RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 TEX264Q9Y6I9 313 aa17.04■□□□□ 0.32
CXCL12-204ENST00000395793 NOTCH2Q04721 2471 aa17.03■□□□□ 0.32
CXCL12-204ENST00000395793 CTAGE15A4D2H0 777 aa17.03■□□□□ 0.32
CXCL12-204ENST00000395793 ZNF860A6NHJ4 632 aa17.03■□□□□ 0.32
CXCL12-204ENST00000395793 WDPCPO95876 746 aa17.03■□□□□ 0.32
CXCL12-204ENST00000395793 EDN3P14138 238 aa17.03■□□□□ 0.32
CXCL12-204ENST00000395793 TDGF1P3P51864 188 aa17.03■□□□□ 0.32
CXCL12-204ENST00000395793 PDAP1Q13442 181 aaKnown RBP17.03■□□□□ 0.32
CXCL12-204ENST00000395793 MORF4L2Q15014 288 aa17.03■□□□□ 0.32
CXCL12-204ENST00000395793 MINDY4Q4G0A6 757 aa17.03■□□□□ 0.32
CXCL12-204ENST00000395793 ZNF324BQ6AW86 544 aaPredicted RBP17.03■□□□□ 0.32
CXCL12-204ENST00000395793 ZNF787Q6DD87 383 aa17.03■□□□□ 0.32
CXCL12-204ENST00000395793 CAPN13Q6MZZ7 669 aaPredicted RBP17.03■□□□□ 0.32
CXCL12-204ENST00000395793 MAMDC2Q7Z304 686 aaPredicted RBP17.03■□□□□ 0.32
CXCL12-204ENST00000395793 CTAGE6Q86UF2 777 aa17.03■□□□□ 0.32
CXCL12-204ENST00000395793 PALM2Q8IXS6 379 aa17.03■□□□□ 0.32
CXCL12-204ENST00000395793 MFSD9Q8NBP5 474 aa17.03■□□□□ 0.32
CXCL12-204ENST00000395793 CAMKVQ8NCB2 501 aa17.03■□□□□ 0.32
CXCL12-204ENST00000395793 ZNF740Q8NDX6 193 aa17.03■□□□□ 0.32
CXCL12-204ENST00000395793 ABHD11Q8NFV4 315 aa17.03■□□□□ 0.32
CXCL12-204ENST00000395793 SLC13A3Q8WWT9 602 aa17.03■□□□□ 0.32
CXCL12-204ENST00000395793 HAS2Q92819 552 aa17.03■□□□□ 0.32
CXCL12-204ENST00000395793 CYTH2Q99418 400 aa17.03■□□□□ 0.32
CXCL12-204ENST00000395793 RBCK1Q9BYM8 510 aa17.03■□□□□ 0.32
CXCL12-204ENST00000395793 PPANQ9NQ55 473 aaKnown RBP17.03■□□□□ 0.32
CXCL12-204ENST00000395793 CACNA1DQ01668 2161 aa17.03■□□□□ 0.32
CXCL12-204ENST00000395793 FANCGO15287 622 aa17.02■□□□□ 0.32
CXCL12-204ENST00000395793 TTI1O43156 1089 aa17.02■□□□□ 0.32
CXCL12-204ENST00000395793 DNAJB6O75190 326 aa17.02■□□□□ 0.32
CXCL12-204ENST00000395793 WFS1O76024 890 aa17.02■□□□□ 0.32
CXCL12-204ENST00000395793 B3GALT4O96024 378 aa17.02■□□□□ 0.32
CXCL12-204ENST00000395793 CCND1P24385 295 aa17.02■□□□□ 0.32
CXCL12-204ENST00000395793 ITGA8P53708 1063 aa17.02■□□□□ 0.32
CXCL12-204ENST00000395793 IL2P60568 153 aa17.02■□□□□ 0.32
CXCL12-204ENST00000395793 SRSF11Q05519 484 aaKnown RBP17.02■□□□□ 0.32
CXCL12-204ENST00000395793 FASTKD3Q14CZ7 662 aaKnown RBP17.02■□□□□ 0.32
CXCL12-204ENST00000395793 CATSPEREQ5SY80 951 aa17.02■□□□□ 0.32
CXCL12-204ENST00000395793 MFSD4BQ5TF39 518 aa17.02■□□□□ 0.32
CXCL12-204ENST00000395793 DUPD1Q68J44 220 aa17.02■□□□□ 0.32
CXCL12-204ENST00000395793 FAM45BPQ6NSW5 357 aa17.02■□□□□ 0.32
CXCL12-204ENST00000395793 FAM180AQ6UWF9 173 aa17.02■□□□□ 0.32
CXCL12-204ENST00000395793 SBSNQ6UWP8 590 aa17.02■□□□□ 0.32
CXCL12-204ENST00000395793 CPEB2Q7Z5Q1 589 aaKnown RBP17.02■□□□□ 0.32
CXCL12-204ENST00000395793 ANKRD37Q7Z713 158 aa17.02■□□□□ 0.32
CXCL12-204ENST00000395793 ANKMY2Q8IV38 441 aa17.02■□□□□ 0.32
CXCL12-204ENST00000395793 PDIK1LQ8N165 341 aa17.02■□□□□ 0.32
CXCL12-204ENST00000395793 OR4K1Q8NGD4 311 aa17.02■□□□□ 0.32
CXCL12-204ENST00000395793 OR5T3Q8NGG3 340 aa17.02■□□□□ 0.32
CXCL12-204ENST00000395793 GABPB2Q8TAK5 448 aaPredicted RBP17.02■□□□□ 0.32
CXCL12-204ENST00000395793 FAM45AQ8TCE6 357 aa17.02■□□□□ 0.32
CXCL12-204ENST00000395793 FBXL8Q96CD0 374 aa17.02■□□□□ 0.32
CXCL12-204ENST00000395793 TUBB6Q9BUF5 446 aa17.02■□□□□ 0.32
CXCL12-204ENST00000395793 SARGQ9BW04 601 aa17.02■□□□□ 0.32
CXCL12-204ENST00000395793 LANCL2Q9NS86 450 aa17.02■□□□□ 0.32
CXCL12-204ENST00000395793 ARL15Q9NXU5 204 aa17.02■□□□□ 0.32
CXCL12-204ENST00000395793 OSGIN2Q9Y236 505 aa17.02■□□□□ 0.32
CXCL12-204ENST00000395793 VWA7Q9Y334 891 aa17.02■□□□□ 0.32
CXCL12-204ENST00000395793 NAALAD2Q9Y3Q0 740 aa17.02■□□□□ 0.32
CXCL12-204ENST00000395793 DYTNA2CJ06 578 aa17.01■□□□□ 0.31
CXCL12-204ENST00000395793 SEC31AO94979 1220 aaKnown RBP17.01■□□□□ 0.31
CXCL12-204ENST00000395793 GUCA1CO95843 209 aa17.01■□□□□ 0.31
CXCL12-204ENST00000395793 DR1Q01658 176 aa17.01■□□□□ 0.31
CXCL12-204ENST00000395793 ZNF460Q14592 562 aa17.01■□□□□ 0.31
CXCL12-204ENST00000395793 PPP1R3AQ16821 1122 aa17.01■□□□□ 0.31
CXCL12-204ENST00000395793 SYDE1Q6ZW31 735 aaPredicted RBP17.01■□□□□ 0.31
CXCL12-204ENST00000395793 AFAP1L2Q8N4X5 818 aa17.01■□□□□ 0.31
CXCL12-204ENST00000395793 METTL21AQ8WXB1 218 aa17.01■□□□□ 0.31
CXCL12-204ENST00000395793 SNF8Q96H20 258 aa17.01■□□□□ 0.31
CXCL12-204ENST00000395793 MAGEB10Q96LZ2 347 aaPredicted RBP17.01■□□□□ 0.31
CXCL12-204ENST00000395793 HAUS8Q9BT25 410 aa17.01■□□□□ 0.31
CXCL12-204ENST00000395793 RNF32Q9H0A6 362 aa17.01■□□□□ 0.31
CXCL12-204ENST00000395793 ANKHQ9HCJ1 492 aa17.01■□□□□ 0.31
CXCL12-204ENST00000395793 OLAHQ9NV23 265 aa17.01■□□□□ 0.31
CXCL12-204ENST00000395793 CORO1CQ9ULV4 474 aaPredicted RBP17.01■□□□□ 0.31
CXCL12-204ENST00000395793 SLC22A7Q9Y694 548 aa17.01■□□□□ 0.31
CXCL12-204ENST00000395793 TRAV17A0A0B4J275 112 aa17■□□□□ 0.31
CXCL12-204ENST00000395793 LRRTM2O43300 516 aa17■□□□□ 0.31
CXCL12-204ENST00000395793 CYC1P08574 325 aa17■□□□□ 0.31
CXCL12-204ENST00000395793 HIST1H2AGP0C0S8 130 aaPredicted RBP17■□□□□ 0.31
CXCL12-204ENST00000395793 SLC35G6P0C7Q6 338 aa17■□□□□ 0.31
CXCL12-204ENST00000395793 ZNF37AP17032 561 aaPredicted RBP17■□□□□ 0.31
CXCL12-204ENST00000395793 HIST1H2ADP20671 130 aa17■□□□□ 0.31
CXCL12-204ENST00000395793 CCR8P51685 355 aa17■□□□□ 0.31
CXCL12-204ENST00000395793 AP1S2P56377 157 aa17■□□□□ 0.31
CXCL12-204ENST00000395793 RHAGQ02094 409 aa17■□□□□ 0.31
CXCL12-204ENST00000395793 FCRLBQ6BAA4 426 aa17■□□□□ 0.31
CXCL12-204ENST00000395793 PLAG1Q6DJT9 500 aa17■□□□□ 0.31
CXCL12-204ENST00000395793 BCORP1Q8N888 145 aa17■□□□□ 0.31
CXCL12-204ENST00000395793 TSLPQ969D9 159 aa17■□□□□ 0.31
CXCL12-204ENST00000395793 NEIL2Q969S2 332 aa17■□□□□ 0.31
CXCL12-204ENST00000395793 LRRC39Q96DD0 335 aa17■□□□□ 0.31
CXCL12-204ENST00000395793 PEX11GQ96HA9 241 aa17■□□□□ 0.31
CXCL12-204ENST00000395793 PDLIM5Q96HC4 596 aaKnown RBP17■□□□□ 0.31
CXCL12-204ENST00000395793 HIST1H2AHQ96KK5 128 aa17■□□□□ 0.31
CXCL12-204ENST00000395793 NPAS2Q99743 824 aa17■□□□□ 0.31
CXCL12-204ENST00000395793 HIST1H2AJQ99878 128 aa17■□□□□ 0.31
CXCL12-204ENST00000395793 H2AFJQ9BTM1 129 aa17■□□□□ 0.31
CXCL12-204ENST00000395793 TRIM31Q9BZY9 425 aa17■□□□□ 0.31
CXCL12-204ENST00000395793 TRBC2A0A5B9 178 aa16.99■□□□□ 0.31
CXCL12-204ENST00000395793 NPEPPSL1A6NEC2 478 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms