RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 OR2AG1Q9H205 316 aa12.22□□□□□ -0.45
PPP4R1-202ENST00000400555 TM9SF3Q9HD45 589 aa12.22□□□□□ -0.45
PPP4R1-202ENST00000400555 CDH7Q9ULB5 785 aa12.22□□□□□ -0.45
PPP4R1-202ENST00000400555 ATG2BQ96BY7 2078 aa12.22□□□□□ -0.45
PPP4R1-202ENST00000400555 HPRP00739 348 aa12.22□□□□□ -0.45
PPP4R1-202ENST00000400555 BMP4P12644 408 aa12.22□□□□□ -0.45
PPP4R1-202ENST00000400555 GADD45AP24522 165 aa12.22□□□□□ -0.45
PPP4R1-202ENST00000400555 SLBPQ14493 270 aaKnown RBP eCLIP12.22□□□□□ -0.45
PPP4R1-202ENST00000400555 GPNMBQ14956 572 aa12.22□□□□□ -0.45
PPP4R1-202ENST00000400555 TRIM60Q495X7 471 aa12.22□□□□□ -0.45
PPP4R1-202ENST00000400555 LY6G5CQ5SRR4 150 aa12.22□□□□□ -0.45
PPP4R1-202ENST00000400555 SHQ1Q6PI26 577 aaKnown RBP12.22□□□□□ -0.45
PPP4R1-202ENST00000400555 GDPD4Q6W3E5 623 aa12.22□□□□□ -0.45
PPP4R1-202ENST00000400555 RNF130Q86XS8 419 aa12.22□□□□□ -0.45
PPP4R1-202ENST00000400555 MMP21Q8N119 569 aa12.22□□□□□ -0.45
PPP4R1-202ENST00000400555 ADAMTS16Q8TE57 1224 aa12.22□□□□□ -0.45
PPP4R1-202ENST00000400555 PHF10Q8WUB8 498 aaKnown RBP12.22□□□□□ -0.45
PPP4R1-202ENST00000400555 ASB11Q8WXH4 323 aa12.22□□□□□ -0.45
PPP4R1-202ENST00000400555 HEPHQ9BQS7 1158 aa12.22□□□□□ -0.45
PPP4R1-202ENST00000400555 SLC35A5Q9BS91 424 aa12.22□□□□□ -0.45
PPP4R1-202ENST00000400555 SLC12A9Q9BXP2 914 aa12.22□□□□□ -0.45
PPP4R1-202ENST00000400555 DDX28Q9NUL7 540 aaKnown RBP12.22□□□□□ -0.45
PPP4R1-202ENST00000400555 TRPC4Q9UBN4 977 aa12.22□□□□□ -0.45
PPP4R1-202ENST00000400555 ZNF639Q9UID6 485 aa12.22□□□□□ -0.45
PPP4R1-202ENST00000400555 CASP8AP2Q9UKL3 1982 aa12.22□□□□□ -0.45
PPP4R1-202ENST00000400555 SOD2P04179 222 aa12.22□□□□□ -0.45
PPP4R1-202ENST00000400555 C1SP09871 688 aa12.22□□□□□ -0.45
PPP4R1-202ENST00000400555 ALPPL2P10696 532 aa12.22□□□□□ -0.45
PPP4R1-202ENST00000400555 POLR2EP19388 210 aaKnown RBP12.22□□□□□ -0.45
PPP4R1-202ENST00000400555 MAPK8P45983 427 aa12.22□□□□□ -0.45
PPP4R1-202ENST00000400555 POLR2LP62875 67 aaKnown RBP12.22□□□□□ -0.45
PPP4R1-202ENST00000400555 DEFB103AP81534 67 aa12.22□□□□□ -0.45
PPP4R1-202ENST00000400555 SRSF11Q05519 484 aaKnown RBP12.22□□□□□ -0.45
PPP4R1-202ENST00000400555 LAIR2Q6ISS4 152 aa12.22□□□□□ -0.45
PPP4R1-202ENST00000400555 DEF8Q6ZN54 512 aa12.22□□□□□ -0.45
PPP4R1-202ENST00000400555 USP7Q93009 1102 aa12.22□□□□□ -0.45
PPP4R1-202ENST00000400555 EMILIN2Q9BXX0 1053 aa12.22□□□□□ -0.45
PPP4R1-202ENST00000400555 TMEM39AQ9NV64 488 aa12.22□□□□□ -0.45
PPP4R1-202ENST00000400555 RUVBL1Q9Y265 456 aaKnown RBP12.22□□□□□ -0.45
PPP4R1-202ENST00000400555 ZNF510Q9Y2H8 683 aa12.22□□□□□ -0.45
PPP4R1-202ENST00000400555 DYRK1BQ9Y463 629 aa12.22□□□□□ -0.45
PPP4R1-202ENST00000400555 CKMT1AP12532 417 aa12.21□□□□□ -0.45
PPP4R1-202ENST00000400555 TAS2R50P59544 299 aa12.21□□□□□ -0.45
PPP4R1-202ENST00000400555 GRIN2CQ14957 1233 aa12.21□□□□□ -0.45
PPP4R1-202ENST00000400555 GTF2IRD2BQ6EKJ0 949 aa12.21□□□□□ -0.45
PPP4R1-202ENST00000400555 RAET1GQ6H3X3 334 aa12.21□□□□□ -0.45
PPP4R1-202ENST00000400555 OLIG3Q7RTU3 272 aa12.21□□□□□ -0.45
PPP4R1-202ENST00000400555 LRRC70Q7Z2Q7 622 aa12.21□□□□□ -0.45
PPP4R1-202ENST00000400555 GTF2IRD2Q86UP8 949 aa12.21□□□□□ -0.45
PPP4R1-202ENST00000400555 FAM9CQ8IZT9 166 aa12.21□□□□□ -0.45
PPP4R1-202ENST00000400555 ZBTB8BQ8NAP8 495 aaPredicted RBP12.21□□□□□ -0.45
PPP4R1-202ENST00000400555 PPCDCQ96CD2 204 aa12.21□□□□□ -0.45
PPP4R1-202ENST00000400555 SLC46A2Q9BY10 475 aa12.21□□□□□ -0.45
PPP4R1-202ENST00000400555 RPS3P23396 243 aaKnown RBP eCLIP12.21□□□□□ -0.45
PPP4R1-202ENST00000400555 SLC16A12Q6ZSM3 486 aa12.21□□□□□ -0.45
PPP4R1-202ENST00000400555 TMEM150AQ86TG1 271 aa12.21□□□□□ -0.45
PPP4R1-202ENST00000400555 ZZZ3Q8IYH5 903 aa12.21□□□□□ -0.45
PPP4R1-202ENST00000400555 NEIL2Q969S2 332 aa12.21□□□□□ -0.45
PPP4R1-202ENST00000400555 OR51E2Q9H255 320 aa12.21□□□□□ -0.45
PPP4R1-202ENST00000400555 TRIT1Q9H3H1 467 aaKnown RBP12.21□□□□□ -0.45
PPP4R1-202ENST00000400555 OSGEPL1Q9H4B0 414 aa12.21□□□□□ -0.45
PPP4R1-202ENST00000400555 CWH43Q9H720 699 aa12.21□□□□□ -0.45
PPP4R1-202ENST00000400555 ASAH2Q9NR71 780 aa12.21□□□□□ -0.45
PPP4R1-202ENST00000400555 ASF1AQ9Y294 204 aa12.21□□□□□ -0.45
PPP4R1-202ENST00000400555 OR51B4Q9Y5P0 310 aa12.21□□□□□ -0.45
PPP4R1-202ENST00000400555 CNOT3O75175 753 aaKnown RBP12.21□□□□□ -0.46
PPP4R1-202ENST00000400555 PABPC1P11940 636 aaKnown RBP12.21□□□□□ -0.46
PPP4R1-202ENST00000400555 TYRP14679 529 aa12.21□□□□□ -0.46
PPP4R1-202ENST00000400555 TNNI3P19429 210 aa12.21□□□□□ -0.46
PPP4R1-202ENST00000400555 CD22P20273 847 aa12.21□□□□□ -0.46
PPP4R1-202ENST00000400555 HTRA3P83110 453 aa12.21□□□□□ -0.46
PPP4R1-202ENST00000400555 UBE3AQ05086 875 aa12.21□□□□□ -0.46
PPP4R1-202ENST00000400555 GRSF1Q12849 480 aaKnown RBP eCLIP12.21□□□□□ -0.46
PPP4R1-202ENST00000400555 HSPB3Q12988 150 aa12.21□□□□□ -0.46
PPP4R1-202ENST00000400555 CSTF3Q12996 717 aaKnown RBP12.21□□□□□ -0.46
PPP4R1-202ENST00000400555 GAB1Q13480 694 aa12.21□□□□□ -0.46
PPP4R1-202ENST00000400555 MAD2L1BPQ15013 274 aaPredicted RBP12.21□□□□□ -0.46
PPP4R1-202ENST00000400555 CTF1Q16619 201 aa12.21□□□□□ -0.46
PPP4R1-202ENST00000400555 EXOC3L2Q2M3D2 409 aa12.21□□□□□ -0.46
PPP4R1-202ENST00000400555 PLPP4Q5VZY2 271 aa12.21□□□□□ -0.46
PPP4R1-202ENST00000400555 ALDH16A1Q8IZ83 802 aa12.21□□□□□ -0.46
PPP4R1-202ENST00000400555 OR7G3Q8NG95 312 aa12.21□□□□□ -0.46
PPP4R1-202ENST00000400555 CCDC115Q96NT0 180 aa12.21□□□□□ -0.46
PPP4R1-202ENST00000400555 SAMD11Q96NU1 681 aa12.21□□□□□ -0.46
PPP4R1-202ENST00000400555 YIPF4Q9BSR8 244 aa12.21□□□□□ -0.46
PPP4R1-202ENST00000400555 NUAK2Q9H093 628 aa12.21□□□□□ -0.46
PPP4R1-202ENST00000400555 C14orf119Q9NWQ9 140 aa12.21□□□□□ -0.46
PPP4R1-202ENST00000400555 ERVK-11Q9UQG0 969 aa12.21□□□□□ -0.46
PPP4R1-202ENST00000400555 TFECO14948 347 aaPredicted RBP12.2□□□□□ -0.46
PPP4R1-202ENST00000400555 C9P02748 559 aa12.2□□□□□ -0.46
PPP4R1-202ENST00000400555 CSNK1DP48730 415 aa12.2□□□□□ -0.46
PPP4R1-202ENST00000400555 KLHL17Q6TDP4 642 aa12.2□□□□□ -0.46
PPP4R1-202ENST00000400555 PTCHD4Q6ZW05 846 aa12.2□□□□□ -0.46
PPP4R1-202ENST00000400555 NPAS3Q8IXF0 933 aa12.2□□□□□ -0.46
PPP4R1-202ENST00000400555 ADAMTS19Q8TE59 1207 aa12.2□□□□□ -0.46
PPP4R1-202ENST00000400555 TMEM203Q969S6 136 aa12.2□□□□□ -0.46
PPP4R1-202ENST00000400555 ALG14Q96F25 216 aa12.2□□□□□ -0.46
PPP4R1-202ENST00000400555 ABHD8Q96I13 439 aa12.2□□□□□ -0.46
PPP4R1-202ENST00000400555 WDR12Q9GZL7 423 aaKnown RBP12.2□□□□□ -0.46
PPP4R1-202ENST00000400555 ARID1BQ8NFD5 2236 aaPredicted RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms