RNA–Protein interactions for RNA: ENST00000407263.2

TSPAN9-202, Transcript of tetraspanin 9, humanhuman

TSL 5 BASIC

Gene TSPAN9, Length 956 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-202ENST00000407263 SMIM24O75264 130 aa9.78□□□□□ -0.84
TSPAN9-202ENST00000407263 B3GALT4O96024 378 aa9.78□□□□□ -0.84
TSPAN9-202ENST00000407263 C1GALT1C1LP0DN25 315 aa9.78□□□□□ -0.84
TSPAN9-202ENST00000407263 CD22P20273 847 aa9.78□□□□□ -0.84
TSPAN9-202ENST00000407263 EEF1DP29692 281 aaKnown RBP9.78□□□□□ -0.84
TSPAN9-202ENST00000407263 OTX2P32243 289 aa9.78□□□□□ -0.84
TSPAN9-202ENST00000407263 GGT5P36269 586 aa9.78□□□□□ -0.84
TSPAN9-202ENST00000407263 ARL1P40616 181 aaPredicted RBP9.78□□□□□ -0.84
TSPAN9-202ENST00000407263 HNF4AP41235 474 aa9.78□□□□□ -0.84
TSPAN9-202ENST00000407263 FOLR3P41439 243 aa9.78□□□□□ -0.84
TSPAN9-202ENST00000407263 SCTRP47872 440 aa9.78□□□□□ -0.84
TSPAN9-202ENST00000407263 ALDH18A1P54886 795 aaKnown RBP9.78□□□□□ -0.84
TSPAN9-202ENST00000407263 MAT1AQ00266 395 aaKnown RBP9.78□□□□□ -0.84
TSPAN9-202ENST00000407263 IRF8Q02556 426 aa9.78□□□□□ -0.84
TSPAN9-202ENST00000407263 CHIT1Q13231 466 aa9.78□□□□□ -0.84
TSPAN9-202ENST00000407263 DEFB109BQ30KR1 87 aa9.78□□□□□ -0.84
TSPAN9-202ENST00000407263 FAM214AQ32MH5 1076 aa9.78□□□□□ -0.84
TSPAN9-202ENST00000407263 TOR1AIP1Q5JTV8 583 aa9.78□□□□□ -0.84
TSPAN9-202ENST00000407263 CDKL4Q5MAI5 379 aa9.78□□□□□ -0.84
TSPAN9-202ENST00000407263 YOD1Q5VVQ6 348 aaPredicted RBP9.78□□□□□ -0.84
TSPAN9-202ENST00000407263 PRAMEF9Q5VWM5 478 aa9.78□□□□□ -0.84
TSPAN9-202ENST00000407263 FAM219BQ5XKK7 198 aa9.78□□□□□ -0.84
TSPAN9-202ENST00000407263 ATG9BQ674R7 924 aa9.78□□□□□ -0.84
TSPAN9-202ENST00000407263 RPS27LQ71UM5 84 aaKnown RBP9.78□□□□□ -0.84
TSPAN9-202ENST00000407263 SYVN1Q86TM6 617 aa9.78□□□□□ -0.84
TSPAN9-202ENST00000407263 C4orf33Q8N1A6 199 aa9.78□□□□□ -0.84
TSPAN9-202ENST00000407263 ARHGEF39Q8N4T4 335 aa9.78□□□□□ -0.84
TSPAN9-202ENST00000407263 CAMKVQ8NCB2 501 aa9.78□□□□□ -0.84
TSPAN9-202ENST00000407263 OR4K1Q8NGD4 311 aa9.78□□□□□ -0.84
TSPAN9-202ENST00000407263 OR9A4Q8NGU2 314 aa9.78□□□□□ -0.84
TSPAN9-202ENST00000407263 SLC13A3Q8WWT9 602 aa9.78□□□□□ -0.84
TSPAN9-202ENST00000407263 PHF21BQ96EK2 531 aa9.78□□□□□ -0.84
TSPAN9-202ENST00000407263 THAP11Q96EK4 314 aa9.78□□□□□ -0.84
TSPAN9-202ENST00000407263 MMABQ96EY8 250 aaPredicted RBP9.78□□□□□ -0.84
TSPAN9-202ENST00000407263 GPR87Q9BY21 358 aa9.78□□□□□ -0.84
TSPAN9-202ENST00000407263 RBCK1Q9BYM8 510 aa9.78□□□□□ -0.84
TSPAN9-202ENST00000407263 MRPL46Q9H2W6 279 aaKnown RBP9.78□□□□□ -0.84
TSPAN9-202ENST00000407263 SOX17Q9H6I2 414 aaPredicted RBP9.78□□□□□ -0.84
TSPAN9-202ENST00000407263 ZNF304Q9HCX3 659 aa9.78□□□□□ -0.84
TSPAN9-202ENST00000407263 ACSS2Q9NR19 701 aa9.78□□□□□ -0.84
TSPAN9-202ENST00000407263 TMEM216Q9P0N5 145 aa9.78□□□□□ -0.84
TSPAN9-202ENST00000407263 HCN3Q9P1Z3 774 aa9.78□□□□□ -0.84
TSPAN9-202ENST00000407263 TCFL5Q9UL49 500 aa9.78□□□□□ -0.84
TSPAN9-202ENST00000407263 PLAAQ9Y263 795 aa9.78□□□□□ -0.84
TSPAN9-202ENST00000407263 FARSAQ9Y285 508 aaKnown RBP9.78□□□□□ -0.84
TSPAN9-202ENST00000407263 DOCK10Q96BY6 2186 aa9.78□□□□□ -0.84
TSPAN9-202ENST00000407263 CPAMD8Q8IZJ3 1885 aa9.77□□□□□ -0.85
TSPAN9-202ENST00000407263 KCNE1BA0A087WTH5 132 aa9.77□□□□□ -0.85
TSPAN9-202ENST00000407263 A0A0G2JN53 185 aa9.77□□□□□ -0.85
TSPAN9-202ENST00000407263 A8MT66 165 aa9.77□□□□□ -0.85
TSPAN9-202ENST00000407263 C4orf51C9J302 202 aa9.77□□□□□ -0.85
TSPAN9-202ENST00000407263 SGK494L7N484 410 aa9.77□□□□□ -0.85
TSPAN9-202ENST00000407263 TXNDC9O14530 226 aa9.77□□□□□ -0.85
TSPAN9-202ENST00000407263 MAP2K7O14733 419 aa9.77□□□□□ -0.85
TSPAN9-202ENST00000407263 KLK8O60259 260 aa9.77□□□□□ -0.85
TSPAN9-202ENST00000407263 CDH16O75309 829 aa9.77□□□□□ -0.85
TSPAN9-202ENST00000407263 GLRA3O75311 464 aa9.77□□□□□ -0.85
TSPAN9-202ENST00000407263 RDH16O75452 317 aa9.77□□□□□ -0.85
TSPAN9-202ENST00000407263 RBP1P09455 135 aa9.77□□□□□ -0.85
TSPAN9-202ENST00000407263 NUDT17P0C025 328 aa9.77□□□□□ -0.85
TSPAN9-202ENST00000407263 RAB40ALP0C0E4 278 aa9.77□□□□□ -0.85
TSPAN9-202ENST00000407263 SBK3P0C264 359 aa9.77□□□□□ -0.85
TSPAN9-202ENST00000407263 ZNF888P0CJ79 500 aaPredicted RBP9.77□□□□□ -0.85
TSPAN9-202ENST00000407263 PCNAP12004 261 aa9.77□□□□□ -0.85
TSPAN9-202ENST00000407263 COL6A2P12110 1019 aa9.77□□□□□ -0.85
TSPAN9-202ENST00000407263 OLR1P78380 273 aa9.77□□□□□ -0.85
TSPAN9-202ENST00000407263 MC1RQ01726 317 aa9.77□□□□□ -0.85
TSPAN9-202ENST00000407263 RELAQ04206 551 aa9.77□□□□□ -0.85
TSPAN9-202ENST00000407263 RGS1Q08116 209 aa9.77□□□□□ -0.85
TSPAN9-202ENST00000407263 CHAF1BQ13112 559 aa9.77□□□□□ -0.85
TSPAN9-202ENST00000407263 DDX39BQ13838 428 aaKnown RBP9.77□□□□□ -0.85
TSPAN9-202ENST00000407263 GTF2H2Q13888 395 aa9.77□□□□□ -0.85
TSPAN9-202ENST00000407263 DOC2AQ14183 400 aa9.77□□□□□ -0.85
TSPAN9-202ENST00000407263 NDUFA9Q16795 377 aa9.77□□□□□ -0.85
TSPAN9-202ENST00000407263 CPZQ66K79 652 aa9.77□□□□□ -0.85
TSPAN9-202ENST00000407263 TMEM214Q6NUQ4 689 aaKnown RBP9.77□□□□□ -0.85
TSPAN9-202ENST00000407263 GTF2H2CQ6P1K8 395 aa9.77□□□□□ -0.85
TSPAN9-202ENST00000407263 MRPL14Q6P1L8 145 aaKnown RBP9.77□□□□□ -0.85
TSPAN9-202ENST00000407263 TIFABQ6ZNK6 161 aa9.77□□□□□ -0.85
TSPAN9-202ENST00000407263 GOLGA7Q7Z5G4 137 aa9.77□□□□□ -0.85
TSPAN9-202ENST00000407263 TDRPQ86YL5 185 aa9.77□□□□□ -0.85
TSPAN9-202ENST00000407263 SHISA5Q8N114 240 aa9.77□□□□□ -0.85
TSPAN9-202ENST00000407263 AMER3Q8N944 861 aa9.77□□□□□ -0.85
TSPAN9-202ENST00000407263 SNRNP27Q8WVK2 155 aaKnown RBP9.77□□□□□ -0.85
TSPAN9-202ENST00000407263 FKBP10Q96AY3 582 aa9.77□□□□□ -0.85
TSPAN9-202ENST00000407263 PTCD3Q96EY7 689 aaKnown RBP9.77□□□□□ -0.85
TSPAN9-202ENST00000407263 NSUN5Q96P11 429 aaKnown RBP9.77□□□□□ -0.85
TSPAN9-202ENST00000407263 C17orf62Q9BQA9 187 aa9.77□□□□□ -0.85
TSPAN9-202ENST00000407263 MRPL57Q9BQC6 102 aaKnown RBP9.77□□□□□ -0.85
TSPAN9-202ENST00000407263 ZFP69BQ9UJL9 534 aa9.77□□□□□ -0.85
TSPAN9-202ENST00000407263 RAB21Q9UL25 225 aa9.77□□□□□ -0.85
TSPAN9-202ENST00000407263 MAN2B2Q9Y2E5 1009 aa9.77□□□□□ -0.85
TSPAN9-202ENST00000407263 MGAQ8IWI9 3026 aa9.77□□□□□ -0.85
TSPAN9-202ENST00000407263 ZFYVE26Q68DK2 2539 aa9.77□□□□□ -0.85
TSPAN9-202ENST00000407263 FAM208BQ5VWN6 2430 aa9.76□□□□□ -0.85
TSPAN9-202ENST00000407263 LOC400499M0QZD8 3231 aa9.76□□□□□ -0.85
TSPAN9-202ENST00000407263 E2F3O00716 465 aa9.76□□□□□ -0.85
TSPAN9-202ENST00000407263 PRPF4O43172 522 aaKnown RBP eCLIP9.76□□□□□ -0.857e-7■■■■□ 22.1
TSPAN9-202ENST00000407263 FOXS1O43638 330 aa9.76□□□□□ -0.85
TSPAN9-202ENST00000407263 ALOX12BO75342 701 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms