RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 SLC39A4Q6P5W5 647 aa10.08□□□□□ -0.8
COL4A6-203ENST00000394872 ORAI3Q9BRQ5 295 aa10.08□□□□□ -0.8
COL4A6-203ENST00000394872 RBCK1Q9BYM8 510 aa10.08□□□□□ -0.8
COL4A6-203ENST00000394872 A0A1W2PP55 124 aa10.08□□□□□ -0.8
COL4A6-203ENST00000394872 C5orf51A6NDU8 294 aa10.08□□□□□ -0.8
COL4A6-203ENST00000394872 SYNGR4O95473 234 aa10.08□□□□□ -0.8
COL4A6-203ENST00000394872 S100A6P06703 90 aa10.08□□□□□ -0.8
COL4A6-203ENST00000394872 GALNT2Q10471 571 aa10.08□□□□□ -0.8
COL4A6-203ENST00000394872 CARTPTQ16568 116 aa10.08□□□□□ -0.8
COL4A6-203ENST00000394872 UPP1Q16831 310 aa10.08□□□□□ -0.8
COL4A6-203ENST00000394872 C1orf94Q6P1W5 598 aa10.08□□□□□ -0.8
COL4A6-203ENST00000394872 SLC2A7Q6PXP3 512 aa10.08□□□□□ -0.8
COL4A6-203ENST00000394872 WDR77Q9BQA1 342 aaPredicted RBP10.08□□□□□ -0.8
COL4A6-203ENST00000394872 CHIAQ9BZP6 476 aa10.08□□□□□ -0.8
COL4A6-203ENST00000394872 OR8D2Q9GZM6 311 aa10.08□□□□□ -0.8
COL4A6-203ENST00000394872 TRNAU1APQ9NX07 287 aaKnown RBP10.08□□□□□ -0.8
COL4A6-203ENST00000394872 GRHPRQ9UBQ7 328 aa10.08□□□□□ -0.8
COL4A6-203ENST00000394872 ACSL5Q9ULC5 683 aa10.08□□□□□ -0.8
COL4A6-203ENST00000394872 PMF1-BGLAPU3KQ54 211 aa10.08□□□□□ -0.8
COL4A6-203ENST00000394872 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.07□□□□□ -0.8
COL4A6-203ENST00000394872 A0A1W2PRQ8 180 aa10.07□□□□□ -0.8
COL4A6-203ENST00000394872 EFCAB9A8MZ26 197 aa10.07□□□□□ -0.8
COL4A6-203ENST00000394872 ADAMTS3O15072 1205 aa10.07□□□□□ -0.8
COL4A6-203ENST00000394872 SEMA3DO95025 777 aa10.07□□□□□ -0.8
COL4A6-203ENST00000394872 SMSP52788 366 aa10.07□□□□□ -0.8
COL4A6-203ENST00000394872 CDK6Q00534 326 aa10.07□□□□□ -0.8
COL4A6-203ENST00000394872 PAMR1Q6UXH9 720 aa10.07□□□□□ -0.8
COL4A6-203ENST00000394872 ZNF554Q86TJ5 538 aa10.07□□□□□ -0.8
COL4A6-203ENST00000394872 C12orf76Q8N812 135 aaPredicted RBP10.07□□□□□ -0.8
COL4A6-203ENST00000394872 ZSCAN4Q8NAM6 433 aaPredicted RBP10.07□□□□□ -0.8
COL4A6-203ENST00000394872 NAT14Q8WUY8 206 aa10.07□□□□□ -0.8
COL4A6-203ENST00000394872 EZH1Q92800 747 aaPredicted RBP10.07□□□□□ -0.8
COL4A6-203ENST00000394872 GAL3ST3Q96A11 431 aa10.07□□□□□ -0.8
COL4A6-203ENST00000394872 NXPE2Q96DL1 559 aa10.07□□□□□ -0.8
COL4A6-203ENST00000394872 ANKRA2Q9H9E1 313 aa10.07□□□□□ -0.8
COL4A6-203ENST00000394872 CXorf21Q9HAI6 301 aa10.07□□□□□ -0.8
COL4A6-203ENST00000394872 C14orf105Q9NVL8 296 aa10.07□□□□□ -0.8
COL4A6-203ENST00000394872 TNFRSF10DQ9UBN6 386 aa10.07□□□□□ -0.8
COL4A6-203ENST00000394872 FAM159BA6NKW6 160 aa10.07□□□□□ -0.8
COL4A6-203ENST00000394872 KAT7O95251 611 aa10.07□□□□□ -0.8
COL4A6-203ENST00000394872 AHSA1O95433 338 aa10.07□□□□□ -0.8
COL4A6-203ENST00000394872 RLN2P04090 185 aa10.07□□□□□ -0.8
COL4A6-203ENST00000394872 CLRN1P58418 232 aa10.07□□□□□ -0.8
COL4A6-203ENST00000394872 RPL26P61254 145 aaKnown RBP10.07□□□□□ -0.8
COL4A6-203ENST00000394872 RNF220Q5VTB9 566 aa10.07□□□□□ -0.8
COL4A6-203ENST00000394872 ZC3HC1Q86WB0 502 aaKnown RBP10.07□□□□□ -0.8
COL4A6-203ENST00000394872 TMEM17Q86X19 198 aa10.07□□□□□ -0.8
COL4A6-203ENST00000394872 OR2L8Q8NGY9 312 aa10.07□□□□□ -0.8
COL4A6-203ENST00000394872 CMKLR1Q99788 373 aa10.07□□□□□ -0.8
COL4A6-203ENST00000394872 CD244Q9BZW8 370 aa10.07□□□□□ -0.8
COL4A6-203ENST00000394872 ZDHHC2Q9UIJ5 367 aa10.07□□□□□ -0.8
COL4A6-203ENST00000394872 E7EQ34 232 aa10.07□□□□□ -0.8
COL4A6-203ENST00000394872 VEGFDO43915 354 aa10.07□□□□□ -0.8
COL4A6-203ENST00000394872 C6orf47O95873 294 aa10.07□□□□□ -0.8
COL4A6-203ENST00000394872 ITGA5P08648 1049 aa10.07□□□□□ -0.8
COL4A6-203ENST00000394872 ST3GAL3Q11203 375 aa10.07□□□□□ -0.8
COL4A6-203ENST00000394872 ZNF267Q14586 743 aaPredicted RBP10.07□□□□□ -0.8
COL4A6-203ENST00000394872 OTUB2Q96DC9 234 aa10.07□□□□□ -0.8
COL4A6-203ENST00000394872 OR2M4Q96R27 311 aa10.07□□□□□ -0.8
COL4A6-203ENST00000394872 CGREF1Q99674 301 aa10.07□□□□□ -0.8
COL4A6-203ENST00000394872 GPR174Q9BXC1 333 aa10.07□□□□□ -0.8
COL4A6-203ENST00000394872 IL23AQ9NPF7 189 aa10.07□□□□□ -0.8
COL4A6-203ENST00000394872 FBXO9Q9UK97 447 aaPredicted RBP10.07□□□□□ -0.8
COL4A6-203ENST00000394872 POFUT2Q9Y2G5 429 aa10.07□□□□□ -0.8
COL4A6-203ENST00000394872 TMEM233B4DJY2 109 aa10.07□□□□□ -0.8
COL4A6-203ENST00000394872 ORC5O43913 435 aa10.07□□□□□ -0.8
COL4A6-203ENST00000394872 GJB5O95377 273 aa10.07□□□□□ -0.8
COL4A6-203ENST00000394872 CBLP22681 906 aa10.07□□□□□ -0.8
COL4A6-203ENST00000394872 SPATC1Q76KD6 591 aa10.07□□□□□ -0.8
COL4A6-203ENST00000394872 ZNF384Q8TF68 577 aa10.07□□□□□ -0.8
COL4A6-203ENST00000394872 ZNF641Q96N77 438 aaPredicted RBP10.07□□□□□ -0.8
COL4A6-203ENST00000394872 IL4I1Q96RQ9 567 aa10.07□□□□□ -0.8
COL4A6-203ENST00000394872 MRM3Q9HC36 420 aaKnown RBP10.07□□□□□ -0.8
COL4A6-203ENST00000394872 PRTFDC1Q9NRG1 225 aa10.07□□□□□ -0.8
COL4A6-203ENST00000394872 TELO2Q9Y4R8 837 aa10.07□□□□□ -0.8
COL4A6-203ENST00000394872 L7N2F9 121 aa10.07□□□□□ -0.8
COL4A6-203ENST00000394872 AGPSO00116 658 aa10.07□□□□□ -0.8
COL4A6-203ENST00000394872 ABLIM1O14639 778 aa10.07□□□□□ -0.8
COL4A6-203ENST00000394872 RNGTTO60942 597 aaKnown RBP10.07□□□□□ -0.8
COL4A6-203ENST00000394872 PAK4O96013 591 aaPredicted RBP10.07□□□□□ -0.8
COL4A6-203ENST00000394872 VAMP2P63027 116 aa10.07□□□□□ -0.8
COL4A6-203ENST00000394872 HERC3Q15034 1050 aa10.07□□□□□ -0.8
COL4A6-203ENST00000394872 RBM48Q5RL73 367 aaKnown RBP10.07□□□□□ -0.8
COL4A6-203ENST00000394872 CILP2Q8IUL8 1156 aa10.07□□□□□ -0.8
COL4A6-203ENST00000394872 SLITRK4Q8IW52 837 aa10.07□□□□□ -0.8
COL4A6-203ENST00000394872 SH3YL1Q96HL8 342 aaPredicted RBP10.07□□□□□ -0.8
COL4A6-203ENST00000394872 FKBP14Q9NWM8 211 aa10.07□□□□□ -0.8
COL4A6-203ENST00000394872 A0A1B0GVT2 93 aa10.06□□□□□ -0.8
COL4A6-203ENST00000394872 A6NCN8 305 aa10.06□□□□□ -0.8
COL4A6-203ENST00000394872 H3BSH0 61 aa10.06□□□□□ -0.8
COL4A6-203ENST00000394872 CH25HO95992 272 aa10.06□□□□□ -0.8
COL4A6-203ENST00000394872 HCKP08631 526 aa10.06□□□□□ -0.8
COL4A6-203ENST00000394872 EBLN1P0CF75 366 aa10.06□□□□□ -0.8
COL4A6-203ENST00000394872 UFM1P61960 85 aa10.06□□□□□ -0.8
COL4A6-203ENST00000394872 LMAN2Q12907 356 aa10.06□□□□□ -0.8
COL4A6-203ENST00000394872 ZNF234Q14588 700 aa10.06□□□□□ -0.8
COL4A6-203ENST00000394872 KHDC1Q4VXA5 237 aaKnown RBP10.06□□□□□ -0.8
COL4A6-203ENST00000394872 SPIN3Q5JUX0 258 aa10.06□□□□□ -0.8
COL4A6-203ENST00000394872 ANKRD26P1Q6NSI1 321 aa10.06□□□□□ -0.8
COL4A6-203ENST00000394872 NIPAL1Q6NVV3 410 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms