RNA–Protein interactions for RNA: ENST00000393952.3

LRFN4-202, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 5 BASIC

Gene LRFN4, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-202ENST00000393952 RSL1D1O76021 490 aaKnown RBP23.23■■□□□ 1.31
LRFN4-202ENST00000393952 TBX6O95947 436 aaPredicted RBP23.23■■□□□ 1.31
LRFN4-202ENST00000393952 C9P02748 559 aa23.23■■□□□ 1.31
LRFN4-202ENST00000393952 CKMT2P17540 419 aa23.23■■□□□ 1.31
LRFN4-202ENST00000393952 AHRP35869 848 aa23.23■■□□□ 1.31
LRFN4-202ENST00000393952 METTL21CQ5VZV1 264 aa23.23■■□□□ 1.31
LRFN4-202ENST00000393952 TTLQ8NG68 377 aa23.23■■□□□ 1.31
LRFN4-202ENST00000393952 CREB3L4Q8TEY5 395 aa23.23■■□□□ 1.31
LRFN4-202ENST00000393952 OR51B5Q9H339 312 aa23.23■■□□□ 1.31
LRFN4-202ENST00000393952 C1orf109Q9NX04 203 aa23.23■■□□□ 1.31
LRFN4-202ENST00000393952 VPS29Q9UBQ0 182 aa23.23■■□□□ 1.31
LRFN4-202ENST00000393952 FTSJ1Q9UET6 329 aa23.23■■□□□ 1.31
LRFN4-202ENST00000393952 ATXN7L1Q9ULK2 861 aaPredicted RBP23.23■■□□□ 1.31
LRFN4-202ENST00000393952 AP1M2Q9Y6Q5 423 aa23.23■■□□□ 1.31
LRFN4-202ENST00000393952 EP300Q09472 2414 aaPredicted RBP23.22■■□□□ 1.31
LRFN4-202ENST00000393952 IGHV5-51A0A0C4DH38 117 aa23.22■■□□□ 1.31
LRFN4-202ENST00000393952 DCTN3O75935 186 aa23.22■■□□□ 1.31
LRFN4-202ENST00000393952 SERPIND1P05546 499 aa23.22■■□□□ 1.31
LRFN4-202ENST00000393952 SERPINA6P08185 405 aa23.22■■□□□ 1.31
LRFN4-202ENST00000393952 ALDOCP09972 364 aaKnown RBP23.22■■□□□ 1.31
LRFN4-202ENST00000393952 PRPH2P23942 346 aa23.22■■□□□ 1.31
LRFN4-202ENST00000393952 OGFOD2Q6N063 350 aa23.22■■□□□ 1.31
LRFN4-202ENST00000393952 WDR74Q6RFH5 385 aaPredicted RBP23.22■■□□□ 1.31
LRFN4-202ENST00000393952 CHSY3Q70JA7 882 aa23.22■■□□□ 1.31
LRFN4-202ENST00000393952 RNF44Q7L0R7 432 aa23.22■■□□□ 1.31
LRFN4-202ENST00000393952 ZFAND4Q86XD8 727 aa23.22■■□□□ 1.31
LRFN4-202ENST00000393952 NAXDQ8IW45 347 aa23.22■■□□□ 1.31
LRFN4-202ENST00000393952 FNDC5Q8NAU1 212 aa23.22■■□□□ 1.31
LRFN4-202ENST00000393952 CMTM7Q96FZ5 175 aa23.22■■□□□ 1.31
LRFN4-202ENST00000393952 APIPQ96GX9 242 aa23.22■■□□□ 1.31
LRFN4-202ENST00000393952 ZFYVE21Q9BQ24 234 aa23.22■■□□□ 1.31
LRFN4-202ENST00000393952 C1orf50Q9BV19 199 aa23.22■■□□□ 1.31
LRFN4-202ENST00000393952 MS4A8Q9BY19 250 aa23.22■■□□□ 1.31
LRFN4-202ENST00000393952 LRRN3Q9H3W5 708 aa23.22■■□□□ 1.31
LRFN4-202ENST00000393952 SYNDIG1Q9H7V2 258 aa23.22■■□□□ 1.31
LRFN4-202ENST00000393952 FAM60AQ9NP50 221 aa23.22■■□□□ 1.31
LRFN4-202ENST00000393952 PPT2Q9UMR5 302 aa23.22■■□□□ 1.31
LRFN4-202ENST00000393952 TRIM33Q9UPN9 1127 aa23.22■■□□□ 1.31
LRFN4-202ENST00000393952 NPIPB8E9PQR5 432 aa23.21■■□□□ 1.31
LRFN4-202ENST00000393952 UBDO15205 165 aa23.21■■□□□ 1.31
LRFN4-202ENST00000393952 SEC22BO75396 215 aa23.21■■□□□ 1.31
LRFN4-202ENST00000393952 RASSF9O75901 435 aa23.21■■□□□ 1.31
LRFN4-202ENST00000393952 RPL38P63173 70 aaKnown RBP23.21■■□□□ 1.31
LRFN4-202ENST00000393952 RELAQ04206 551 aa23.21■■□□□ 1.31
LRFN4-202ENST00000393952 SQSTM1Q13501 440 aa23.21■■□□□ 1.31
LRFN4-202ENST00000393952 RFTN2Q52LD8 501 aaPredicted RBP23.21■■□□□ 1.31
LRFN4-202ENST00000393952 SNAP47Q5SQN1 464 aa23.21■■□□□ 1.31
LRFN4-202ENST00000393952 CACHD1Q5VU97 1274 aa23.21■■□□□ 1.31
LRFN4-202ENST00000393952 FOXR1Q6PIV2 292 aa23.21■■□□□ 1.31
LRFN4-202ENST00000393952 VN1R4Q7Z5H5 301 aa23.21■■□□□ 1.31
LRFN4-202ENST00000393952 OR2A5Q96R48 311 aa23.21■■□□□ 1.31
LRFN4-202ENST00000393952 SERPINI1Q99574 410 aa23.21■■□□□ 1.31
LRFN4-202ENST00000393952 MACROD1Q9BQ69 325 aa23.21■■□□□ 1.31
LRFN4-202ENST00000393952 MYLK2Q9H1R3 596 aa23.21■■□□□ 1.31
LRFN4-202ENST00000393952 SAR1AQ9NR31 198 aa23.21■■□□□ 1.31
LRFN4-202ENST00000393952 GDF9O60383 454 aa23.2■■□□□ 1.3
LRFN4-202ENST00000393952 CCDC22O60826 627 aa23.2■■□□□ 1.3
LRFN4-202ENST00000393952 CLEC3AO75596 197 aa23.2■■□□□ 1.3
LRFN4-202ENST00000393952 PTX3P26022 381 aaPredicted RBP23.2■■□□□ 1.3
LRFN4-202ENST00000393952 GSTM2P28161 218 aa23.2■■□□□ 1.3
LRFN4-202ENST00000393952 ERVK-8P63133 956 aa23.2■■□□□ 1.3
LRFN4-202ENST00000393952 UBAP2LQ14157 1087 aaKnown RBP23.2■■□□□ 1.3
LRFN4-202ENST00000393952 TMPRSS9Q7Z410 1059 aa23.2■■□□□ 1.3
LRFN4-202ENST00000393952 SPATA19Q7Z5L4 167 aa23.2■■□□□ 1.3
LRFN4-202ENST00000393952 FITM2Q8N6M3 262 aa23.2■■□□□ 1.3
LRFN4-202ENST00000393952 LRRC37BQ96QE4 947 aa23.2■■□□□ 1.3
LRFN4-202ENST00000393952 MRPL1Q9BYD6 325 aaKnown RBP23.2■■□□□ 1.3
LRFN4-202ENST00000393952 SAP18O00422 153 aaKnown RBP23.19■■□□□ 1.3
LRFN4-202ENST00000393952 TBL3Q12788 808 aaKnown RBP23.19■■□□□ 1.3
LRFN4-202ENST00000393952 KIAA0040Q15053 153 aa23.19■■□□□ 1.3
LRFN4-202ENST00000393952 FRMPD2BQ6IN97 320 aa23.19■■□□□ 1.3
LRFN4-202ENST00000393952 TRPV3Q8NET8 790 aa23.19■■□□□ 1.3
LRFN4-202ENST00000393952 ERP27Q96DN0 273 aa23.19■■□□□ 1.3
LRFN4-202ENST00000393952 THAP11Q96EK4 314 aa23.19■■□□□ 1.3
LRFN4-202ENST00000393952 TCTN2Q96GX1 697 aa23.19■■□□□ 1.3
LRFN4-202ENST00000393952 F2RL3Q96RI0 385 aa23.19■■□□□ 1.3
LRFN4-202ENST00000393952 ZNF385DQ9H6B1 395 aa23.19■■□□□ 1.3
LRFN4-202ENST00000393952 ARMCX1Q9P291 453 aa23.19■■□□□ 1.3
LRFN4-202ENST00000393952 LOC105369274A0A096LPK9 316 aa23.18■■□□□ 1.3
LRFN4-202ENST00000393952 LOC102723532A0A0G2JNH3 316 aa23.18■■□□□ 1.3
LRFN4-202ENST00000393952 NDUFS4O43181 175 aa23.18■■□□□ 1.3
LRFN4-202ENST00000393952 HCRTR1O43613 425 aa23.18■■□□□ 1.3
LRFN4-202ENST00000393952 CPNE6O95741 557 aa23.18■■□□□ 1.3
LRFN4-202ENST00000393952 ACP1P24666 158 aa23.18■■□□□ 1.3
LRFN4-202ENST00000393952 HNRNPH1P31943 449 aaKnown RBP23.18■■□□□ 1.3
LRFN4-202ENST00000393952 DIO3P55073 304 aa23.18■■□□□ 1.3
LRFN4-202ENST00000393952 EMX2Q04743 252 aa23.18■■□□□ 1.3
LRFN4-202ENST00000393952 DEFB110Q30KQ9 67 aa23.18■■□□□ 1.3
LRFN4-202ENST00000393952 DEPDC1Q5TB30 811 aa23.18■■□□□ 1.3
LRFN4-202ENST00000393952 KHDRBS2Q5VWX1 349 aaKnown RBP23.18■■□□□ 1.3
LRFN4-202ENST00000393952 TMEM71Q6P5X7 295 aa23.18■■□□□ 1.3
LRFN4-202ENST00000393952 ZNF574Q6ZN55 896 aaPredicted RBP23.18■■□□□ 1.3
LRFN4-202ENST00000393952 TRPM8Q7Z2W7 1104 aa23.18■■□□□ 1.3
LRFN4-202ENST00000393952 ASPGQ86U10 573 aa23.18■■□□□ 1.3
LRFN4-202ENST00000393952 OR4N4Q8N0Y3 316 aa23.18■■□□□ 1.3
LRFN4-202ENST00000393952 DNAJC22Q8N4W6 341 aa23.18■■□□□ 1.3
LRFN4-202ENST00000393952 C1orf52Q8N6N3 182 aaKnown RBP23.18■■□□□ 1.3
LRFN4-202ENST00000393952 SLC13A3Q8WWT9 602 aa23.18■■□□□ 1.3
LRFN4-202ENST00000393952 AICDAQ9GZX7 198 aa23.18■■□□□ 1.3
LRFN4-202ENST00000393952 NMRK1Q9NWW6 199 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms