□□□□ -1.6
HERC4-205ENST00000412272 SFRP1Q8N474 314 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 POMGNT2Q8NAT1 580 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 FBLIM1Q8WUP2 373 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 MAFIPQ8WZ33 124 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 MYLPFQ96A32 169 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 ZNF707Q96C28 371 aaPredicted RBP5.06□□□□□ -1.6
HERC4-205ENST00000412272 YIPF6Q96EC8 236 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 FBXL20Q96IG2 436 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 HYLS1Q96M11 299 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 PPM1MQ96MI6 270 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 ZNF300Q96RE9 604 aaPredicted RBP5.06□□□□□ -1.6
HERC4-205ENST00000412272 TXN2Q99757 166 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 AMNQ9BXJ7 453 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 GAL3ST2Q9H3Q3 398 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 PRDM13Q9H4Q3 707 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 ENTPD7Q9NQZ7 604 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 SIRT7Q9NRC8 400 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 AGPAT4Q9NRZ5 378 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 MED17Q9NVC6 651 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 DMAC2Q9NW81 257 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 MPP6Q9NZW5 540 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 VAPAQ9P0L0 249 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 AKAP7Q9P0M2 348 aaPredicted RBP5.06□□□□□ -1.6
HERC4-205ENST00000412272 OR12D3Q9UGF7 316 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 UBQLN2Q9UHD9 624 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 PACSIN3Q9UKS6 424 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 IRS2Q9Y4H2 1338 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 OR2AT4A6NND4 320 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 LGALS8O00214 317 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 VAMP5O95183 116 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 STARD3NLO95772 234 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 NPSP0C0P6 89 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 TCF4P15884 667 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 DSG3P32926 999 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms