RNA–Protein interactions for RNA: ENST00000398035.6

COLCA2-201, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best) BASIC

Gene COLCA2, Length 1,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-201ENST00000398035 FOXS1O43638 330 aa17.88■□□□□ 0.45
COLCA2-201ENST00000398035 KLHL41O60662 606 aa17.88■□□□□ 0.45
COLCA2-201ENST00000398035 SUPT3HO75486 399 aa17.88■□□□□ 0.45
COLCA2-201ENST00000398035 HSPA7P48741 367 aa17.88■□□□□ 0.45
COLCA2-201ENST00000398035 REEP5Q00765 189 aa17.88■□□□□ 0.45
COLCA2-201ENST00000398035 LAPTM5Q13571 262 aa17.88■□□□□ 0.45
COLCA2-201ENST00000398035 RBBP5Q15291 538 aaKnown RBP17.88■□□□□ 0.45
COLCA2-201ENST00000398035 HIST2H2ACQ16777 129 aaPredicted RBP17.88■□□□□ 0.45
COLCA2-201ENST00000398035 HIST2H2AA3Q6FI13 130 aa17.88■□□□□ 0.45
COLCA2-201ENST00000398035 TIFABQ6ZNK6 161 aa17.88■□□□□ 0.45
COLCA2-201ENST00000398035 SLCO4C1Q6ZQN7 724 aa17.88■□□□□ 0.45
COLCA2-201ENST00000398035 LRRC70Q7Z2Q7 622 aa17.88■□□□□ 0.45
COLCA2-201ENST00000398035 LCA5Q86VQ0 697 aa17.88■□□□□ 0.45
COLCA2-201ENST00000398035 STT3BQ8TCJ2 826 aa17.88■□□□□ 0.45
COLCA2-201ENST00000398035 TMEM79Q9BSE2 394 aa17.88■□□□□ 0.45
COLCA2-201ENST00000398035 TGIF2Q9GZN2 237 aa17.88■□□□□ 0.45
COLCA2-201ENST00000398035 ING2Q9H160 280 aa17.88■□□□□ 0.45
COLCA2-201ENST00000398035 CLK4Q9HAZ1 481 aaKnown RBP17.88■□□□□ 0.45
COLCA2-201ENST00000398035 C14orf105Q9NVL8 296 aa17.88■□□□□ 0.45
COLCA2-201ENST00000398035 TRPC4Q9UBN4 977 aa17.88■□□□□ 0.45
COLCA2-201ENST00000398035 TMCO1Q9UM00 188 aa17.88■□□□□ 0.45
COLCA2-201ENST00000398035 A0A0A6YYC8 382 aaPredicted RBP17.87■□□□□ 0.45
COLCA2-201ENST00000398035 TRIM49D1C9J1S8 452 aa17.87■□□□□ 0.45
COLCA2-201ENST00000398035 I3L1I5 382 aaPredicted RBP17.87■□□□□ 0.45
COLCA2-201ENST00000398035 NDUFS4O43181 175 aa17.87■□□□□ 0.45
COLCA2-201ENST00000398035 CCNT2O60583 730 aaKnown RBP17.87■□□□□ 0.45
COLCA2-201ENST00000398035 SLU7O95391 586 aaKnown RBP17.87■□□□□ 0.45
COLCA2-201ENST00000398035 MED26O95402 600 aa17.87■□□□□ 0.45
COLCA2-201ENST00000398035 ZGLP1P0C6A0 271 aa17.87■□□□□ 0.45
COLCA2-201ENST00000398035 ATXN8OSP0DMR3 200 aa17.87■□□□□ 0.45
COLCA2-201ENST00000398035 OTX2P32243 289 aa17.87■□□□□ 0.45
COLCA2-201ENST00000398035 ALDH18A1P54886 795 aaKnown RBP17.87■□□□□ 0.45
COLCA2-201ENST00000398035 IRF9Q00978 393 aa17.87■□□□□ 0.45
COLCA2-201ENST00000398035 MEF2AQ02078 507 aaPredicted RBP17.87■□□□□ 0.45
COLCA2-201ENST00000398035 C19orf57Q0VDD7 668 aa17.87■□□□□ 0.45
COLCA2-201ENST00000398035 TBCCQ15814 346 aa17.87■□□□□ 0.45
COLCA2-201ENST00000398035 C18orf21Q32NC0 220 aaPredicted RBP17.87■□□□□ 0.45
COLCA2-201ENST00000398035 PAGE2BQ5JRK9 111 aa17.87■□□□□ 0.45
COLCA2-201ENST00000398035 TMIGD1Q6UXZ0 262 aa17.87■□□□□ 0.45
COLCA2-201ENST00000398035 COX15Q7KZN9 410 aa17.87■□□□□ 0.45
COLCA2-201ENST00000398035 ABHD13Q7L211 337 aa17.87■□□□□ 0.45
COLCA2-201ENST00000398035 METTL27Q8N6F8 245 aaPredicted RBP17.87■□□□□ 0.45
COLCA2-201ENST00000398035 SNX31Q8N9S9 440 aa17.87■□□□□ 0.45
COLCA2-201ENST00000398035 NT5CQ8TCD5 201 aa17.87■□□□□ 0.45
COLCA2-201ENST00000398035 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.87■□□□□ 0.45
COLCA2-201ENST00000398035 PTCD3Q96EY7 689 aaKnown RBP17.87■□□□□ 0.45
COLCA2-201ENST00000398035 GPR78Q96P69 363 aa17.87■□□□□ 0.45
COLCA2-201ENST00000398035 SPSB2Q99619 263 aa17.87■□□□□ 0.45
COLCA2-201ENST00000398035 EFCAB11Q9BUY7 163 aa17.87■□□□□ 0.45
COLCA2-201ENST00000398035 YIPF2Q9BWQ6 316 aa17.87■□□□□ 0.45
COLCA2-201ENST00000398035 SYNPO2LQ9H987 977 aa17.87■□□□□ 0.45
COLCA2-201ENST00000398035 OPTCQ9UBM4 332 aa17.87■□□□□ 0.45
COLCA2-201ENST00000398035 CNOT3O75175 753 aaKnown RBP17.86■□□□□ 0.45
COLCA2-201ENST00000398035 SERPINA6P08185 405 aa17.86■□□□□ 0.45
COLCA2-201ENST00000398035 GFAPP14136 432 aa17.86■□□□□ 0.45
COLCA2-201ENST00000398035 EPB42P16452 691 aa17.86■□□□□ 0.45
COLCA2-201ENST00000398035 IL10P22301 178 aa17.86■□□□□ 0.45
COLCA2-201ENST00000398035 CASP2P42575 452 aa17.86■□□□□ 0.45
COLCA2-201ENST00000398035 GLRBP48167 497 aa17.86■□□□□ 0.45
COLCA2-201ENST00000398035 PCDH1Q08174 1060 aa17.86■□□□□ 0.45
COLCA2-201ENST00000398035 KCT2Q8NC54 265 aa17.86■□□□□ 0.45
COLCA2-201ENST00000398035 ZNF740Q8NDX6 193 aa17.86■□□□□ 0.45
COLCA2-201ENST00000398035 C9orf43Q8TAL5 461 aaPredicted RBP17.86■□□□□ 0.45
COLCA2-201ENST00000398035 UBTD2Q8WUN7 234 aa17.86■□□□□ 0.45
COLCA2-201ENST00000398035 EXT2Q93063 718 aa17.86■□□□□ 0.45
COLCA2-201ENST00000398035 UBE2E3Q969T4 207 aa17.86■□□□□ 0.45
COLCA2-201ENST00000398035 ABHD17AQ96GS6 310 aa17.86■□□□□ 0.45
COLCA2-201ENST00000398035 COPG2Q9UBF2 871 aa17.86■□□□□ 0.45
COLCA2-201ENST00000398035 CTSFQ9UBX1 484 aa17.86■□□□□ 0.45
COLCA2-201ENST00000398035 ARGFXA6NJG6 315 aa17.85■□□□□ 0.45
COLCA2-201ENST00000398035 K7EPI3 171 aa17.85■□□□□ 0.45
COLCA2-201ENST00000398035 AGPSO00116 658 aa17.85■□□□□ 0.45
COLCA2-201ENST00000398035 UBXN8O00124 270 aa17.85■□□□□ 0.45
COLCA2-201ENST00000398035 KLK8O60259 260 aa17.85■□□□□ 0.45
COLCA2-201ENST00000398035 SERPIND1P05546 499 aa17.85■□□□□ 0.45
COLCA2-201ENST00000398035 UMODP07911 640 aa17.85■□□□□ 0.45
COLCA2-201ENST00000398035 CYC1P08574 325 aa17.85■□□□□ 0.45
COLCA2-201ENST00000398035 MTHFD2P13995 350 aa17.85■□□□□ 0.45
COLCA2-201ENST00000398035 KLC1Q07866 573 aa17.85■□□□□ 0.45
COLCA2-201ENST00000398035 XKR6Q5GH73 641 aa17.85■□□□□ 0.45
COLCA2-201ENST00000398035 TCTN3Q6NUS6 607 aa17.85■□□□□ 0.45
COLCA2-201ENST00000398035 MRGPREQ86SM8 312 aa17.85■□□□□ 0.45
COLCA2-201ENST00000398035 CLEC1AQ8NC01 280 aa17.85■□□□□ 0.45
COLCA2-201ENST00000398035 WDR34Q96EX3 536 aa17.85■□□□□ 0.45
COLCA2-201ENST00000398035 CRB3Q9BUF7 120 aa17.85■□□□□ 0.45
COLCA2-201ENST00000398035 ANKZF1Q9H8Y5 726 aa17.85■□□□□ 0.45
COLCA2-201ENST00000398035 P4HTMQ9NXG6 502 aa17.85■□□□□ 0.45
COLCA2-201ENST00000398035 PSMC3IPQ9P2W1 217 aaPredicted RBP17.85■□□□□ 0.45
COLCA2-201ENST00000398035 PCDHGA9Q9Y5G4 932 aaKnown RBP17.85■□□□□ 0.45
COLCA2-201ENST00000398035 ANKDD1BA6NHY2 528 aa17.84■□□□□ 0.45
COLCA2-201ENST00000398035 ALOX12P18054 663 aa17.84■□□□□ 0.45
COLCA2-201ENST00000398035 VARSP26640 1264 aaKnown RBP17.84■□□□□ 0.45
COLCA2-201ENST00000398035 PIK3CGP48736 1102 aa17.84■□□□□ 0.45
COLCA2-201ENST00000398035 STXBP1P61764 594 aaKnown RBP17.84■□□□□ 0.45
COLCA2-201ENST00000398035 IRF8Q02556 426 aa17.84■□□□□ 0.45
COLCA2-201ENST00000398035 SLBPQ14493 270 aaKnown RBP eCLIP17.84■□□□□ 0.45
COLCA2-201ENST00000398035 PCBP2Q15366 365 aaKnown RBP eCLIP17.84■□□□□ 0.45
COLCA2-201ENST00000398035 PFKFB4Q16877 469 aa17.84■□□□□ 0.45
COLCA2-201ENST00000398035 FAM69BQ5VUD6 431 aa17.84■□□□□ 0.45
COLCA2-201ENST00000398035 AFAP1L2Q8N4X5 818 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms