RNA–Protein interactions for RNA: ENST00000393943.9

GABRA1-202, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-202ENST00000393943 FAM109AQ8N4B1 249 aa8.35□□□□□ -1.07
GABRA1-202ENST00000393943 C1orf52Q8N6N3 182 aaKnown RBP8.35□□□□□ -1.07
GABRA1-202ENST00000393943 CHFRQ96EP1 664 aa8.35□□□□□ -1.07
GABRA1-202ENST00000393943 C11orf24Q96F05 449 aaPredicted RBP8.35□□□□□ -1.07
GABRA1-202ENST00000393943 BBS4Q96RK4 519 aa8.35□□□□□ -1.07
GABRA1-202ENST00000393943 NTMT1Q9BV86 223 aa8.35□□□□□ -1.07
GABRA1-202ENST00000393943 TRIM8Q9BZR9 551 aa8.35□□□□□ -1.07
GABRA1-202ENST00000393943 BTBD1Q9H0C5 482 aa8.35□□□□□ -1.07
GABRA1-202ENST00000393943 ABCB9Q9NP78 766 aa8.35□□□□□ -1.07
GABRA1-202ENST00000393943 ENTPD4Q9Y227 616 aa8.35□□□□□ -1.07
GABRA1-202ENST00000393943 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.34□□□□□ -1.07
GABRA1-202ENST00000393943 A0A1B0GTW7 788 aa8.34□□□□□ -1.07
GABRA1-202ENST00000393943 UNCXA6NJT0 531 aa8.34□□□□□ -1.07
GABRA1-202ENST00000393943 I3L521 148 aa8.34□□□□□ -1.07
GABRA1-202ENST00000393943 AP3D1O14617 1153 aa8.34□□□□□ -1.07
GABRA1-202ENST00000393943 PLD2O14939 933 aa8.34□□□□□ -1.07
GABRA1-202ENST00000393943 LDB2O43679 373 aa8.34□□□□□ -1.07
GABRA1-202ENST00000393943 HMGN1P05114 100 aa8.34□□□□□ -1.07
GABRA1-202ENST00000393943 NUP62P37198 522 aaPredicted RBP8.34□□□□□ -1.07
GABRA1-202ENST00000393943 DGKGP49619 791 aa8.34□□□□□ -1.07
GABRA1-202ENST00000393943 NUDT6P53370 316 aa8.34□□□□□ -1.07
GABRA1-202ENST00000393943 SLC16A1P53985 500 aa8.34□□□□□ -1.07
GABRA1-202ENST00000393943 CRISP1P54107 249 aa8.34□□□□□ -1.07
GABRA1-202ENST00000393943 EPHB3P54753 998 aa8.34□□□□□ -1.07
GABRA1-202ENST00000393943 PSMD4P55036 377 aaKnown RBP8.34□□□□□ -1.07
GABRA1-202ENST00000393943 MXD1Q05195 221 aa8.34□□□□□ -1.07
GABRA1-202ENST00000393943 WDR45BQ5MNZ6 344 aa8.34□□□□□ -1.07
GABRA1-202ENST00000393943 MEIOBQ8N635 442 aa8.34□□□□□ -1.07
GABRA1-202ENST00000393943 NETO1Q8TDF5 533 aa8.34□□□□□ -1.07
GABRA1-202ENST00000393943 HRASLS5Q96KN8 279 aa8.34□□□□□ -1.07
GABRA1-202ENST00000393943 ZBTB20Q9HC78 741 aaPredicted RBP8.34□□□□□ -1.07
GABRA1-202ENST00000393943 CSNK1G1Q9HCP0 422 aa8.34□□□□□ -1.07
GABRA1-202ENST00000393943 ZSCAN32Q9NX65 697 aa8.34□□□□□ -1.07
GABRA1-202ENST00000393943 NUP50Q9UKX7 468 aa8.34□□□□□ -1.07
GABRA1-202ENST00000393943 GREB1LQ9C091 1923 aaPredicted RBP8.34□□□□□ -1.07
GABRA1-202ENST00000393943 KPNA3O00505 521 aaPredicted RBP8.34□□□□□ -1.07
GABRA1-202ENST00000393943 TLL1O43897 1013 aa8.34□□□□□ -1.07
GABRA1-202ENST00000393943 UGDHO60701 494 aa8.34□□□□□ -1.07
GABRA1-202ENST00000393943 BEST1O76090 585 aa8.34□□□□□ -1.07
GABRA1-202ENST00000393943 PRLP01236 227 aa8.34□□□□□ -1.07
GABRA1-202ENST00000393943 IL1AP01583 271 aa8.34□□□□□ -1.07
GABRA1-202ENST00000393943 STSP08842 583 aa8.34□□□□□ -1.07
GABRA1-202ENST00000393943 MPC1LP0DKB6 136 aa8.34□□□□□ -1.07
GABRA1-202ENST00000393943 CHRNB1P11230 501 aa8.34□□□□□ -1.07
GABRA1-202ENST00000393943 BMP7P18075 431 aa8.34□□□□□ -1.07
GABRA1-202ENST00000393943 PTBP1P26599 531 aaKnown RBP eCLIP8.34□□□□□ -1.07
GABRA1-202ENST00000393943 RHAGQ02094 409 aa8.34□□□□□ -1.07
GABRA1-202ENST00000393943 ZNF789Q5FWF6 425 aa8.34□□□□□ -1.07
GABRA1-202ENST00000393943 ZNF697Q5TEC3 545 aa8.34□□□□□ -1.07
GABRA1-202ENST00000393943 NOXRED1Q6NXP6 359 aa8.34□□□□□ -1.07
GABRA1-202ENST00000393943 C11orf88Q6PI97 169 aa8.34□□□□□ -1.07
GABRA1-202ENST00000393943 CBLL1Q75N03 491 aa8.34□□□□□ -1.07
GABRA1-202ENST00000393943 FGD2Q7Z6J4 655 aa8.34□□□□□ -1.07
GABRA1-202ENST00000393943 DENND1CQ8IV53 801 aa8.34□□□□□ -1.07
GABRA1-202ENST00000393943 AQP11Q8NBQ7 271 aa8.34□□□□□ -1.07
GABRA1-202ENST00000393943 SCAMP5Q8TAC9 235 aa8.34□□□□□ -1.07
GABRA1-202ENST00000393943 YIPF6Q96EC8 236 aa8.34□□□□□ -1.07
GABRA1-202ENST00000393943 C11orf16Q9NQ32 467 aa8.34□□□□□ -1.07
GABRA1-202ENST00000393943 COMMD3Q9UBI1 195 aa8.34□□□□□ -1.07
GABRA1-202ENST00000393943 PRKAG2Q9UGJ0 569 aa8.34□□□□□ -1.07
GABRA1-202ENST00000393943 POU2F3Q9UKI9 436 aa8.34□□□□□ -1.07
GABRA1-202ENST00000393943 Q9Y3F1 56 aa8.34□□□□□ -1.07
GABRA1-202ENST00000393943 ZNF451Q9Y4E5 1061 aa8.34□□□□□ -1.07
GABRA1-202ENST00000393943 FAM86C2PA6NEL3 165 aa8.34□□□□□ -1.07
GABRA1-202ENST00000393943 LRRC14BA6NHZ5 514 aa8.34□□□□□ -1.07
GABRA1-202ENST00000393943 ZSCAN5BA6NJL1 495 aa8.34□□□□□ -1.07
GABRA1-202ENST00000393943 HCRTO43612 131 aa8.34□□□□□ -1.07
GABRA1-202ENST00000393943 NBNO60934 754 aa8.34□□□□□ -1.07
GABRA1-202ENST00000393943 PCGF2P35227 344 aa8.34□□□□□ -1.07
GABRA1-202ENST00000393943 GP2P55259 537 aaKnown RBP8.34□□□□□ -1.07
GABRA1-202ENST00000393943 DSTNP60981 165 aa8.34□□□□□ -1.07
GABRA1-202ENST00000393943 C2orf80Q0P641 193 aa8.34□□□□□ -1.07
GABRA1-202ENST00000393943 UGT3A2Q3SY77 523 aa8.34□□□□□ -1.07
GABRA1-202ENST00000393943 KIAA0319Q5VV43 1072 aa8.34□□□□□ -1.07
GABRA1-202ENST00000393943 PLAG1Q6DJT9 500 aa8.34□□□□□ -1.07
GABRA1-202ENST00000393943 NAT16Q8N8M0 369 aa8.34□□□□□ -1.07
GABRA1-202ENST00000393943 OR7D4Q8NG98 312 aa8.34□□□□□ -1.07
GABRA1-202ENST00000393943 TTYH2Q9BSA4 534 aa8.34□□□□□ -1.07
GABRA1-202ENST00000393943 C14orf119Q9NWQ9 140 aa8.34□□□□□ -1.07
GABRA1-202ENST00000393943 UBQLN2Q9UHD9 624 aa8.34□□□□□ -1.07
GABRA1-202ENST00000393943 PSORS1C1Q9UIG5 152 aa8.34□□□□□ -1.07
GABRA1-202ENST00000393943 PCDHGC4Q9Y5F7 938 aa8.34□□□□□ -1.07
GABRA1-202ENST00000393943 CORINQ9Y5Q5 1042 aa8.34□□□□□ -1.07
GABRA1-202ENST00000393943 ZBTB42B2RXF5 422 aa8.33□□□□□ -1.08
GABRA1-202ENST00000393943 ARVCFO00192 962 aa8.33□□□□□ -1.08
GABRA1-202ENST00000393943 UBFD1O14562 309 aaKnown RBP8.33□□□□□ -1.08
GABRA1-202ENST00000393943 RGS13O14921 159 aa8.33□□□□□ -1.08
GABRA1-202ENST00000393943 SLC28A2O43868 658 aa8.33□□□□□ -1.08
GABRA1-202ENST00000393943 HOXA11P31270 313 aaPredicted RBP8.33□□□□□ -1.08
GABRA1-202ENST00000393943 MANFP55145 182 aaKnown RBP8.33□□□□□ -1.08
GABRA1-202ENST00000393943 DSG2Q14126 1118 aa8.33□□□□□ -1.08
GABRA1-202ENST00000393943 C8orf82Q6P1X6 216 aaPredicted RBP8.33□□□□□ -1.08
GABRA1-202ENST00000393943 GPR142Q7Z601 462 aa8.33□□□□□ -1.08
GABRA1-202ENST00000393943 ADCK2Q7Z695 626 aa8.33□□□□□ -1.08
GABRA1-202ENST00000393943 GPR156Q8NFN8 814 aa8.33□□□□□ -1.08
GABRA1-202ENST00000393943 OR52B6Q8NGF0 335 aa8.33□□□□□ -1.08
GABRA1-202ENST00000393943 PIGXQ8TBF5 258 aa8.33□□□□□ -1.08
GABRA1-202ENST00000393943 SLC35A5Q9BS91 424 aa8.33□□□□□ -1.08
GABRA1-202ENST00000393943 TTYH1Q9H313 450 aaPredicted RBP8.33□□□□□ -1.08
GABRA1-202ENST00000393943 TIGARQ9NQ88 270 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms