RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 NAGSQ8N159 534 aa13□□□□□ -0.33
GTF2F1-201ENST00000394456 C12orf76Q8N812 135 aaPredicted RBP13□□□□□ -0.33
GTF2F1-201ENST00000394456 WDR20Q8TBZ3 569 aa13□□□□□ -0.33
GTF2F1-201ENST00000394456 APH1BQ8WW43 257 aa13□□□□□ -0.33
GTF2F1-201ENST00000394456 TRUB1Q8WWH5 349 aaKnown RBP13□□□□□ -0.33
GTF2F1-201ENST00000394456 TPT1P8Q9HAU6 139 aa13□□□□□ -0.33
GTF2F1-201ENST00000394456 THUMPD1Q9NXG2 353 aaKnown RBP13□□□□□ -0.33
GTF2F1-201ENST00000394456 EXO1Q9UQ84 846 aaKnown RBP13□□□□□ -0.33
GTF2F1-201ENST00000394456 ERGIC3Q9Y282 383 aa13□□□□□ -0.33
GTF2F1-201ENST00000394456 TESMINQ9Y4I5 508 aa13□□□□□ -0.33
GTF2F1-201ENST00000394456 TMEM247A6NEH6 219 aa13□□□□□ -0.33
GTF2F1-201ENST00000394456 EPN2O95208 641 aa13□□□□□ -0.33
GTF2F1-201ENST00000394456 SLC16A8O95907 504 aa13□□□□□ -0.33
GTF2F1-201ENST00000394456 POLR2EP19388 210 aaKnown RBP13□□□□□ -0.33
GTF2F1-201ENST00000394456 DDX6P26196 483 aaKnown RBP eCLIP13□□□□□ -0.33
GTF2F1-201ENST00000394456 RECQLP46063 649 aaPredicted RBP13□□□□□ -0.33
GTF2F1-201ENST00000394456 RXRGP48443 463 aa13□□□□□ -0.33
GTF2F1-201ENST00000394456 RELAQ04206 551 aa13□□□□□ -0.33
GTF2F1-201ENST00000394456 MAD2L1BPQ15013 274 aaPredicted RBP13□□□□□ -0.33
GTF2F1-201ENST00000394456 GGTA1PQ4G0N0 100 aa13□□□□□ -0.33
GTF2F1-201ENST00000394456 SOWAHCQ53LP3 525 aaPredicted RBP13□□□□□ -0.33
GTF2F1-201ENST00000394456 PAGE2BQ5JRK9 111 aa13□□□□□ -0.33
GTF2F1-201ENST00000394456 CATSPEREQ5SY80 951 aa13□□□□□ -0.33
GTF2F1-201ENST00000394456 GPR155Q7Z3F1 870 aa13□□□□□ -0.33
GTF2F1-201ENST00000394456 MMP21Q8N119 569 aa13□□□□□ -0.33
GTF2F1-201ENST00000394456 RORBQ92753 470 aa13□□□□□ -0.33
GTF2F1-201ENST00000394456 DNASE1L2Q92874 299 aa13□□□□□ -0.33
GTF2F1-201ENST00000394456 CPEB1Q9BZB8 566 aaKnown RBP13□□□□□ -0.33
GTF2F1-201ENST00000394456 TM9SF3Q9HD45 589 aa13□□□□□ -0.33
GTF2F1-201ENST00000394456 BLOC1S6Q9UL45 172 aa13□□□□□ -0.33
GTF2F1-201ENST00000394456 FZD4Q9ULV1 537 aa13□□□□□ -0.33
GTF2F1-201ENST00000394456 SAMD4AQ9UPU9 718 aaKnown RBP13□□□□□ -0.33
GTF2F1-201ENST00000394456 ERVW-1Q9UQF0 538 aa13□□□□□ -0.33
GTF2F1-201ENST00000394456 PRAMEF25A6NGN4 478 aa12.99□□□□□ -0.33
GTF2F1-201ENST00000394456 FAM20BO75063 409 aa12.99□□□□□ -0.33
GTF2F1-201ENST00000394456 LEFTY1O75610 366 aa12.99□□□□□ -0.33
GTF2F1-201ENST00000394456 NADKO95544 446 aaPredicted RBP12.99□□□□□ -0.33
GTF2F1-201ENST00000394456 C8GP07360 202 aa12.99□□□□□ -0.33
GTF2F1-201ENST00000394456 BMP4P12644 408 aa12.99□□□□□ -0.33
GTF2F1-201ENST00000394456 ACVR2AP27037 513 aa12.99□□□□□ -0.33
GTF2F1-201ENST00000394456 C21orf33P30042 268 aaPredicted RBP12.99□□□□□ -0.33
GTF2F1-201ENST00000394456 NUDT6P53370 316 aa12.99□□□□□ -0.33
GTF2F1-201ENST00000394456 RPP38P78345 283 aaKnown RBP12.99□□□□□ -0.33
GTF2F1-201ENST00000394456 EPS8Q12929 822 aa12.99□□□□□ -0.33
GTF2F1-201ENST00000394456 DNASE1L3Q13609 305 aa12.99□□□□□ -0.33
GTF2F1-201ENST00000394456 CLCA4Q14CN2 919 aa12.99□□□□□ -0.33
GTF2F1-201ENST00000394456 PRSS53Q2L4Q9 553 aa12.99□□□□□ -0.33
GTF2F1-201ENST00000394456 ARSIQ5FYB1 569 aa12.99□□□□□ -0.33
GTF2F1-201ENST00000394456 CAPN13Q6MZZ7 669 aaPredicted RBP12.99□□□□□ -0.33
GTF2F1-201ENST00000394456 ANGPTL8Q6UXH0 198 aa12.99□□□□□ -0.33
GTF2F1-201ENST00000394456 SERPINA11Q86U17 422 aa12.99□□□□□ -0.33
GTF2F1-201ENST00000394456 FAM124AQ86V42 546 aa12.99□□□□□ -0.33
GTF2F1-201ENST00000394456 CHPT1Q8WUD6 406 aa12.99□□□□□ -0.33
GTF2F1-201ENST00000394456 LZICQ8WZA0 190 aa12.99□□□□□ -0.33
GTF2F1-201ENST00000394456 PROX1Q92786 737 aa12.99□□□□□ -0.33
GTF2F1-201ENST00000394456 MAGED4Q96JG8 741 aa12.99□□□□□ -0.33
GTF2F1-201ENST00000394456 NEURL2Q9BR09 285 aa12.99□□□□□ -0.33
GTF2F1-201ENST00000394456 DUSP21Q9H596 190 aa12.99□□□□□ -0.33
GTF2F1-201ENST00000394456 EPS8L2Q9H6S3 715 aa12.99□□□□□ -0.33
GTF2F1-201ENST00000394456 KRT84Q9NSB2 600 aa12.99□□□□□ -0.33
GTF2F1-201ENST00000394456 GPATCH2Q9NW75 528 aa12.99□□□□□ -0.33
GTF2F1-201ENST00000394456 VPS29Q9UBQ0 182 aa12.99□□□□□ -0.33
GTF2F1-201ENST00000394456 ZSCAN9O15535 394 aaPredicted RBP12.99□□□□□ -0.33
GTF2F1-201ENST00000394456 ADAM23O75077 832 aa12.99□□□□□ -0.33
GTF2F1-201ENST00000394456 CCDC159P0C7I6 412 aa12.99□□□□□ -0.33
GTF2F1-201ENST00000394456 GPX2P18283 190 aa12.99□□□□□ -0.33
GTF2F1-201ENST00000394456 HPCAL1P37235 193 aa12.99□□□□□ -0.33
GTF2F1-201ENST00000394456 BCAP31P51572 246 aa12.99□□□□□ -0.33
GTF2F1-201ENST00000394456 PSRC1Q6PGN9 363 aaPredicted RBP12.99□□□□□ -0.33
GTF2F1-201ENST00000394456 NLGN4XQ8N0W4 816 aa12.99□□□□□ -0.33
GTF2F1-201ENST00000394456 C2orf73Q8N5S3 287 aaPredicted RBP12.99□□□□□ -0.33
GTF2F1-201ENST00000394456 RASGEF1AQ8N9B8 481 aa12.99□□□□□ -0.33
GTF2F1-201ENST00000394456 YIPF6Q96EC8 236 aa12.99□□□□□ -0.33
GTF2F1-201ENST00000394456 C7orf34Q96L11 122 aa12.99□□□□□ -0.33
GTF2F1-201ENST00000394456 CEP44Q9C0F1 390 aa12.99□□□□□ -0.33
GTF2F1-201ENST00000394456 RNF167Q9H6Y7 350 aa12.99□□□□□ -0.33
GTF2F1-201ENST00000394456 SGK2Q9HBY8 427 aa12.99□□□□□ -0.33
GTF2F1-201ENST00000394456 KIF17Q9P2E2 1029 aa12.99□□□□□ -0.33
GTF2F1-201ENST00000394456 MRPS23Q9Y3D9 190 aaKnown RBP12.99□□□□□ -0.33
GTF2F1-201ENST00000394456 J3KTA2 159 aa12.98□□□□□ -0.33
GTF2F1-201ENST00000394456 GABARAPO95166 117 aa12.98□□□□□ -0.33
GTF2F1-201ENST00000394456 FGF19O95750 216 aa12.98□□□□□ -0.33
GTF2F1-201ENST00000394456 CTSLP07711 333 aa12.98□□□□□ -0.33
GTF2F1-201ENST00000394456 ETFAP13804 333 aa12.98□□□□□ -0.33
GTF2F1-201ENST00000394456 PRPS1L1P21108 318 aa12.98□□□□□ -0.33
GTF2F1-201ENST00000394456 RRM2P31350 389 aa12.98□□□□□ -0.33
GTF2F1-201ENST00000394456 DNAJA1P31689 397 aaKnown RBP12.98□□□□□ -0.33
GTF2F1-201ENST00000394456 CRISP3P54108 245 aa12.98□□□□□ -0.33
GTF2F1-201ENST00000394456 KCNJ10P78508 379 aa12.98□□□□□ -0.33
GTF2F1-201ENST00000394456 ACSM2AQ08AH3 577 aa12.98□□□□□ -0.33
GTF2F1-201ENST00000394456 MESP2Q0VG99 397 aa12.98□□□□□ -0.33
GTF2F1-201ENST00000394456 MAPK11Q15759 364 aa12.98□□□□□ -0.33
GTF2F1-201ENST00000394456 ACSM2BQ68CK6 577 aa12.98□□□□□ -0.33
GTF2F1-201ENST00000394456 FAM109BQ6ICB4 259 aaPredicted RBP12.98□□□□□ -0.33
GTF2F1-201ENST00000394456 AGTRAPQ6RW13 159 aa12.98□□□□□ -0.33
GTF2F1-201ENST00000394456 GALNT13Q8IUC8 556 aa12.98□□□□□ -0.33
GTF2F1-201ENST00000394456 OR5AK3PQ8NH89 298 aa12.98□□□□□ -0.33
GTF2F1-201ENST00000394456 CIDECQ96AQ7 238 aaPredicted RBP12.98□□□□□ -0.33
GTF2F1-201ENST00000394456 ZFYVE19Q96K21 471 aa12.98□□□□□ -0.33
GTF2F1-201ENST00000394456 ALPK1Q96QP1 1244 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms