RNA–Protein interactions for RNA: ENST00000397942.3

SOCS6-201, Transcript of suppressor of cytokine signaling 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS6, Length 5,848 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS6-201ENST00000397942 LRRC32Q14392 662 aa12.04□□□□□ -0.48
SOCS6-201ENST00000397942 KLHL22Q53GT1 634 aa12.04□□□□□ -0.48
SOCS6-201ENST00000397942 ZNF311Q5JNZ3 666 aa12.04□□□□□ -0.48
SOCS6-201ENST00000397942 CDH24Q86UP0 819 aa12.04□□□□□ -0.48
SOCS6-201ENST00000397942 FAM98AQ8NCA5 519 aaKnown RBP12.04□□□□□ -0.48
SOCS6-201ENST00000397942 ATOH8Q96SQ7 321 aa12.04□□□□□ -0.48
SOCS6-201ENST00000397942 ING4Q9UNL4 249 aa12.04□□□□□ -0.48
SOCS6-201ENST00000397942 MYO5AQ9Y4I1 1855 aaKnown RBP12.04□□□□□ -0.48
SOCS6-201ENST00000397942 EP300Q09472 2414 aaPredicted RBP12.04□□□□□ -0.48
SOCS6-201ENST00000397942 CHURC1-FNTBB4DL54 471 aa12.04□□□□□ -0.48
SOCS6-201ENST00000397942 MT-ND2P03891 347 aa12.04□□□□□ -0.48
SOCS6-201ENST00000397942 SRPRAP08240 638 aaKnown RBP12.04□□□□□ -0.48
SOCS6-201ENST00000397942 CPN2P22792 545 aa12.04□□□□□ -0.48
SOCS6-201ENST00000397942 PSMD4P55036 377 aaKnown RBP12.04□□□□□ -0.48
SOCS6-201ENST00000397942 TMBIM6P55061 237 aa12.04□□□□□ -0.48
SOCS6-201ENST00000397942 ADAM17P78536 824 aa12.04□□□□□ -0.48
SOCS6-201ENST00000397942 FBXO43Q4G163 708 aa12.04□□□□□ -0.48
SOCS6-201ENST00000397942 KCTD11Q693B1 232 aa12.04□□□□□ -0.48
SOCS6-201ENST00000397942 REEP3Q6NUK4 255 aa12.04□□□□□ -0.48
SOCS6-201ENST00000397942 TCEANCQ8N8B7 351 aa12.04□□□□□ -0.48
SOCS6-201ENST00000397942 AQP11Q8NBQ7 271 aa12.04□□□□□ -0.48
SOCS6-201ENST00000397942 NFKBIDQ8NI38 313 aa12.04□□□□□ -0.48
SOCS6-201ENST00000397942 IRF7Q92985 503 aa12.04□□□□□ -0.48
SOCS6-201ENST00000397942 MGME1Q9BQP7 344 aa12.04□□□□□ -0.48
SOCS6-201ENST00000397942 ANKRD60Q9BZ19 345 aa12.04□□□□□ -0.48
SOCS6-201ENST00000397942 TAS2R9Q9NYW1 312 aa12.04□□□□□ -0.48
SOCS6-201ENST00000397942 A0A1W2PQ45 241 aaPredicted RBP12.04□□□□□ -0.48
SOCS6-201ENST00000397942 A0A1W2PQY0 241 aa12.04□□□□□ -0.48
SOCS6-201ENST00000397942 DUXAA6NLW8 204 aa12.04□□□□□ -0.48
SOCS6-201ENST00000397942 C6orf47O95873 294 aa12.04□□□□□ -0.48
SOCS6-201ENST00000397942 RB1P06400 928 aa12.04□□□□□ -0.48
SOCS6-201ENST00000397942 AVPR1BP47901 424 aa12.04□□□□□ -0.48
SOCS6-201ENST00000397942 CCR8P51685 355 aa12.04□□□□□ -0.48
SOCS6-201ENST00000397942 RCAN2Q14206 197 aa12.04□□□□□ -0.48
SOCS6-201ENST00000397942 SUZ12Q15022 739 aaKnown RBP12.04□□□□□ -0.48
SOCS6-201ENST00000397942 SHQ1Q6PI26 577 aaKnown RBP12.04□□□□□ -0.48
SOCS6-201ENST00000397942 USP43Q70EL4 1123 aa12.04□□□□□ -0.48
SOCS6-201ENST00000397942 GLYATL1Q969I3 302 aa12.04□□□□□ -0.48
SOCS6-201ENST00000397942 SCRN2Q96FV2 425 aa12.04□□□□□ -0.48
SOCS6-201ENST00000397942 UBXN10Q96LJ8 280 aa12.04□□□□□ -0.48
SOCS6-201ENST00000397942 ZFP3Q96NJ6 502 aa12.04□□□□□ -0.48
SOCS6-201ENST00000397942 MAN2B2Q9Y2E5 1009 aa12.04□□□□□ -0.48
SOCS6-201ENST00000397942 AREL1O15033 823 aa12.03□□□□□ -0.48
SOCS6-201ENST00000397942 PENKP01210 267 aaPredicted RBP12.03□□□□□ -0.48
SOCS6-201ENST00000397942 GPX3P22352 226 aa12.03□□□□□ -0.48
SOCS6-201ENST00000397942 ETV3P41162 512 aa12.03□□□□□ -0.48
SOCS6-201ENST00000397942 STXBP1P61764 594 aaKnown RBP12.03□□□□□ -0.48
SOCS6-201ENST00000397942 PDGFRLQ15198 375 aa12.03□□□□□ -0.48
SOCS6-201ENST00000397942 PCBP2Q15366 365 aaKnown RBP eCLIP12.03□□□□□ -0.488e-6■■■■□ 24
SOCS6-201ENST00000397942 VTCN1Q7Z7D3 282 aa12.03□□□□□ -0.48
SOCS6-201ENST00000397942 CENPSQ8N2Z9 138 aa12.03□□□□□ -0.48
SOCS6-201ENST00000397942 CD200R1Q8TD46 325 aa12.03□□□□□ -0.48
SOCS6-201ENST00000397942 HERVK_113Q902F9 699 aa12.03□□□□□ -0.48
SOCS6-201ENST00000397942 FEVQ99581 238 aa12.03□□□□□ -0.48
SOCS6-201ENST00000397942 ITPAQ9BY32 194 aa12.03□□□□□ -0.48
SOCS6-201ENST00000397942 RHCGQ9UBD6 479 aa12.03□□□□□ -0.48
SOCS6-201ENST00000397942 ZNF222Q9UK12 451 aa12.03□□□□□ -0.48
SOCS6-201ENST00000397942 ARHGEF33A8MVX0 844 aa12.03□□□□□ -0.48
SOCS6-201ENST00000397942 LEFTY1O75610 366 aa12.03□□□□□ -0.48
SOCS6-201ENST00000397942 DCTP40126 519 aa12.03□□□□□ -0.48
SOCS6-201ENST00000397942 PRMT2P55345 433 aa12.03□□□□□ -0.48
SOCS6-201ENST00000397942 TUBA1BP68363 451 aa12.03□□□□□ -0.48
SOCS6-201ENST00000397942 PLEKHS1Q5SXH7 462 aa12.03□□□□□ -0.48
SOCS6-201ENST00000397942 ZNF783Q6ZMS7 281 aa12.03□□□□□ -0.48
SOCS6-201ENST00000397942 TUBA1AQ71U36 451 aa12.03□□□□□ -0.48
SOCS6-201ENST00000397942 CLEC14AQ86T13 490 aa12.03□□□□□ -0.48
SOCS6-201ENST00000397942 LRRTM4Q86VH4 590 aa12.03□□□□□ -0.48
SOCS6-201ENST00000397942 SNX33Q8WV41 574 aa12.03□□□□□ -0.48
SOCS6-201ENST00000397942 RGMAQ96B86 450 aa12.03□□□□□ -0.48
SOCS6-201ENST00000397942 WDR26Q9H7D7 661 aa12.03□□□□□ -0.48
SOCS6-201ENST00000397942 SNX7Q9UNH6 387 aa12.03□□□□□ -0.48
SOCS6-201ENST00000397942 RNF6Q9Y252 685 aa12.03□□□□□ -0.48
SOCS6-201ENST00000397942 CACNA1GO43497 2377 aa12.03□□□□□ -0.48
SOCS6-201ENST00000397942 CROCCQ5TZA2 2017 aa12.03□□□□□ -0.48
SOCS6-201ENST00000397942 SH3PXD2BA1X283 911 aa12.03□□□□□ -0.48
SOCS6-201ENST00000397942 H7BY64 318 aa12.03□□□□□ -0.48
SOCS6-201ENST00000397942 NDUFB5O43674 189 aa12.03□□□□□ -0.48
SOCS6-201ENST00000397942 PDYNP01213 254 aa12.03□□□□□ -0.48
SOCS6-201ENST00000397942 HLA-EP13747 358 aa12.03□□□□□ -0.48
SOCS6-201ENST00000397942 BPIP17213 487 aa12.03□□□□□ -0.48
SOCS6-201ENST00000397942 NCBP2P52298 156 aaKnown RBP eCLIP12.03□□□□□ -0.48
SOCS6-201ENST00000397942 BNC1Q01954 994 aa12.03□□□□□ -0.48
SOCS6-201ENST00000397942 MINDY4Q4G0A6 757 aa12.03□□□□□ -0.48
SOCS6-201ENST00000397942 RAB41Q5JT25 222 aa12.03□□□□□ -0.48
SOCS6-201ENST00000397942 KIAA1161Q6NSJ0 714 aa12.03□□□□□ -0.48
SOCS6-201ENST00000397942 KLHL35Q6PF15 583 aa12.03□□□□□ -0.48
SOCS6-201ENST00000397942 FAM220AQ7Z4H9 259 aa12.03□□□□□ -0.48
SOCS6-201ENST00000397942 TSPAN33Q86UF1 283 aa12.03□□□□□ -0.48
SOCS6-201ENST00000397942 IQCHQ86VS3 1027 aa12.03□□□□□ -0.48
SOCS6-201ENST00000397942 KCT2Q8NC54 265 aa12.03□□□□□ -0.48
SOCS6-201ENST00000397942 FLCNQ8NFG4 579 aa12.03□□□□□ -0.48
SOCS6-201ENST00000397942 OR10H4Q8NGA5 316 aa12.03□□□□□ -0.48
SOCS6-201ENST00000397942 PIK3R3Q92569 461 aa12.03□□□□□ -0.48
SOCS6-201ENST00000397942 NUS1Q96E22 293 aa12.03□□□□□ -0.48
SOCS6-201ENST00000397942 PRAP1Q96NZ9 151 aa12.03□□□□□ -0.48
SOCS6-201ENST00000397942 MIR1-1HGQ9H1L0 117 aa12.03□□□□□ -0.48
SOCS6-201ENST00000397942 SP140LQ9H930 580 aa12.03□□□□□ -0.48
SOCS6-201ENST00000397942 IRAK3Q9Y616 596 aa12.03□□□□□ -0.48
SOCS6-201ENST00000397942 LAMA4Q16363 1823 aa12.03□□□□□ -0.48
SOCS6-201ENST00000397942 RIIAD1A6NNX1 92 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms