RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 PWP1Q13610 501 aa22.55■■□□□ 1.2
TSPAN4-202ENST00000397396 CUL3Q13618 768 aa22.55■■□□□ 1.2
TSPAN4-202ENST00000397396 SPIDRQ14159 915 aa22.55■■□□□ 1.2
TSPAN4-202ENST00000397396 TMTC4Q5T4D3 741 aa22.55■■□□□ 1.2
TSPAN4-202ENST00000397396 OGFOD2Q6N063 350 aa22.55■■□□□ 1.2
TSPAN4-202ENST00000397396 SCIMPQ6UWF3 145 aa22.55■■□□□ 1.2
TSPAN4-202ENST00000397396 Q6ZSR9 355 aa22.55■■□□□ 1.2
TSPAN4-202ENST00000397396 ASPGQ86U10 573 aa22.55■■□□□ 1.2
TSPAN4-202ENST00000397396 CAMKVQ8NCB2 501 aa22.55■■□□□ 1.2
TSPAN4-202ENST00000397396 PRR11Q96HE9 360 aaPredicted RBP22.55■■□□□ 1.2
TSPAN4-202ENST00000397396 PPM1MQ96MI6 270 aa22.55■■□□□ 1.2
TSPAN4-202ENST00000397396 HBEGFQ99075 208 aa22.55■■□□□ 1.2
TSPAN4-202ENST00000397396 NUDT22Q9BRQ3 303 aa22.55■■□□□ 1.2
TSPAN4-202ENST00000397396 AKTIPQ9H8T0 292 aa22.55■■□□□ 1.2
TSPAN4-202ENST00000397396 C1orf109Q9NX04 203 aa22.55■■□□□ 1.2
TSPAN4-202ENST00000397396 AHSPQ9NZD4 102 aa22.55■■□□□ 1.2
TSPAN4-202ENST00000397396 PDP2Q9P2J9 529 aa22.55■■□□□ 1.2
TSPAN4-202ENST00000397396 KLHL3Q9UH77 587 aa22.55■■□□□ 1.2
TSPAN4-202ENST00000397396 SLC12A4Q9UP95 1085 aa22.55■■□□□ 1.2
TSPAN4-202ENST00000397396 CCL27Q9Y4X3 112 aa22.55■■□□□ 1.2
TSPAN4-202ENST00000397396 PTGDR2Q9Y5Y4 395 aa22.55■■□□□ 1.2
TSPAN4-202ENST00000397396 HEATR5BQ9P2D3 2071 aa22.54■■□□□ 1.2
TSPAN4-202ENST00000397396 ATP6AP2A0A1C7CYW4 349 aa22.54■■□□□ 1.2
TSPAN4-202ENST00000397396 URADA6NGE7 173 aa22.54■■□□□ 1.2
TSPAN4-202ENST00000397396 NTN3O00634 580 aaPredicted RBP22.54■■□□□ 1.2
TSPAN4-202ENST00000397396 LSM1O15116 133 aaKnown RBP22.54■■□□□ 1.2
TSPAN4-202ENST00000397396 CCDC22O60826 627 aa22.54■■□□□ 1.2
TSPAN4-202ENST00000397396 ATP6AP2O75787 350 aa22.54■■□□□ 1.2
TSPAN4-202ENST00000397396 SERPINA6P08185 405 aa22.54■■□□□ 1.2
TSPAN4-202ENST00000397396 PRR35P0CG20 571 aa22.54■■□□□ 1.2
TSPAN4-202ENST00000397396 CDK4P11802 303 aa22.54■■□□□ 1.2
TSPAN4-202ENST00000397396 MAPK1P28482 360 aa22.54■■□□□ 1.2
TSPAN4-202ENST00000397396 ARFIP1P53367 373 aa22.54■■□□□ 1.2
TSPAN4-202ENST00000397396 STXBP1P61764 594 aaKnown RBP22.54■■□□□ 1.2
TSPAN4-202ENST00000397396 RPS13P62277 151 aaKnown RBP22.54■■□□□ 1.2
TSPAN4-202ENST00000397396 NHLH1Q02575 133 aa22.54■■□□□ 1.2
TSPAN4-202ENST00000397396 CFHR1Q03591 330 aa22.54■■□□□ 1.2
TSPAN4-202ENST00000397396 CYP4F3Q08477 520 aa22.54■■□□□ 1.2
TSPAN4-202ENST00000397396 SF3A3Q12874 501 aaKnown RBP eCLIP22.54■■□□□ 1.23e-13■■■■■ 49.7
TSPAN4-202ENST00000397396 LSM12Q3MHD2 195 aaKnown RBP22.54■■□□□ 1.2
TSPAN4-202ENST00000397396 TMEM35AQ53FP2 167 aa22.54■■□□□ 1.2
TSPAN4-202ENST00000397396 SPIN4Q56A73 249 aa22.54■■□□□ 1.2
TSPAN4-202ENST00000397396 SPDYAQ5MJ70 313 aa22.54■■□□□ 1.2
TSPAN4-202ENST00000397396 MANEAQ5SRI9 462 aa22.54■■□□□ 1.2
TSPAN4-202ENST00000397396 LARP4Q71RC2 724 aaKnown RBP eCLIP22.54■■□□□ 1.28e-7■■■■■ 32.5
TSPAN4-202ENST00000397396 SPATA19Q7Z5L4 167 aa22.54■■□□□ 1.2
TSPAN4-202ENST00000397396 PLD3Q8IV08 490 aa22.54■■□□□ 1.2
TSPAN4-202ENST00000397396 SRFBP1Q8NEF9 429 aaKnown RBP22.54■■□□□ 1.2
TSPAN4-202ENST00000397396 C3orf30Q96M34 536 aa22.54■■□□□ 1.2
TSPAN4-202ENST00000397396 OR2A5Q96R48 311 aa22.54■■□□□ 1.2
TSPAN4-202ENST00000397396 OR52B2Q96RD2 323 aa22.54■■□□□ 1.2
TSPAN4-202ENST00000397396 MS4A8Q9BY19 250 aa22.54■■□□□ 1.2
TSPAN4-202ENST00000397396 KLHL25Q9H0H3 589 aa22.54■■□□□ 1.2
TSPAN4-202ENST00000397396 ZNF768Q9H5H4 540 aaKnown RBP22.54■■□□□ 1.2
TSPAN4-202ENST00000397396 LRTM1Q9HBL6 345 aa22.54■■□□□ 1.2
TSPAN4-202ENST00000397396 PCDHGA1Q9Y5H4 931 aa22.54■■□□□ 1.2
TSPAN4-202ENST00000397396 IGHV5-51A0A0C4DH38 117 aa22.53■■□□□ 1.2
TSPAN4-202ENST00000397396 A0A0J9YVX5 310 aa22.53■■□□□ 1.2
TSPAN4-202ENST00000397396 D6RAR5 112 aa22.53■■□□□ 1.2
TSPAN4-202ENST00000397396 KIF1CO43896 1103 aaKnown RBP22.53■■□□□ 1.2
TSPAN4-202ENST00000397396 LCMT2O60294 686 aaKnown RBP22.53■■□□□ 1.2
TSPAN4-202ENST00000397396 SRPX2O60687 465 aaPredicted RBP22.53■■□□□ 1.2
TSPAN4-202ENST00000397396 CTSVO60911 334 aa22.53■■□□□ 1.2
TSPAN4-202ENST00000397396 ACPPP15309 386 aa22.53■■□□□ 1.2
TSPAN4-202ENST00000397396 ERVK-8P63133 956 aa22.53■■□□□ 1.2
TSPAN4-202ENST00000397396 CYP4F2P78329 520 aa22.53■■□□□ 1.2
TSPAN4-202ENST00000397396 HMGCS1Q01581 520 aa22.53■■□□□ 1.2
TSPAN4-202ENST00000397396 TGM3Q08188 693 aa22.53■■□□□ 1.2
TSPAN4-202ENST00000397396 ZIC1Q15915 447 aa22.53■■□□□ 1.2
TSPAN4-202ENST00000397396 KHDRBS2Q5VWX1 349 aaKnown RBP22.53■■□□□ 1.2
TSPAN4-202ENST00000397396 FBXO42Q6P3S6 717 aa22.53■■□□□ 1.2
TSPAN4-202ENST00000397396 PIP4P1Q86T03 277 aa22.53■■□□□ 1.2
TSPAN4-202ENST00000397396 ZFAND4Q86XD8 727 aa22.53■■□□□ 1.2
TSPAN4-202ENST00000397396 OR2T11Q8NH01 316 aa22.53■■□□□ 1.2
TSPAN4-202ENST00000397396 NT5CQ8TCD5 201 aa22.53■■□□□ 1.2
TSPAN4-202ENST00000397396 CREB3L4Q8TEY5 395 aa22.53■■□□□ 1.2
TSPAN4-202ENST00000397396 SLC13A3Q8WWT9 602 aa22.53■■□□□ 1.2
TSPAN4-202ENST00000397396 KLHL6Q8WZ60 621 aa22.53■■□□□ 1.2
TSPAN4-202ENST00000397396 N4BP2L2Q92802 583 aaPredicted RBP22.53■■□□□ 1.2
TSPAN4-202ENST00000397396 SLC41A2Q96JW4 573 aa22.53■■□□□ 1.2
TSPAN4-202ENST00000397396 PLCL2Q9UPR0 1127 aa22.53■■□□□ 1.2
TSPAN4-202ENST00000397396 ZSCAN9O15535 394 aaPredicted RBP22.52■■□□□ 1.2
TSPAN4-202ENST00000397396 NDUFS4O43181 175 aa22.52■■□□□ 1.2
TSPAN4-202ENST00000397396 PEX11AO75192 247 aa22.52■■□□□ 1.2
TSPAN4-202ENST00000397396 RFPL3O75679 317 aa22.52■■□□□ 1.2
TSPAN4-202ENST00000397396 MYO1DO94832 1006 aa22.52■■□□□ 1.2
TSPAN4-202ENST00000397396 MSL3P1P0C860 447 aa22.52■■□□□ 1.2
TSPAN4-202ENST00000397396 THRAP10827 490 aa22.52■■□□□ 1.2
TSPAN4-202ENST00000397396 ACSM2AQ08AH3 577 aa22.52■■□□□ 1.2
TSPAN4-202ENST00000397396 AP5B1Q2VPB7 878 aa22.52■■□□□ 1.2
TSPAN4-202ENST00000397396 C6orf136Q5SQH8 315 aa22.52■■□□□ 1.2
TSPAN4-202ENST00000397396 ACSM2BQ68CK6 577 aa22.52■■□□□ 1.2
TSPAN4-202ENST00000397396 CYB5D1Q6P9G0 228 aa22.52■■□□□ 1.2
TSPAN4-202ENST00000397396 VN1R5Q7Z5H4 357 aa22.52■■□□□ 1.2
TSPAN4-202ENST00000397396 FAM9CQ8IZT9 166 aa22.52■■□□□ 1.2
TSPAN4-202ENST00000397396 DNAJC22Q8N4W6 341 aa22.52■■□□□ 1.2
TSPAN4-202ENST00000397396 FNDC5Q8NAU1 212 aa22.52■■□□□ 1.2
TSPAN4-202ENST00000397396 FANCEQ9HB96 536 aa22.52■■□□□ 1.2
TSPAN4-202ENST00000397396 ATXN7L1Q9ULK2 861 aaPredicted RBP22.52■■□□□ 1.2
TSPAN4-202ENST00000397396 SNRNP200O75643 2136 aaKnown RBP22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms