RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 PCDHA9Q9Y5H5 950 aa18.54■□□□□ 0.56
LMNB1-202ENST00000395354 CSNK1G3Q9Y6M4 447 aa18.54■□□□□ 0.56
LMNB1-202ENST00000395354 LMO7DNF2Z398 122 aa18.53■□□□□ 0.56
LMNB1-202ENST00000395354 MAP3K7O43318 606 aa18.53■□□□□ 0.56
LMNB1-202ENST00000395354 MYO1DO94832 1006 aa18.53■□□□□ 0.56
LMNB1-202ENST00000395354 ANXA6P08133 673 aa18.53■□□□□ 0.56
LMNB1-202ENST00000395354 PTDSS1P48651 473 aaKnown RBP18.53■□□□□ 0.56
LMNB1-202ENST00000395354 CCT8P50990 548 aa18.53■□□□□ 0.56
LMNB1-202ENST00000395354 SLBPQ14493 270 aaKnown RBP eCLIP18.53■□□□□ 0.56
LMNB1-202ENST00000395354 UAP1L1Q3KQV9 507 aa18.53■□□□□ 0.56
LMNB1-202ENST00000395354 CATSPEREQ5SY80 951 aa18.53■□□□□ 0.56
LMNB1-202ENST00000395354 THEMIS2Q5TEJ8 643 aa18.53■□□□□ 0.56
LMNB1-202ENST00000395354 NOXRED1Q6NXP6 359 aa18.53■□□□□ 0.56
LMNB1-202ENST00000395354 GATAD2AQ86YP4 633 aa18.53■□□□□ 0.56
LMNB1-202ENST00000395354 RNF148Q8N7C7 305 aa18.53■□□□□ 0.56
LMNB1-202ENST00000395354 SAP25Q8TEE9 199 aa18.53■□□□□ 0.56
LMNB1-202ENST00000395354 SLC13A3Q8WWT9 602 aa18.53■□□□□ 0.56
LMNB1-202ENST00000395354 TESCQ96BS2 214 aa18.53■□□□□ 0.56
LMNB1-202ENST00000395354 SLC45A3Q96JT2 553 aa18.53■□□□□ 0.56
LMNB1-202ENST00000395354 FERD3LQ96RJ6 166 aa18.53■□□□□ 0.56
LMNB1-202ENST00000395354 PELI2Q9HAT8 420 aa18.53■□□□□ 0.56
LMNB1-202ENST00000395354 IL1RL2Q9HB29 575 aa18.53■□□□□ 0.56
LMNB1-202ENST00000395354 PARD6AQ9NPB6 346 aa18.53■□□□□ 0.56
LMNB1-202ENST00000395354 GEMIN8Q9NWZ8 242 aaKnown RBP18.53■□□□□ 0.56
LMNB1-202ENST00000395354 SIRT5Q9NXA8 310 aa18.53■□□□□ 0.56
LMNB1-202ENST00000395354 MAPRE3Q9UPY8 281 aa18.53■□□□□ 0.56
LMNB1-202ENST00000395354 DLGAP4Q9Y2H0 992 aa18.53■□□□□ 0.56
LMNB1-202ENST00000395354 WDR37Q9Y2I8 494 aa18.53■□□□□ 0.56
LMNB1-202ENST00000395354 HEBP2Q9Y5Z4 205 aa18.53■□□□□ 0.56
LMNB1-202ENST00000395354 PDZK1P1A8MUH7 402 aa18.52■□□□□ 0.56
LMNB1-202ENST00000395354 STAMBPO95630 424 aa18.52■□□□□ 0.56
LMNB1-202ENST00000395354 SDC1P18827 310 aa18.52■□□□□ 0.56
LMNB1-202ENST00000395354 PIK3CBP42338 1070 aa18.52■□□□□ 0.56
LMNB1-202ENST00000395354 C21orf58P58505 322 aa18.52■□□□□ 0.56
LMNB1-202ENST00000395354 PHEXP78562 749 aa18.52■□□□□ 0.56
LMNB1-202ENST00000395354 BNIP2Q12982 314 aa18.52■□□□□ 0.56
LMNB1-202ENST00000395354 PWP1Q13610 501 aa18.52■□□□□ 0.56
LMNB1-202ENST00000395354 TSTA3Q13630 321 aaPredicted RBP18.52■□□□□ 0.56
LMNB1-202ENST00000395354 SPIN4Q56A73 249 aa18.52■□□□□ 0.56
LMNB1-202ENST00000395354 WASH2PQ6VEQ5 465 aa18.52■□□□□ 0.56
LMNB1-202ENST00000395354 MSANTD1Q6ZTZ1 278 aa18.52■□□□□ 0.56
LMNB1-202ENST00000395354 DHDDSQ86SQ9 333 aa18.52■□□□□ 0.56
LMNB1-202ENST00000395354 HUS1BQ8NHY5 278 aa18.52■□□□□ 0.56
LMNB1-202ENST00000395354 TMEM125Q96AQ2 219 aa18.52■□□□□ 0.56
LMNB1-202ENST00000395354 C11orf24Q96F05 449 aaPredicted RBP18.52■□□□□ 0.56
LMNB1-202ENST00000395354 APOLD1Q96LR9 279 aa18.52■□□□□ 0.56
LMNB1-202ENST00000395354 IL17FQ96PD4 163 aa18.52■□□□□ 0.56
LMNB1-202ENST00000395354 MTERF1Q99551 399 aaKnown RBP18.52■□□□□ 0.56
LMNB1-202ENST00000395354 SLC39A3Q9BRY0 314 aa18.52■□□□□ 0.56
LMNB1-202ENST00000395354 PITHD1Q9GZP4 211 aaPredicted RBP18.52■□□□□ 0.56
LMNB1-202ENST00000395354 MUC13Q9H3R2 512 aa18.52■□□□□ 0.56
LMNB1-202ENST00000395354 WASH6PQ9NQA3 447 aa18.52■□□□□ 0.56
LMNB1-202ENST00000395354 ADGRE2Q9UHX3 823 aa18.52■□□□□ 0.56
LMNB1-202ENST00000395354 PIPSLA2A3N6 862 aa18.51■□□□□ 0.55
LMNB1-202ENST00000395354 MAGEB17A8MXT2 336 aa18.51■□□□□ 0.55
LMNB1-202ENST00000395354 NME4O00746 187 aa18.51■□□□□ 0.55
LMNB1-202ENST00000395354 KDM1AO60341 852 aa18.51■□□□□ 0.55
LMNB1-202ENST00000395354 DNAJA2O60884 412 aa18.51■□□□□ 0.55
LMNB1-202ENST00000395354 EML2O95834 649 aa18.51■□□□□ 0.55
LMNB1-202ENST00000395354 PCNAP12004 261 aa18.51■□□□□ 0.55
LMNB1-202ENST00000395354 TGM1P22735 817 aa18.51■□□□□ 0.55
LMNB1-202ENST00000395354 VHLP40337 213 aa18.51■□□□□ 0.55
LMNB1-202ENST00000395354 HNRNPFP52597 415 aaKnown RBP18.51■□□□□ 0.55
LMNB1-202ENST00000395354 EEFSECP57772 596 aaKnown RBP18.51■□□□□ 0.55
LMNB1-202ENST00000395354 ACSM2AQ08AH3 577 aa18.51■□□□□ 0.55
LMNB1-202ENST00000395354 DPY19L1Q2PZI1 675 aa18.51■□□□□ 0.55
LMNB1-202ENST00000395354 DEFB133Q30KQ1 61 aa18.51■□□□□ 0.55
LMNB1-202ENST00000395354 WLSQ5T9L3 541 aa18.51■□□□□ 0.55
LMNB1-202ENST00000395354 ACSM2BQ68CK6 577 aa18.51■□□□□ 0.55
LMNB1-202ENST00000395354 SLC2A7Q6PXP3 512 aa18.51■□□□□ 0.55
LMNB1-202ENST00000395354 ABRAXAS1Q6UWZ7 409 aa18.51■□□□□ 0.55
LMNB1-202ENST00000395354 DLEU7Q6UYE1 221 aa18.51■□□□□ 0.55
LMNB1-202ENST00000395354 KANSL1Q7Z3B3 1105 aa18.51■□□□□ 0.55
LMNB1-202ENST00000395354 C17orf64Q86WR6 236 aa18.51■□□□□ 0.55
LMNB1-202ENST00000395354 KRT78Q8N1N4 520 aa18.51■□□□□ 0.55
LMNB1-202ENST00000395354 STARD8Q92502 1023 aa18.51■□□□□ 0.55
LMNB1-202ENST00000395354 CAMK1GQ96NX5 476 aa18.51■□□□□ 0.55
LMNB1-202ENST00000395354 CMTM6Q9NX76 183 aa18.51■□□□□ 0.55
LMNB1-202ENST00000395354 PCOLCE2Q9UKZ9 415 aa18.51■□□□□ 0.55
LMNB1-202ENST00000395354 PLAGL1Q9UM63 463 aa18.51■□□□□ 0.55
LMNB1-202ENST00000395354 SH2B3Q9UQQ2 575 aa18.51■□□□□ 0.55
LMNB1-202ENST00000395354 CFAP20Q9Y6A4 193 aaKnown RBP18.51■□□□□ 0.55
LMNB1-202ENST00000395354 ARID1BQ8NFD5 2236 aaPredicted RBP18.51■□□□□ 0.55
LMNB1-202ENST00000395354 FRYLO94915 3013 aa18.51■□□□□ 0.55
LMNB1-202ENST00000395354 PCDHGA12O60330 932 aa18.51■□□□□ 0.55
LMNB1-202ENST00000395354 KCNH1O95259 989 aa18.51■□□□□ 0.55
LMNB1-202ENST00000395354 PGRP06401 933 aa18.51■□□□□ 0.55
LMNB1-202ENST00000395354 PRPS1L1P21108 318 aa18.51■□□□□ 0.55
LMNB1-202ENST00000395354 CXCR2P25025 360 aa18.51■□□□□ 0.55
LMNB1-202ENST00000395354 SERPINB1P30740 379 aa18.51■□□□□ 0.55
LMNB1-202ENST00000395354 DGKQP52824 942 aa18.51■□□□□ 0.55
LMNB1-202ENST00000395354 DDX39BQ13838 428 aaKnown RBP18.51■□□□□ 0.55
LMNB1-202ENST00000395354 CAPRIN1Q14444 709 aaKnown RBP18.51■□□□□ 0.55
LMNB1-202ENST00000395354 FAM174BQ3ZCQ3 159 aa18.51■□□□□ 0.55
LMNB1-202ENST00000395354 LRRC74BQ6ZQY2 392 aa18.51■□□□□ 0.55
LMNB1-202ENST00000395354 FAM129CQ86XR2 697 aa18.51■□□□□ 0.55
LMNB1-202ENST00000395354 RIMKLAQ8IXN7 391 aa18.51■□□□□ 0.55
LMNB1-202ENST00000395354 BHLHE22Q8NFJ8 381 aaPredicted RBP18.51■□□□□ 0.55
LMNB1-202ENST00000395354 ABHD11Q8NFV4 315 aa18.51■□□□□ 0.55
LMNB1-202ENST00000395354 CHTF18Q8WVB6 975 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms