RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 NAA11Q9BSU3 229 aaPredicted RBP4.59□□□□□ -1.67
HMGB3P19-201ENST00000403971 RAVER2Q9HCJ3 691 aaKnown RBP4.59□□□□□ -1.67
HMGB3P19-201ENST00000403971 DPP3Q9NY33 737 aa4.59□□□□□ -1.67
HMGB3P19-201ENST00000403971 B3GAT1Q9P2W7 334 aa4.59□□□□□ -1.67
HMGB3P19-201ENST00000403971 IL17BQ9UHF5 180 aa4.59□□□□□ -1.67
HMGB3P19-201ENST00000403971 MTUS1Q9ULD2 1270 aa4.59□□□□□ -1.67
HMGB3P19-201ENST00000403971 ABT1Q9ULW3 272 aaKnown RBP4.59□□□□□ -1.67
HMGB3P19-201ENST00000403971 A0A1W2PRB8 838 aa4.58□□□□□ -1.68
HMGB3P19-201ENST00000403971 OR6C76A6NM76 312 aa4.58□□□□□ -1.68
HMGB3P19-201ENST00000403971 P2RY10O00398 339 aa4.58□□□□□ -1.68
HMGB3P19-201ENST00000403971 LAD1O00515 517 aa4.58□□□□□ -1.68
HMGB3P19-201ENST00000403971 GAPDHSO14556 408 aaPredicted RBP4.58□□□□□ -1.68
HMGB3P19-201ENST00000403971 PRKNO60260 465 aaPredicted RBP4.58□□□□□ -1.68
HMGB3P19-201ENST00000403971 ZNF500O60304 480 aaPredicted RBP4.58□□□□□ -1.68
HMGB3P19-201ENST00000403971 CNMDO75829 334 aa4.58□□□□□ -1.68
HMGB3P19-201ENST00000403971 KRT36O76013 467 aa4.58□□□□□ -1.68
HMGB3P19-201ENST00000403971 WDPCPO95876 746 aa4.58□□□□□ -1.68
HMGB3P19-201ENST00000403971 IGLV2-11P01706 119 aa4.58□□□□□ -1.68
HMGB3P19-201ENST00000403971 SMIM18P0DKX4 95 aa4.58□□□□□ -1.68
HMGB3P19-201ENST00000403971 PCGF2P35227 344 aa4.58□□□□□ -1.68
HMGB3P19-201ENST00000403971 MAP2K2P36507 400 aa4.58□□□□□ -1.68
HMGB3P19-201ENST00000403971 DCTP40126 519 aa4.58□□□□□ -1.68
HMGB3P19-201ENST00000403971 PRPHP41219 470 aa4.58□□□□□ -1.68
HMGB3P19-201ENST00000403971 MTHFRP42898 656 aa4.58□□□□□ -1.68
HMGB3P19-201ENST00000403971 SLC9A3P48764 834 aa4.58□□□□□ -1.68
HMGB3P19-201ENST00000403971 RAB28P51157 221 aa4.58□□□□□ -1.68
HMGB3P19-201ENST00000403971 ZNF75DP51815 510 aa4.58□□□□□ -1.68
HMGB3P19-201ENST00000403971 CDH11P55287 796 aa4.58□□□□□ -1.68
HMGB3P19-201ENST00000403971 SNAP25P60880 206 aa4.58□□□□□ -1.68
HMGB3P19-201ENST00000403971 RPS6P62753 249 aaKnown RBP4.58□□□□□ -1.68
HMGB3P19-201ENST00000403971 CX3CL1P78423 397 aa4.58□□□□□ -1.68
HMGB3P19-201ENST00000403971 PHLDA2Q53GA4 152 aa4.58□□□□□ -1.68
HMGB3P19-201ENST00000403971 ARMC4Q5T2S8 1044 aa4.58□□□□□ -1.68
HMGB3P19-201ENST00000403971 STPG1Q5TH74 334 aa4.58□□□□□ -1.68
HMGB3P19-201ENST00000403971 KRT39Q6A163 491 aa4.58□□□□□ -1.68
HMGB3P19-201ENST00000403971 FAM173BQ6P4H8 233 aa4.58□□□□□ -1.68
HMGB3P19-201ENST00000403971 TRIML1Q8N9V2 468 aa4.58□□□□□ -1.68
HMGB3P19-201ENST00000403971 LINC00301Q8NCQ3 95 aa4.58□□□□□ -1.68
HMGB3P19-201ENST00000403971 GPRC5AQ8NFJ5 357 aa4.58□□□□□ -1.68
HMGB3P19-201ENST00000403971 OR2T12Q8NG77 320 aa4.58□□□□□ -1.68
HMGB3P19-201ENST00000403971 TBCKQ8TEA7 893 aa4.58□□□□□ -1.68
HMGB3P19-201ENST00000403971 HDAC11Q96DB2 347 aa4.58□□□□□ -1.68
HMGB3P19-201ENST00000403971 CAPNS2Q96L46 248 aa4.58□□□□□ -1.68
HMGB3P19-201ENST00000403971 FER1L6-AS2Q96M78 137 aa4.58□□□□□ -1.68
HMGB3P19-201ENST00000403971 NODALQ96S42 347 aa4.58□□□□□ -1.68
HMGB3P19-201ENST00000403971 MYADMQ96S97 322 aa4.58□□□□□ -1.68
HMGB3P19-201ENST00000403971 SEPHS2Q99611 448 aa4.58□□□□□ -1.68
HMGB3P19-201ENST00000403971 NUP85Q9BW27 656 aa4.58□□□□□ -1.68
HMGB3P19-201ENST00000403971 ARRDC1-AS1Q9H2J1 176 aa4.58□□□□□ -1.68
HMGB3P19-201ENST00000403971 A4GALTQ9NPC4 353 aa4.58□□□□□ -1.68
HMGB3P19-201ENST00000403971 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.58□□□□□ -1.68
HMGB3P19-201ENST00000403971 RIPK3Q9Y572 518 aa4.58□□□□□ -1.68
HMGB3P19-201ENST00000403971 TCF20Q9UGU0 1960 aaKnown RBP4.58□□□□□ -1.68
HMGB3P19-201ENST00000403971 PRR32B1ATL7 298 aa4.57□□□□□ -1.68
HMGB3P19-201ENST00000403971 PRSS44E7EML9 344 aa4.57□□□□□ -1.68
HMGB3P19-201ENST00000403971 IKBKBO14920 756 aa4.57□□□□□ -1.68
HMGB3P19-201ENST00000403971 EDIL3O43854 480 aa4.57□□□□□ -1.68
HMGB3P19-201ENST00000403971 FGF17O60258 216 aa4.57□□□□□ -1.68
HMGB3P19-201ENST00000403971 STAM2O75886 525 aa4.57□□□□□ -1.68
HMGB3P19-201ENST00000403971 RAB40ALP0C0E4 278 aa4.57□□□□□ -1.68
HMGB3P19-201ENST00000403971 ACHEP22303 614 aa4.57□□□□□ -1.68
HMGB3P19-201ENST00000403971 CCR10P46092 362 aa4.57□□□□□ -1.68
HMGB3P19-201ENST00000403971 MAPK12P53778 367 aa4.57□□□□□ -1.68
HMGB3P19-201ENST00000403971 LINC01547P58512 204 aaPredicted RBP4.57□□□□□ -1.68
HMGB3P19-201ENST00000403971 UBE2HP62256 183 aa4.57□□□□□ -1.68
HMGB3P19-201ENST00000403971 ACSM1Q08AH1 577 aa4.57□□□□□ -1.68
HMGB3P19-201ENST00000403971 DMP1Q13316 513 aaPredicted RBP4.57□□□□□ -1.68
HMGB3P19-201ENST00000403971 PTPRCAPQ14761 206 aa4.57□□□□□ -1.68
HMGB3P19-201ENST00000403971 STK38Q15208 465 aa4.57□□□□□ -1.68
HMGB3P19-201ENST00000403971 UBE2SQ16763 222 aa4.57□□□□□ -1.68
HMGB3P19-201ENST00000403971 ACCSLQ4AC99 568 aa4.57□□□□□ -1.68
HMGB3P19-201ENST00000403971 ARMC3Q5W041 872 aa4.57□□□□□ -1.68
HMGB3P19-201ENST00000403971 C19orf48Q6RUI8 117 aa4.57□□□□□ -1.68
HMGB3P19-201ENST00000403971 LINGO4Q6UY18 593 aa4.57□□□□□ -1.68
HMGB3P19-201ENST00000403971 SLC26A9Q7LBE3 791 aa4.57□□□□□ -1.68
HMGB3P19-201ENST00000403971 NIPA1Q7RTP0 329 aa4.57□□□□□ -1.68
HMGB3P19-201ENST00000403971 PLD3Q8IV08 490 aa4.57□□□□□ -1.68
HMGB3P19-201ENST00000403971 DNAJC22Q8N4W6 341 aa4.57□□□□□ -1.68
HMGB3P19-201ENST00000403971 C4orf32Q8N8J7 132 aa4.57□□□□□ -1.68
HMGB3P19-201ENST00000403971 FAM133AQ8N9E0 248 aa4.57□□□□□ -1.68
HMGB3P19-201ENST00000403971 FCAMRQ8WWV6 532 aa4.57□□□□□ -1.68
HMGB3P19-201ENST00000403971 SYN2Q92777 582 aaPredicted RBP4.57□□□□□ -1.68
HMGB3P19-201ENST00000403971 ZNF653Q96CK0 615 aa4.57□□□□□ -1.68
HMGB3P19-201ENST00000403971 ARSGQ96EG1 525 aa4.57□□□□□ -1.68
HMGB3P19-201ENST00000403971 STAMBPL1Q96FJ0 436 aa4.57□□□□□ -1.68
HMGB3P19-201ENST00000403971 SGK494Q96LW2 274 aa4.57□□□□□ -1.68
HMGB3P19-201ENST00000403971 CFAP57Q96MR6 1250 aa4.57□□□□□ -1.68
HMGB3P19-201ENST00000403971 ZMAT2Q96NC0 199 aaKnown RBP4.57□□□□□ -1.68
HMGB3P19-201ENST00000403971 ZNF558Q96NG5 402 aa4.57□□□□□ -1.68
HMGB3P19-201ENST00000403971 IWS1Q96ST2 819 aa4.57□□□□□ -1.68
HMGB3P19-201ENST00000403971 RTP3Q9BQQ7 232 aa4.57□□□□□ -1.68
HMGB3P19-201ENST00000403971 S1PR5Q9H228 398 aa4.57□□□□□ -1.68
HMGB3P19-201ENST00000403971 MMP28Q9H239 520 aa4.57□□□□□ -1.68
HMGB3P19-201ENST00000403971 ZBTB20Q9HC78 741 aaPredicted RBP4.57□□□□□ -1.68
HMGB3P19-201ENST00000403971 SDF2L1Q9HCN8 221 aa4.57□□□□□ -1.68
HMGB3P19-201ENST00000403971 CYP39A1Q9NYL5 469 aa4.57□□□□□ -1.68
HMGB3P19-201ENST00000403971 ICAM5Q9UMF0 924 aa4.57□□□□□ -1.68
HMGB3P19-201ENST00000403971 ZSWIM8A7E2V4 1837 aa4.56□□□□□ -1.68
HMGB3P19-201ENST00000403971 ARID2Q68CP9 1835 aa4.56□□□□□ -1.68
HMGB3P19-201ENST00000403971 A0A1W2PPQ1 181 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 182.7 ms