RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 TM4SF19Q96DZ7 209 aa12.71□□□□□ -0.37
VCX3A-202ENST00000398729 C19orf60Q96EN9 201 aa12.71□□□□□ -0.37
VCX3A-202ENST00000398729 VPS39Q96JC1 886 aa12.71□□□□□ -0.37
VCX3A-202ENST00000398729 MESP1Q9BRJ9 268 aa12.71□□□□□ -0.37
VCX3A-202ENST00000398729 ERP44Q9BS26 406 aa12.71□□□□□ -0.37
VCX3A-202ENST00000398729 WHRNQ9P202 907 aa12.71□□□□□ -0.37
VCX3A-202ENST00000398729 ERRFI1Q9UJM3 462 aaPredicted RBP12.71□□□□□ -0.37
VCX3A-202ENST00000398729 MKL2Q9ULH7 1088 aa12.71□□□□□ -0.37
VCX3A-202ENST00000398729 NOVA2Q9UNW9 492 aaKnown RBP12.71□□□□□ -0.37
VCX3A-202ENST00000398729 MRPS2Q9Y399 296 aaKnown RBP12.71□□□□□ -0.37
VCX3A-202ENST00000398729 A0A1W2PQ72 361 aa12.7□□□□□ -0.38
VCX3A-202ENST00000398729 LCMT2O60294 686 aaKnown RBP12.7□□□□□ -0.38
VCX3A-202ENST00000398729 BMP10O95393 424 aa12.7□□□□□ -0.38
VCX3A-202ENST00000398729 LDLRP01130 860 aa12.7□□□□□ -0.38
VCX3A-202ENST00000398729 SLC35G6P0C7Q6 338 aa12.7□□□□□ -0.38
VCX3A-202ENST00000398729 COX6A1P12074 109 aa12.7□□□□□ -0.38
VCX3A-202ENST00000398729 POU3F2P20265 443 aaPredicted RBP12.7□□□□□ -0.38
VCX3A-202ENST00000398729 GLRBP48167 497 aa12.7□□□□□ -0.38
VCX3A-202ENST00000398729 EEF1A2Q05639 463 aaKnown RBP12.7□□□□□ -0.38
VCX3A-202ENST00000398729 ZXDCQ2QGD7 858 aaPredicted RBP12.7□□□□□ -0.38
VCX3A-202ENST00000398729 FAAH2Q6GMR7 532 aa12.7□□□□□ -0.38
VCX3A-202ENST00000398729 SBSNQ6UWP8 590 aa12.7□□□□□ -0.38
VCX3A-202ENST00000398729 IGFL2Q6UWQ7 119 aa12.7□□□□□ -0.38
VCX3A-202ENST00000398729 TMEM207Q6UWW9 146 aa12.7□□□□□ -0.38
VCX3A-202ENST00000398729 ISLR2Q6UXK2 745 aa12.7□□□□□ -0.38
VCX3A-202ENST00000398729 CAPN12Q6ZSI9 719 aa12.7□□□□□ -0.38
VCX3A-202ENST00000398729 TICAM1Q8IUC6 712 aa12.7□□□□□ -0.38
VCX3A-202ENST00000398729 KBTBD2Q8IY47 623 aa12.7□□□□□ -0.38
VCX3A-202ENST00000398729 CISD2Q8N5K1 135 aaKnown RBP12.7□□□□□ -0.38
VCX3A-202ENST00000398729 MFSD9Q8NBP5 474 aa12.7□□□□□ -0.38
VCX3A-202ENST00000398729 ABHD11Q8NFV4 315 aa12.7□□□□□ -0.38
VCX3A-202ENST00000398729 PRR7Q8TB68 274 aa12.7□□□□□ -0.38
VCX3A-202ENST00000398729 ZCCHC10Q8TBK6 192 aa12.7□□□□□ -0.38
VCX3A-202ENST00000398729 SLC13A3Q8WWT9 602 aa12.7□□□□□ -0.38
VCX3A-202ENST00000398729 METTL21AQ8WXB1 218 aa12.7□□□□□ -0.38
VCX3A-202ENST00000398729 CDKL2Q92772 493 aa12.7□□□□□ -0.38
VCX3A-202ENST00000398729 LMF1Q96S06 567 aa12.7□□□□□ -0.38
VCX3A-202ENST00000398729 MACROD1Q9BQ69 325 aa12.7□□□□□ -0.38
VCX3A-202ENST00000398729 DPH5Q9H2P9 285 aa12.7□□□□□ -0.38
VCX3A-202ENST00000398729 RHOJQ9H4E5 214 aa12.7□□□□□ -0.38
VCX3A-202ENST00000398729 ANKHQ9HCJ1 492 aa12.7□□□□□ -0.38
VCX3A-202ENST00000398729 RIC8BQ9NVN3 520 aa12.7□□□□□ -0.38
VCX3A-202ENST00000398729 DIDO1Q9BTC0 2240 aaKnown RBP12.7□□□□□ -0.38
VCX3A-202ENST00000398729 PDZD2O15018 2839 aa12.69□□□□□ -0.38
VCX3A-202ENST00000398729 LOC102723996A0A087X1L8 192 aa12.69□□□□□ -0.38
VCX3A-202ENST00000398729 IGHV1-45A0A0A0MS14 117 aa12.69□□□□□ -0.38
VCX3A-202ENST00000398729 TRBC2A0A5B9 178 aa12.69□□□□□ -0.38
VCX3A-202ENST00000398729 EIF3HO15372 352 aaKnown RBP eCLIP12.69□□□□□ -0.38
VCX3A-202ENST00000398729 RAD51CO43502 376 aa12.69□□□□□ -0.38
VCX3A-202ENST00000398729 OR1F1O43749 312 aa12.69□□□□□ -0.38
VCX3A-202ENST00000398729 CYC1P08574 325 aa12.69□□□□□ -0.38
VCX3A-202ENST00000398729 C8orf89P0DMQ9 161 aa12.69□□□□□ -0.38
VCX3A-202ENST00000398729 IL1RNP18510 177 aa12.69□□□□□ -0.38
VCX3A-202ENST00000398729 SLC12A2P55011 1212 aa12.69□□□□□ -0.38
VCX3A-202ENST00000398729 TAS2R39P59534 338 aa12.69□□□□□ -0.38
VCX3A-202ENST00000398729 ETF1P62495 437 aaKnown RBP12.69□□□□□ -0.38
VCX3A-202ENST00000398729 AP2B1P63010 937 aa12.69□□□□□ -0.38
VCX3A-202ENST00000398729 C2orf54Q08AI8 447 aa12.69□□□□□ -0.38
VCX3A-202ENST00000398729 MFAP5Q13361 173 aa12.69□□□□□ -0.38
VCX3A-202ENST00000398729 CSHL1Q14406 222 aa12.69□□□□□ -0.38
VCX3A-202ENST00000398729 ZNF460Q14592 562 aa12.69□□□□□ -0.38
VCX3A-202ENST00000398729 PPP1R3AQ16821 1122 aa12.69□□□□□ -0.38
VCX3A-202ENST00000398729 CRB2Q5IJ48 1285 aa12.69□□□□□ -0.38
VCX3A-202ENST00000398729 MFSD4BQ5TF39 518 aa12.69□□□□□ -0.38
VCX3A-202ENST00000398729 RIPOR1Q6ZS17 1223 aa12.69□□□□□ -0.38
VCX3A-202ENST00000398729 PRSS41Q7RTY9 318 aa12.69□□□□□ -0.38
VCX3A-202ENST00000398729 CUZD1Q86UP6 607 aa12.69□□□□□ -0.38
VCX3A-202ENST00000398729 KCT2Q8NC54 265 aa12.69□□□□□ -0.38
VCX3A-202ENST00000398729 OR4K1Q8NGD4 311 aa12.69□□□□□ -0.38
VCX3A-202ENST00000398729 OR51Q1Q8NH59 317 aa12.69□□□□□ -0.38
VCX3A-202ENST00000398729 DNAJB14Q8TBM8 379 aa12.69□□□□□ -0.38
VCX3A-202ENST00000398729 CNDP1Q96KN2 507 aa12.69□□□□□ -0.38
VCX3A-202ENST00000398729 OR4K3Q96R72 315 aa12.69□□□□□ -0.38
VCX3A-202ENST00000398729 EGFL8Q99944 293 aa12.69□□□□□ -0.38
VCX3A-202ENST00000398729 SARGQ9BW04 601 aa12.69□□□□□ -0.38
VCX3A-202ENST00000398729 SAYSD1Q9NPB0 183 aa12.69□□□□□ -0.38
VCX3A-202ENST00000398729 ASF1BQ9NVP2 202 aa12.69□□□□□ -0.38
VCX3A-202ENST00000398729 TXNDC16Q9P2K2 825 aa12.69□□□□□ -0.38
VCX3A-202ENST00000398729 IKZF3Q9UKT9 509 aa12.69□□□□□ -0.38
VCX3A-202ENST00000398729 UTP11Q9Y3A2 253 aaKnown RBP12.69□□□□□ -0.38
VCX3A-202ENST00000398729 DYRK1BQ9Y463 629 aa12.69□□□□□ -0.38
VCX3A-202ENST00000398729 PCDHGA10Q9Y5H3 936 aa12.69□□□□□ -0.38
VCX3A-202ENST00000398729 CSAG2Q9Y5P2 127 aa12.69□□□□□ -0.38
VCX3A-202ENST00000398729 COPG1Q9Y678 874 aaKnown RBP12.69□□□□□ -0.38
VCX3A-202ENST00000398729 SLC22A7Q9Y694 548 aa12.69□□□□□ -0.38
VCX3A-202ENST00000398729 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.69□□□□□ -0.38
VCX3A-202ENST00000398729 TACC2O95359 2948 aa12.68□□□□□ -0.38
VCX3A-202ENST00000398729 NPEPPSL1A6NEC2 478 aa12.68□□□□□ -0.38
VCX3A-202ENST00000398729 SGK494L7N484 410 aa12.68□□□□□ -0.38
VCX3A-202ENST00000398729 CDC7O00311 574 aa12.68□□□□□ -0.38
VCX3A-202ENST00000398729 NDUFS4O43181 175 aa12.68□□□□□ -0.38
VCX3A-202ENST00000398729 CBX6O95503 412 aa12.68□□□□□ -0.38
VCX3A-202ENST00000398729 SERPINA7P05543 415 aa12.68□□□□□ -0.38
VCX3A-202ENST00000398729 UQCRHP07919 91 aa12.68□□□□□ -0.38
VCX3A-202ENST00000398729 PRR35P0CG20 571 aa12.68□□□□□ -0.38
VCX3A-202ENST00000398729 ICAM2P13598 275 aa12.68□□□□□ -0.38
VCX3A-202ENST00000398729 SSTR1P30872 391 aa12.68□□□□□ -0.38
VCX3A-202ENST00000398729 XCR1P46094 333 aa12.68□□□□□ -0.38
VCX3A-202ENST00000398729 SNRPNP63162 240 aaKnown RBP12.68□□□□□ -0.38
VCX3A-202ENST00000398729 SKP1P63208 163 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 330.9 ms