RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 P2RY13Q9BPV8 354 aa13.76□□□□□ -0.21
PCDHGA11-201ENST00000398587 PLAGL1Q9UM63 463 aa13.76□□□□□ -0.21
PCDHGA11-201ENST00000398587 KIAA0100Q14667 2235 aaKnown RBP13.76□□□□□ -0.21
PCDHGA11-201ENST00000398587 PRAMEF12O95522 483 aa13.76□□□□□ -0.21
PCDHGA11-201ENST00000398587 TIMP1P01033 207 aa13.76□□□□□ -0.21
PCDHGA11-201ENST00000398587 FGF4P08620 206 aa13.76□□□□□ -0.21
PCDHGA11-201ENST00000398587 GRK6P43250 576 aa13.76□□□□□ -0.21
PCDHGA11-201ENST00000398587 RPS21P63220 83 aaKnown RBP13.76□□□□□ -0.21
PCDHGA11-201ENST00000398587 GSTM4Q03013 218 aa13.76□□□□□ -0.21
PCDHGA11-201ENST00000398587 KANK2Q63ZY3 851 aa13.76□□□□□ -0.21
PCDHGA11-201ENST00000398587 GALNT15Q8N3T1 639 aa13.76□□□□□ -0.21
PCDHGA11-201ENST00000398587 TRIM63Q969Q1 353 aa13.76□□□□□ -0.21
PCDHGA11-201ENST00000398587 ZNF354BQ96LW1 612 aa13.76□□□□□ -0.21
PCDHGA11-201ENST00000398587 KLF16Q9BXK1 252 aaPredicted RBP13.76□□□□□ -0.21
PCDHGA11-201ENST00000398587 CDC14AQ9UNH5 594 aa13.76□□□□□ -0.21
PCDHGA11-201ENST00000398587 GCAP28676 217 aa13.76□□□□□ -0.21
PCDHGA11-201ENST00000398587 SDC2P34741 201 aa13.76□□□□□ -0.21
PCDHGA11-201ENST00000398587 SHMT2P34897 504 aa13.76□□□□□ -0.21
PCDHGA11-201ENST00000398587 PGDP52209 483 aa13.76□□□□□ -0.21
PCDHGA11-201ENST00000398587 IL18R1Q13478 541 aa13.76□□□□□ -0.21
PCDHGA11-201ENST00000398587 DOC2AQ14183 400 aa13.76□□□□□ -0.21
PCDHGA11-201ENST00000398587 REEP3Q6NUK4 255 aa13.76□□□□□ -0.21
PCDHGA11-201ENST00000398587 POLR2J2Q9GZM3 115 aaKnown RBP13.76□□□□□ -0.21
PCDHGA11-201ENST00000398587 IL26Q9NPH9 171 aa13.76□□□□□ -0.21
PCDHGA11-201ENST00000398587 OAS3Q9Y6K5 1087 aaKnown RBP13.76□□□□□ -0.21
PCDHGA11-201ENST00000398587 TNRC6CQ9HCJ0 1690 aaKnown RBP13.76□□□□□ -0.21
PCDHGA11-201ENST00000398587 LOC285095A0A1B0GVY8 99 aa13.76□□□□□ -0.21
PCDHGA11-201ENST00000398587 DIRAS1O95057 198 aa13.76□□□□□ -0.21
PCDHGA11-201ENST00000398587 ALPPL2P10696 532 aa13.76□□□□□ -0.21
PCDHGA11-201ENST00000398587 HOXD8P13378 290 aaPredicted RBP13.76□□□□□ -0.21
PCDHGA11-201ENST00000398587 CCNIQ14094 377 aa13.76□□□□□ -0.21
PCDHGA11-201ENST00000398587 FBXO15Q8NCQ5 510 aaPredicted RBP13.76□□□□□ -0.21
PCDHGA11-201ENST00000398587 OR10Q1Q8NGQ4 319 aa13.76□□□□□ -0.21
PCDHGA11-201ENST00000398587 SLC39A13Q96H72 371 aa13.76□□□□□ -0.21
PCDHGA11-201ENST00000398587 MAPKAP1Q9BPZ7 522 aa13.76□□□□□ -0.21
PCDHGA11-201ENST00000398587 BOCQ9BWV1 1114 aa13.76□□□□□ -0.21
PCDHGA11-201ENST00000398587 SATB2Q9UPW6 733 aa13.76□□□□□ -0.21
PCDHGA11-201ENST00000398587 GON4LQ3T8J9 2241 aa13.76□□□□□ -0.21
PCDHGA11-201ENST00000398587 DDX60LQ5H9U9 1706 aaKnown RBP13.75□□□□□ -0.21
PCDHGA11-201ENST00000398587 B4DGG1 531 aa13.75□□□□□ -0.21
PCDHGA11-201ENST00000398587 SNPHO15079 494 aa13.75□□□□□ -0.21
PCDHGA11-201ENST00000398587 GRIA2P42262 883 aa13.75□□□□□ -0.21
PCDHGA11-201ENST00000398587 MEF2AQ02078 507 aaPredicted RBP13.75□□□□□ -0.21
PCDHGA11-201ENST00000398587 DSC1Q08554 894 aa13.75□□□□□ -0.21
PCDHGA11-201ENST00000398587 IKBIPQ70UQ0 350 aa13.75□□□□□ -0.21
PCDHGA11-201ENST00000398587 ADGRD2Q7Z7M1 963 aa13.75□□□□□ -0.21
PCDHGA11-201ENST00000398587 KCNC2Q96PR1 638 aa13.75□□□□□ -0.21
PCDHGA11-201ENST00000398587 FAM83CQ9BQN1 747 aa13.75□□□□□ -0.21
PCDHGA11-201ENST00000398587 IFT27Q9BW83 186 aa13.75□□□□□ -0.21
PCDHGA11-201ENST00000398587 ETAA1Q9NY74 926 aa13.75□□□□□ -0.21
PCDHGA11-201ENST00000398587 ACTL7AQ9Y615 435 aa13.75□□□□□ -0.21
PCDHGA11-201ENST00000398587 LAMB1P07942 1786 aa13.75□□□□□ -0.21
PCDHGA11-201ENST00000398587 H7C0S8 307 aa13.75□□□□□ -0.21
PCDHGA11-201ENST00000398587 SLC6A4P31645 630 aa13.75□□□□□ -0.21
PCDHGA11-201ENST00000398587 CLDN8P56748 225 aa13.75□□□□□ -0.21
PCDHGA11-201ENST00000398587 PCBP2Q15366 365 aaKnown RBP eCLIP13.75□□□□□ -0.215e-7■■■■□ 25.7
PCDHGA11-201ENST00000398587 SLC14A2Q15849 920 aa13.75□□□□□ -0.21
PCDHGA11-201ENST00000398587 DDI2Q5TDH0 399 aa13.75□□□□□ -0.21
PCDHGA11-201ENST00000398587 ANKRD26P1Q6NSI1 321 aa13.75□□□□□ -0.21
PCDHGA11-201ENST00000398587 PLET1Q6UQ28 207 aa13.75□□□□□ -0.21
PCDHGA11-201ENST00000398587 TMCO2Q7Z6W1 182 aaPredicted RBP13.75□□□□□ -0.21
PCDHGA11-201ENST00000398587 PRSS58Q8IYP2 241 aa13.75□□□□□ -0.21
PCDHGA11-201ENST00000398587 FAR1Q8WVX9 515 aa13.75□□□□□ -0.21
PCDHGA11-201ENST00000398587 ZNF689Q96CS4 500 aaPredicted RBP13.75□□□□□ -0.21
PCDHGA11-201ENST00000398587 DIRAS2Q96HU8 199 aa13.75□□□□□ -0.21
PCDHGA11-201ENST00000398587 TAS2R9Q9NYW1 312 aa13.75□□□□□ -0.21
PCDHGA11-201ENST00000398587 PCDHGA2Q9Y5H1 932 aa13.75□□□□□ -0.21
PCDHGA11-201ENST00000398587 WWP2O00308 870 aa13.75□□□□□ -0.21
PCDHGA11-201ENST00000398587 CD36P16671 472 aa13.75□□□□□ -0.21
PCDHGA11-201ENST00000398587 KCNC4Q03721 635 aa13.75□□□□□ -0.21
PCDHGA11-201ENST00000398587 RBBP4Q09028 425 aa13.75□□□□□ -0.21
PCDHGA11-201ENST00000398587 GPR68Q15743 365 aa13.75□□□□□ -0.21
PCDHGA11-201ENST00000398587 ATP6AP1Q15904 470 aa13.75□□□□□ -0.21
PCDHGA11-201ENST00000398587 TIGD6Q17RP2 521 aa13.75□□□□□ -0.21
PCDHGA11-201ENST00000398587 VMACQ2NL98 169 aa13.75□□□□□ -0.21
PCDHGA11-201ENST00000398587 ZNF648Q5T619 568 aaPredicted RBP13.75□□□□□ -0.21
PCDHGA11-201ENST00000398587 ERI1Q8IV48 349 aaKnown RBP13.75□□□□□ -0.21
PCDHGA11-201ENST00000398587 CNTN4Q8IWV2 1026 aa13.75□□□□□ -0.21
PCDHGA11-201ENST00000398587 KRTCAP2Q8N6L1 136 aa13.75□□□□□ -0.21
PCDHGA11-201ENST00000398587 CD200R1Q8TD46 325 aa13.75□□□□□ -0.21
PCDHGA11-201ENST00000398587 SETD7Q8WTS6 366 aaKnown RBP13.75□□□□□ -0.21
PCDHGA11-201ENST00000398587 PPP1R14AQ96A00 147 aa13.75□□□□□ -0.21
PCDHGA11-201ENST00000398587 PTERQ96BW5 349 aa13.75□□□□□ -0.21
PCDHGA11-201ENST00000398587 TRMT2BQ96GJ1 504 aaKnown RBP13.75□□□□□ -0.21
PCDHGA11-201ENST00000398587 OR51V1Q9H2C8 321 aa13.75□□□□□ -0.21
PCDHGA11-201ENST00000398587 KCNN2Q9H2S1 579 aa13.75□□□□□ -0.21
PCDHGA11-201ENST00000398587 TUBA8Q9NY65 449 aaPredicted RBP13.75□□□□□ -0.21
PCDHGA11-201ENST00000398587 A0A1W2PP55 124 aa13.75□□□□□ -0.21
PCDHGA11-201ENST00000398587 SLC22A1O15245 554 aa13.75□□□□□ -0.21
PCDHGA11-201ENST00000398587 OMPP47874 163 aa13.75□□□□□ -0.21
PCDHGA11-201ENST00000398587 SMARCD3Q6STE5 483 aa13.75□□□□□ -0.21
PCDHGA11-201ENST00000398587 CHST14Q8NCH0 376 aa13.75□□□□□ -0.21
PCDHGA11-201ENST00000398587 ARRDC2Q8TBH0 407 aa13.75□□□□□ -0.21
PCDHGA11-201ENST00000398587 NT5C3BQ969T7 300 aa13.75□□□□□ -0.21
PCDHGA11-201ENST00000398587 OR2M4Q96R27 311 aa13.75□□□□□ -0.21
PCDHGA11-201ENST00000398587 CLSTN3Q9BQT9 956 aa13.75□□□□□ -0.21
PCDHGA11-201ENST00000398587 GSTO2Q9H4Y5 243 aa13.75□□□□□ -0.21
PCDHGA11-201ENST00000398587 WBP11Q9Y2W2 641 aaKnown RBP13.75□□□□□ -0.21
PCDHGA11-201ENST00000398587 TNFRSF21O75509 655 aa13.74□□□□□ -0.21
PCDHGA11-201ENST00000398587 FESP07332 822 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms