RNA–Protein interactions for RNA: ENST00000394084.5

GAPVD1-205, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-205ENST00000394084 HTRA1Q92743 480 aa13.45□□□□□ -0.26
GAPVD1-205ENST00000394084 ABHD8Q96I13 439 aa13.45□□□□□ -0.26
GAPVD1-205ENST00000394084 HEPHQ9BQS7 1158 aa13.45□□□□□ -0.26
GAPVD1-205ENST00000394084 RNF167Q9H6Y7 350 aa13.45□□□□□ -0.26
GAPVD1-205ENST00000394084 MRPL17Q9NRX2 175 aaKnown RBP13.45□□□□□ -0.26
GAPVD1-205ENST00000394084 RAD18Q9NS91 495 aa13.45□□□□□ -0.26
GAPVD1-205ENST00000394084 ADPRHL2Q9NX46 363 aa13.45□□□□□ -0.26
GAPVD1-205ENST00000394084 ZNF106Q9H2Y7 1883 aaKnown RBP13.45□□□□□ -0.26
GAPVD1-205ENST00000394084 TNFRSF11BO00300 401 aa13.44□□□□□ -0.26
GAPVD1-205ENST00000394084 CNOT3O75175 753 aaKnown RBP13.44□□□□□ -0.26
GAPVD1-205ENST00000394084 EFEMP2O95967 443 aa13.44□□□□□ -0.26
GAPVD1-205ENST00000394084 HLA-FP30511 346 aa13.44□□□□□ -0.26
GAPVD1-205ENST00000394084 SEPHS1P49903 392 aa13.44□□□□□ -0.26
GAPVD1-205ENST00000394084 MPPE1Q53F39 396 aa13.44□□□□□ -0.26
GAPVD1-205ENST00000394084 TTC23LQ6PF05 361 aa13.44□□□□□ -0.26
GAPVD1-205ENST00000394084 SLC5A8Q8N695 610 aa13.44□□□□□ -0.26
GAPVD1-205ENST00000394084 OR4K1Q8NGD4 311 aa13.44□□□□□ -0.26
GAPVD1-205ENST00000394084 IPCEF1Q8WWN9 437 aaPredicted RBP13.44□□□□□ -0.26
GAPVD1-205ENST00000394084 SLC38A4Q969I6 547 aa13.44□□□□□ -0.26
GAPVD1-205ENST00000394084 PITX2Q99697 317 aa13.44□□□□□ -0.26
GAPVD1-205ENST00000394084 KLHL25Q9H0H3 589 aa13.44□□□□□ -0.26
GAPVD1-205ENST00000394084 MIR1-1HGQ9H1L0 117 aa13.44□□□□□ -0.26
GAPVD1-205ENST00000394084 KLHL42Q9P2K6 505 aa13.44□□□□□ -0.26
GAPVD1-205ENST00000394084 OSGIN1Q9UJX0 560 aa13.44□□□□□ -0.26
GAPVD1-205ENST00000394084 M0R082 166 aa13.44□□□□□ -0.26
GAPVD1-205ENST00000394084 SOD2P04179 222 aa13.44□□□□□ -0.26
GAPVD1-205ENST00000394084 AP1S2P56377 157 aa13.44□□□□□ -0.26
GAPVD1-205ENST00000394084 CSTF3Q12996 717 aaKnown RBP13.44□□□□□ -0.26
GAPVD1-205ENST00000394084 RGNQ15493 299 aa13.44□□□□□ -0.26
GAPVD1-205ENST00000394084 COX20Q5RI15 118 aa13.44□□□□□ -0.26
GAPVD1-205ENST00000394084 Q6ZVL8 140 aa13.44□□□□□ -0.26
GAPVD1-205ENST00000394084 GPR155Q7Z3F1 870 aa13.44□□□□□ -0.26
GAPVD1-205ENST00000394084 TSEN54Q7Z6J9 526 aaKnown RBP13.44□□□□□ -0.26
GAPVD1-205ENST00000394084 CCDC103Q8IW40 242 aa13.44□□□□□ -0.26
GAPVD1-205ENST00000394084 OR4A15Q8NGL6 344 aa13.44□□□□□ -0.26
GAPVD1-205ENST00000394084 FIBINQ8TAL6 211 aa13.44□□□□□ -0.26
GAPVD1-205ENST00000394084 UTP15Q8TED0 518 aaKnown RBP13.44□□□□□ -0.26
GAPVD1-205ENST00000394084 MGAT4DA6NG13 374 aa13.44□□□□□ -0.26
GAPVD1-205ENST00000394084 TBX1O43435 398 aa13.44□□□□□ -0.26
GAPVD1-205ENST00000394084 ETFAP13804 333 aa13.44□□□□□ -0.26
GAPVD1-205ENST00000394084 POU2F1P14859 743 aa13.44□□□□□ -0.26
GAPVD1-205ENST00000394084 PTPN5P54829 565 aa13.44□□□□□ -0.26
GAPVD1-205ENST00000394084 CDH12P55289 794 aa13.44□□□□□ -0.26
GAPVD1-205ENST00000394084 RAE1P78406 368 aaKnown RBP13.44□□□□□ -0.26
GAPVD1-205ENST00000394084 VEZF1Q14119 521 aa13.44□□□□□ -0.26
GAPVD1-205ENST00000394084 TIGD6Q17RP2 521 aa13.44□□□□□ -0.26
GAPVD1-205ENST00000394084 POM121L1PQ3SYA9 428 aa13.44□□□□□ -0.26
GAPVD1-205ENST00000394084 PLEKHS1Q5SXH7 462 aa13.44□□□□□ -0.26
GAPVD1-205ENST00000394084 AGTRAPQ6RW13 159 aa13.44□□□□□ -0.26
GAPVD1-205ENST00000394084 GAREM2Q75VX8 874 aa13.44□□□□□ -0.26
GAPVD1-205ENST00000394084 NPAS3Q8IXF0 933 aa13.44□□□□□ -0.26
GAPVD1-205ENST00000394084 ECHDC3Q96DC8 303 aa13.44□□□□□ -0.26
GAPVD1-205ENST00000394084 TMEM169Q96HH4 297 aa13.44□□□□□ -0.26
GAPVD1-205ENST00000394084 HRASLS5Q96KN8 279 aa13.44□□□□□ -0.26
GAPVD1-205ENST00000394084 FCRL1Q96LA6 429 aa13.44□□□□□ -0.26
GAPVD1-205ENST00000394084 GPR83Q9NYM4 423 aa13.44□□□□□ -0.26
GAPVD1-205ENST00000394084 SRRDQ9UH36 339 aa13.44□□□□□ -0.26
GAPVD1-205ENST00000394084 PCDHGB3Q9Y5G1 929 aa13.44□□□□□ -0.26
GAPVD1-205ENST00000394084 TMEM229AB2RXF0 380 aa13.43□□□□□ -0.26
GAPVD1-205ENST00000394084 EIF3FO00303 357 aaPredicted RBP13.43□□□□□ -0.26
GAPVD1-205ENST00000394084 PRMT3O60678 531 aa13.43□□□□□ -0.26
GAPVD1-205ENST00000394084 GCM2O75603 506 aaPredicted RBP13.43□□□□□ -0.26
GAPVD1-205ENST00000394084 PBLDP30039 288 aaPredicted RBP13.43□□□□□ -0.26
GAPVD1-205ENST00000394084 GRK5P34947 590 aa13.43□□□□□ -0.26
GAPVD1-205ENST00000394084 SP140Q13342 867 aa13.43□□□□□ -0.26
GAPVD1-205ENST00000394084 LIPJQ5W064 366 aa13.43□□□□□ -0.26
GAPVD1-205ENST00000394084 HSD11B1LQ7Z5J1 315 aa13.43□□□□□ -0.26
GAPVD1-205ENST00000394084 RHOXF1Q8NHV9 184 aa13.43□□□□□ -0.26
GAPVD1-205ENST00000394084 CD99L2Q8TCZ2 262 aa13.43□□□□□ -0.26
GAPVD1-205ENST00000394084 SAMD11Q96NU1 681 aa13.43□□□□□ -0.26
GAPVD1-205ENST00000394084 OR4K3Q96R72 315 aa13.43□□□□□ -0.26
GAPVD1-205ENST00000394084 MCCC1Q96RQ3 725 aaPredicted RBP13.43□□□□□ -0.26
GAPVD1-205ENST00000394084 C19orf43Q9BQ61 176 aa13.43□□□□□ -0.26
GAPVD1-205ENST00000394084 EPS8L2Q9H6S3 715 aa13.43□□□□□ -0.26
GAPVD1-205ENST00000394084 SPATA6Q9NWH7 488 aaPredicted RBP13.43□□□□□ -0.26
GAPVD1-205ENST00000394084 ACSL6Q9UKU0 697 aa13.43□□□□□ -0.26
GAPVD1-205ENST00000394084 LYVE1Q9Y5Y7 322 aa13.43□□□□□ -0.26
GAPVD1-205ENST00000394084 SAP18O00422 153 aaKnown RBP13.43□□□□□ -0.26
GAPVD1-205ENST00000394084 STSP08842 583 aa13.43□□□□□ -0.26
GAPVD1-205ENST00000394084 ALOX5P09917 674 aa13.43□□□□□ -0.26
GAPVD1-205ENST00000394084 ETV3P41162 512 aa13.43□□□□□ -0.26
GAPVD1-205ENST00000394084 DGKEP52429 567 aa13.43□□□□□ -0.26
GAPVD1-205ENST00000394084 SPIBQ01892 262 aa13.43□□□□□ -0.26
GAPVD1-205ENST00000394084 PPIGQ13427 754 aaKnown RBP eCLIP13.43□□□□□ -0.264e-6■■□□□ 12.9
GAPVD1-205ENST00000394084 SYTL3Q4VX76 610 aa13.43□□□□□ -0.26
GAPVD1-205ENST00000394084 UBE2UQ5VVX9 321 aa13.43□□□□□ -0.26
GAPVD1-205ENST00000394084 OR10G2Q8NGC3 310 aa13.43□□□□□ -0.26
GAPVD1-205ENST00000394084 ASZ1Q8WWH4 475 aa13.43□□□□□ -0.26
GAPVD1-205ENST00000394084 MRPS31Q92665 395 aaKnown RBP13.43□□□□□ -0.26
GAPVD1-205ENST00000394084 GGHQ92820 318 aa13.43□□□□□ -0.26
GAPVD1-205ENST00000394084 ITPKCQ96DU7 683 aa13.43□□□□□ -0.26
GAPVD1-205ENST00000394084 SIGLEC11Q96RL6 698 aa13.43□□□□□ -0.26
GAPVD1-205ENST00000394084 EPYCQ99645 322 aa13.43□□□□□ -0.26
GAPVD1-205ENST00000394084 TSEN34Q9BSV6 310 aaKnown RBP13.43□□□□□ -0.26
GAPVD1-205ENST00000394084 DOHHQ9BU89 302 aa13.43□□□□□ -0.26
GAPVD1-205ENST00000394084 TMEM121BQ9BXQ6 578 aaPredicted RBP13.43□□□□□ -0.26
GAPVD1-205ENST00000394084 ROGDIQ9GZN7 287 aa13.43□□□□□ -0.26
GAPVD1-205ENST00000394084 NDUFAF4Q9P032 175 aa13.43□□□□□ -0.26
GAPVD1-205ENST00000394084 SCHIP1Q9P0W5 487 aaPredicted RBP13.43□□□□□ -0.26
GAPVD1-205ENST00000394084 C1orf226A1L170 272 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms