RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 VPS13CQ709C8 3753 aa15.65■□□□□ 0.1
CHMP3-203ENST00000409225 FAM237BA0A1B0GVD1 139 aa15.65■□□□□ 0.1
CHMP3-203ENST00000409225 CD3EAPO15446 510 aaKnown RBP15.65■□□□□ 0.1
CHMP3-203ENST00000409225 PRMT3O60678 531 aa15.65■□□□□ 0.1
CHMP3-203ENST00000409225 MATN4O95460 622 aa15.65■□□□□ 0.1
CHMP3-203ENST00000409225 FOSL1P15407 271 aa15.65■□□□□ 0.1
CHMP3-203ENST00000409225 BCL6P41182 706 aa15.65■□□□□ 0.1
CHMP3-203ENST00000409225 CETN2P41208 172 aa15.65■□□□□ 0.1
CHMP3-203ENST00000409225 GRIA1P42261 906 aa15.65■□□□□ 0.1
CHMP3-203ENST00000409225 ITGA8P53708 1063 aa15.65■□□□□ 0.1
CHMP3-203ENST00000409225 PNLIPRP1P54315 467 aa15.65■□□□□ 0.1
CHMP3-203ENST00000409225 EIF3BP55884 814 aaKnown RBP15.65■□□□□ 0.1
CHMP3-203ENST00000409225 OR4D2P58180 307 aa15.65■□□□□ 0.1
CHMP3-203ENST00000409225 CMPK2Q5EBM0 449 aa15.65■□□□□ 0.1
CHMP3-203ENST00000409225 SULF2Q8IWU5 870 aa15.65■□□□□ 0.1
CHMP3-203ENST00000409225 ZCCHC10Q8TBK6 192 aa15.65■□□□□ 0.1
CHMP3-203ENST00000409225 PKP4Q99569 1192 aa15.65■□□□□ 0.1
CHMP3-203ENST00000409225 ZNF358Q9NW07 568 aa15.65■□□□□ 0.1
CHMP3-203ENST00000409225 TCAF1Q9Y4C2 921 aa15.65■□□□□ 0.1
CHMP3-203ENST00000409225 GTF3C3Q9Y5Q9 886 aa15.65■□□□□ 0.1
CHMP3-203ENST00000409225 MYO1CO00159 1063 aa15.64■□□□□ 0.09
CHMP3-203ENST00000409225 RDH16O75452 317 aa15.64■□□□□ 0.09
CHMP3-203ENST00000409225 NDUFS3O75489 264 aa15.64■□□□□ 0.09
CHMP3-203ENST00000409225 CTAG2O75638 210 aa15.64■□□□□ 0.09
CHMP3-203ENST00000409225 PTMAP06454 111 aaKnown RBP15.64■□□□□ 0.09
CHMP3-203ENST00000409225 FLNAP21333 2647 aaKnown RBP15.64■□□□□ 0.09
CHMP3-203ENST00000409225 RPS3P23396 243 aaKnown RBP eCLIP15.64■□□□□ 0.09
CHMP3-203ENST00000409225 DNASE1P24855 282 aa15.64■□□□□ 0.09
CHMP3-203ENST00000409225 RWDD2BP57060 319 aa15.64■□□□□ 0.09
CHMP3-203ENST00000409225 RHAGQ02094 409 aa15.64■□□□□ 0.09
CHMP3-203ENST00000409225 RELAQ04206 551 aa15.64■□□□□ 0.09
CHMP3-203ENST00000409225 ARHGAP19Q14CB8 494 aa15.64■□□□□ 0.09
CHMP3-203ENST00000409225 CTSL3PQ5NE16 218 aa15.64■□□□□ 0.09
CHMP3-203ENST00000409225 VN1R4Q7Z5H5 301 aa15.64■□□□□ 0.09
CHMP3-203ENST00000409225 ZZZ3Q8IYH5 903 aa15.64■□□□□ 0.09
CHMP3-203ENST00000409225 ELP5Q8TE02 316 aa15.64■□□□□ 0.09
CHMP3-203ENST00000409225 PEX11GQ96HA9 241 aa15.64■□□□□ 0.09
CHMP3-203ENST00000409225 PWWP2AQ96N64 755 aa15.64■□□□□ 0.09
CHMP3-203ENST00000409225 GPATCH1Q9BRR8 931 aaKnown RBP15.64■□□□□ 0.09
CHMP3-203ENST00000409225 KLF13Q9Y2Y9 288 aaPredicted RBP15.64■□□□□ 0.09
CHMP3-203ENST00000409225 SCN3AQ9NY46 2000 aa15.63■□□□□ 0.09
CHMP3-203ENST00000409225 SYCE3A1L190 88 aa15.63■□□□□ 0.09
CHMP3-203ENST00000409225 ZNF839A8K0R7 811 aa15.63■□□□□ 0.09
CHMP3-203ENST00000409225 H7BY64 318 aa15.63■□□□□ 0.09
CHMP3-203ENST00000409225 SMAPO00193 183 aa15.63■□□□□ 0.09
CHMP3-203ENST00000409225 PEX1O43933 1283 aa15.63■□□□□ 0.09
CHMP3-203ENST00000409225 HLCSP50747 726 aa15.63■□□□□ 0.09
CHMP3-203ENST00000409225 MLF1P58340 268 aa15.63■□□□□ 0.09
CHMP3-203ENST00000409225 ADAM8P78325 824 aa15.63■□□□□ 0.09
CHMP3-203ENST00000409225 ABATP80404 500 aa15.63■□□□□ 0.09
CHMP3-203ENST00000409225 EMC4Q5J8M3 183 aa15.63■□□□□ 0.09
CHMP3-203ENST00000409225 THEMIS2Q5TEJ8 643 aa15.63■□□□□ 0.09
CHMP3-203ENST00000409225 ACAD11Q709F0 780 aa15.63■□□□□ 0.09
CHMP3-203ENST00000409225 TAOK1Q7L7X3 1001 aa15.63■□□□□ 0.09
CHMP3-203ENST00000409225 LRRC6Q86X45 466 aa15.63■□□□□ 0.09
CHMP3-203ENST00000409225 OTUD6BQ8N6M0 293 aa15.63■□□□□ 0.09
CHMP3-203ENST00000409225 PLPP5Q8NEB5 264 aa15.63■□□□□ 0.09
CHMP3-203ENST00000409225 PPHLN1Q8NEY8 458 aaKnown RBP15.63■□□□□ 0.09
CHMP3-203ENST00000409225 OR52N2Q8NGI0 321 aa15.63■□□□□ 0.09
CHMP3-203ENST00000409225 OR5M3Q8NGP4 307 aa15.63■□□□□ 0.09
CHMP3-203ENST00000409225 OR10Q1Q8NGQ4 319 aa15.63■□□□□ 0.09
CHMP3-203ENST00000409225 ALG3Q92685 438 aa15.63■□□□□ 0.09
CHMP3-203ENST00000409225 RMND5BQ96G75 393 aaPredicted RBP15.63■□□□□ 0.09
CHMP3-203ENST00000409225 CCDC138Q96M89 665 aa15.63■□□□□ 0.09
CHMP3-203ENST00000409225 PRAP1Q96NZ9 151 aa15.63■□□□□ 0.09
CHMP3-203ENST00000409225 EBNA1BP2Q99848 306 aaKnown RBP15.63■□□□□ 0.09
CHMP3-203ENST00000409225 TRIM45Q9H8W5 580 aaPredicted RBP15.63■□□□□ 0.09
CHMP3-203ENST00000409225 ANKHQ9HCJ1 492 aa15.63■□□□□ 0.09
CHMP3-203ENST00000409225 FAM114A2Q9NRY5 505 aa15.63■□□□□ 0.09
CHMP3-203ENST00000409225 L3MBTL1Q9Y468 752 aa15.63■□□□□ 0.09
CHMP3-203ENST00000409225 GOLGA6L9A6NEM1 432 aa15.62■□□□□ 0.09
CHMP3-203ENST00000409225 ZNF860A6NHJ4 632 aa15.62■□□□□ 0.09
CHMP3-203ENST00000409225 ERI2A8K979 691 aaKnown RBP15.62■□□□□ 0.09
CHMP3-203ENST00000409225 MAGEB17A8MXT2 336 aa15.62■□□□□ 0.09
CHMP3-203ENST00000409225 KLRC4-KLRK1H3BQV0 150 aa15.62■□□□□ 0.09
CHMP3-203ENST00000409225 CDK2AP1O14519 115 aa15.62■□□□□ 0.09
CHMP3-203ENST00000409225 PROM1O43490 865 aa15.62■□□□□ 0.09
CHMP3-203ENST00000409225 NIPSNAP2O75323 286 aa15.62■□□□□ 0.09
CHMP3-203ENST00000409225 PSIP1O75475 530 aaKnown RBP15.62■□□□□ 0.09
CHMP3-203ENST00000409225 SLC16A8O95907 504 aa15.62■□□□□ 0.09
CHMP3-203ENST00000409225 CATP04040 527 aaKnown RBP15.62■□□□□ 0.09
CHMP3-203ENST00000409225 ATP5DP30049 168 aa15.62■□□□□ 0.09
CHMP3-203ENST00000409225 FMO4P31512 558 aa15.62■□□□□ 0.09
CHMP3-203ENST00000409225 HSD17B2P37059 387 aa15.62■□□□□ 0.09
CHMP3-203ENST00000409225 NR0B1P51843 470 aaKnown RBP15.62■□□□□ 0.09
CHMP3-203ENST00000409225 DGKQP52824 942 aa15.62■□□□□ 0.09
CHMP3-203ENST00000409225 DLX5P56178 289 aa15.62■□□□□ 0.09
CHMP3-203ENST00000409225 GBX1Q14549 363 aa15.62■□□□□ 0.09
CHMP3-203ENST00000409225 TMEM214Q6NUQ4 689 aaKnown RBP15.62■□□□□ 0.09
CHMP3-203ENST00000409225 ARHGAP11AQ6P4F7 1023 aa15.62■□□□□ 0.09
CHMP3-203ENST00000409225 PCGF5Q86SE9 256 aa15.62■□□□□ 0.09
CHMP3-203ENST00000409225 PDSS2Q86YH6 399 aa15.62■□□□□ 0.09
CHMP3-203ENST00000409225 ZNF480Q8WV37 535 aa15.62■□□□□ 0.09
CHMP3-203ENST00000409225 ALPK1Q96QP1 1244 aa15.62■□□□□ 0.09
CHMP3-203ENST00000409225 SMR3AQ99954 134 aa15.62■□□□□ 0.09
CHMP3-203ENST00000409225 DEFB127Q9H1M4 99 aa15.62■□□□□ 0.09
CHMP3-203ENST00000409225 CLEC4MQ9H2X3 399 aaPredicted RBP15.62■□□□□ 0.09
CHMP3-203ENST00000409225 ETNK1Q9HBU6 452 aa15.62■□□□□ 0.09
CHMP3-203ENST00000409225 CHRAC1Q9NRG0 131 aa15.62■□□□□ 0.09
CHMP3-203ENST00000409225 LANCL2Q9NS86 450 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms