RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 IQANK1A0A1B0GTG1 560 aa6.47□□□□□ -1.37
SMCO1-201ENST00000397537 FAM240BA0A1B0GVZ2 78 aa6.47□□□□□ -1.37
SMCO1-201ENST00000397537 C12orf71A8MTZ7 269 aa6.47□□□□□ -1.37
SMCO1-201ENST00000397537 A8MUI8 341 aa6.47□□□□□ -1.37
SMCO1-201ENST00000397537 ZNF701M0R085 212 aaPredicted RBP6.47□□□□□ -1.37
SMCO1-201ENST00000397537 SLC28A1O00337 649 aa6.47□□□□□ -1.37
SMCO1-201ENST00000397537 CES2O00748 559 aa6.47□□□□□ -1.37
SMCO1-201ENST00000397537 PRAMEF11O60813 436 aa6.47□□□□□ -1.37
SMCO1-201ENST00000397537 RAD51DO75771 328 aa6.47□□□□□ -1.37
SMCO1-201ENST00000397537 OR4F21O95013 312 aa6.47□□□□□ -1.37
SMCO1-201ENST00000397537 OR5F1O95221 314 aa6.47□□□□□ -1.37
SMCO1-201ENST00000397537 MBD3O95983 291 aa6.47□□□□□ -1.37
SMCO1-201ENST00000397537 ALDOCP09972 364 aaKnown RBP6.47□□□□□ -1.37
SMCO1-201ENST00000397537 STAG3L1P0CL83 205 aa6.47□□□□□ -1.37
SMCO1-201ENST00000397537 VSIG10L2P0DP72 767 aa6.47□□□□□ -1.37
SMCO1-201ENST00000397537 EZRP15311 586 aaKnown RBP6.47□□□□□ -1.37
SMCO1-201ENST00000397537 GLDCP23378 1020 aa6.47□□□□□ -1.37
SMCO1-201ENST00000397537 SHMT1P34896 483 aa6.47□□□□□ -1.37
SMCO1-201ENST00000397537 CHRNA4P43681 627 aa6.47□□□□□ -1.37
SMCO1-201ENST00000397537 IER3P46695 156 aa6.47□□□□□ -1.37
SMCO1-201ENST00000397537 NPBWR1P48145 328 aa6.47□□□□□ -1.37
SMCO1-201ENST00000397537 PLCD1P51178 756 aa6.47□□□□□ -1.37
SMCO1-201ENST00000397537 SLC37A1P57057 533 aa6.47□□□□□ -1.37
SMCO1-201ENST00000397537 MRPS34P82930 218 aaKnown RBP6.47□□□□□ -1.37
SMCO1-201ENST00000397537 SSX2Q16385 188 aa6.47□□□□□ -1.37
SMCO1-201ENST00000397537 ME3Q16798 604 aa6.47□□□□□ -1.37
SMCO1-201ENST00000397537 TPD52L1Q16890 204 aaPredicted RBP6.47□□□□□ -1.37
SMCO1-201ENST00000397537 BMT2Q1RMZ1 405 aa6.47□□□□□ -1.37
SMCO1-201ENST00000397537 SOWAHAQ2M3V2 549 aa6.47□□□□□ -1.37
SMCO1-201ENST00000397537 CEP78Q5JTW2 689 aa6.47□□□□□ -1.37
SMCO1-201ENST00000397537 EFHC1Q5JVL4 640 aa6.47□□□□□ -1.37
SMCO1-201ENST00000397537 C6orf141Q5SZD1 244 aa6.47□□□□□ -1.37
SMCO1-201ENST00000397537 PAQR3Q6TCH7 311 aa6.47□□□□□ -1.37
SMCO1-201ENST00000397537 SHISA2Q6UWI4 295 aa6.47□□□□□ -1.37
SMCO1-201ENST00000397537 CD300LDQ6UXZ3 194 aa6.47□□□□□ -1.37
SMCO1-201ENST00000397537 LARP4Q71RC2 724 aaKnown RBP eCLIP6.47□□□□□ -1.37
SMCO1-201ENST00000397537 TMPRSS9Q7Z410 1059 aa6.47□□□□□ -1.37
SMCO1-201ENST00000397537 NOXA1Q86UR1 476 aa6.47□□□□□ -1.37
SMCO1-201ENST00000397537 XYLT1Q86Y38 959 aa6.47□□□□□ -1.37
SMCO1-201ENST00000397537 CCDC60Q8IWA6 550 aaPredicted RBP6.47□□□□□ -1.37
SMCO1-201ENST00000397537 LRRC75A-AS1Q8N1F1 130 aa6.47□□□□□ -1.37
SMCO1-201ENST00000397537 OR4A16Q8NH70 328 aa6.47□□□□□ -1.37
SMCO1-201ENST00000397537 CTHRC1Q96CG8 243 aa6.47□□□□□ -1.37
SMCO1-201ENST00000397537 HAVCR1Q96D42 359 aa6.47□□□□□ -1.37
SMCO1-201ENST00000397537 SPDL1Q96EA4 605 aa6.47□□□□□ -1.37
SMCO1-201ENST00000397537 TRNT1Q96Q11 434 aaKnown RBP6.47□□□□□ -1.37
SMCO1-201ENST00000397537 SIN3AQ96ST3 1273 aa6.47□□□□□ -1.37
SMCO1-201ENST00000397537 CGREF1Q99674 301 aa6.47□□□□□ -1.37
SMCO1-201ENST00000397537 TMEM47Q9BQJ4 181 aa6.47□□□□□ -1.37
SMCO1-201ENST00000397537 DPCDQ9BVM2 203 aaPredicted RBP6.47□□□□□ -1.37
SMCO1-201ENST00000397537 SPATA16Q9BXB7 569 aa6.47□□□□□ -1.37
SMCO1-201ENST00000397537 CADM1Q9BY67 442 aaKnown RBP6.47□□□□□ -1.37
SMCO1-201ENST00000397537 RAD21L1Q9H4I0 556 aa6.47□□□□□ -1.37
SMCO1-201ENST00000397537 FBXO44Q9H4M3 255 aa6.47□□□□□ -1.37
SMCO1-201ENST00000397537 TNFRSF12AQ9NP84 129 aa6.47□□□□□ -1.37
SMCO1-201ENST00000397537 VPS54Q9P1Q0 977 aa6.47□□□□□ -1.37
SMCO1-201ENST00000397537 CTTNBP2NLQ9P2B4 639 aa6.47□□□□□ -1.37
SMCO1-201ENST00000397537 RNF24Q9Y225 148 aa6.47□□□□□ -1.37
SMCO1-201ENST00000397537 IFT52Q9Y366 437 aa6.47□□□□□ -1.37
SMCO1-201ENST00000397537 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.47□□□□□ -1.37
SMCO1-201ENST00000397537 UBR3Q6ZT12 1888 aa6.47□□□□□ -1.37
SMCO1-201ENST00000397537 SZT2Q5T011 3432 aa6.46□□□□□ -1.37
SMCO1-201ENST00000397537 CCDC195A0A1B0GUA6 201 aa6.46□□□□□ -1.37
SMCO1-201ENST00000397537 MEX3AA1L020 520 aaKnown RBP6.46□□□□□ -1.37
SMCO1-201ENST00000397537 MBLAC1A4D2B0 266 aaPredicted RBP6.46□□□□□ -1.37
SMCO1-201ENST00000397537 FAM149AA5PLN7 773 aa6.46□□□□□ -1.37
SMCO1-201ENST00000397537 ABCD4O14678 606 aa6.46□□□□□ -1.37
SMCO1-201ENST00000397537 ZNF197O14709 1029 aa6.46□□□□□ -1.37
SMCO1-201ENST00000397537 KLF11O14901 512 aa6.46□□□□□ -1.37
SMCO1-201ENST00000397537 GRID2O43424 1007 aa6.46□□□□□ -1.37
SMCO1-201ENST00000397537 RNF13O43567 381 aa6.46□□□□□ -1.37
SMCO1-201ENST00000397537 SPRY2O43597 315 aa6.46□□□□□ -1.37
SMCO1-201ENST00000397537 ACSL4O60488 711 aa6.46□□□□□ -1.37
SMCO1-201ENST00000397537 RNF8O76064 485 aa6.46□□□□□ -1.37
SMCO1-201ENST00000397537 TMCC1O94876 653 aa6.46□□□□□ -1.37
SMCO1-201ENST00000397537 JUNP05412 331 aaKnown RBP6.46□□□□□ -1.37
SMCO1-201ENST00000397537 RAB40ALP0C0E4 278 aa6.46□□□□□ -1.37
SMCO1-201ENST00000397537 CYP2C8P10632 490 aa6.46□□□□□ -1.37
SMCO1-201ENST00000397537 CD22P20273 847 aa6.46□□□□□ -1.37
SMCO1-201ENST00000397537 S1PR1P21453 382 aa6.46□□□□□ -1.37
SMCO1-201ENST00000397537 PCMT1P22061 227 aa6.46□□□□□ -1.37
SMCO1-201ENST00000397537 GABRA5P31644 462 aa6.46□□□□□ -1.37
SMCO1-201ENST00000397537 CHI3L1P36222 383 aaPredicted RBP6.46□□□□□ -1.37
SMCO1-201ENST00000397537 CEBPDP49716 269 aaPredicted RBP6.46□□□□□ -1.37
SMCO1-201ENST00000397537 CCR4P51679 360 aa6.46□□□□□ -1.37
SMCO1-201ENST00000397537 VAV2P52735 878 aa6.46□□□□□ -1.37
SMCO1-201ENST00000397537 SELENOVP59797 346 aa6.46□□□□□ -1.37
SMCO1-201ENST00000397537 ADAM8P78325 824 aa6.46□□□□□ -1.37
SMCO1-201ENST00000397537 PRR5P85299 388 aa6.46□□□□□ -1.37
SMCO1-201ENST00000397537 MRPL49Q13405 166 aaKnown RBP6.46□□□□□ -1.37
SMCO1-201ENST00000397537 HERC3Q15034 1050 aa6.46□□□□□ -1.37
SMCO1-201ENST00000397537 MAPRE2Q15555 327 aa6.46□□□□□ -1.37
SMCO1-201ENST00000397537 CSRP2Q16527 193 aa6.46□□□□□ -1.37
SMCO1-201ENST00000397537 FAM174BQ3ZCQ3 159 aa6.46□□□□□ -1.37
SMCO1-201ENST00000397537 DCAF6Q58WW2 860 aa6.46□□□□□ -1.37
SMCO1-201ENST00000397537 RABL3Q5HYI8 236 aa6.46□□□□□ -1.37
SMCO1-201ENST00000397537 TWF2Q6IBS0 349 aaKnown RBP6.46□□□□□ -1.37
SMCO1-201ENST00000397537 TMEM53Q6P2H8 277 aa6.46□□□□□ -1.37
SMCO1-201ENST00000397537 LAX1Q8IWV1 398 aa6.46□□□□□ -1.37
SMCO1-201ENST00000397537 APCDD1Q8J025 514 aa6.46□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms