RNA–Protein interactions for RNA: ENST00000393693.6

SNCB-202, Transcript of synuclein beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCB, Length 1,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-202ENST00000393693 TBC1D1Q86TI0 1168 aaPredicted RBP17.78■□□□□ 0.44
SNCB-202ENST00000393693 CCDC63Q8NA47 563 aa17.78■□□□□ 0.44
SNCB-202ENST00000393693 CFAP61Q8NHU2 1237 aa17.78■□□□□ 0.44
SNCB-202ENST00000393693 GRHL3Q8TE85 626 aa17.78■□□□□ 0.44
SNCB-202ENST00000393693 PPP4R1Q8TF05 950 aa17.78■□□□□ 0.44
SNCB-202ENST00000393693 LPGAT1Q92604 370 aa17.78■□□□□ 0.44
SNCB-202ENST00000393693 DLG3Q92796 817 aa17.78■□□□□ 0.44
SNCB-202ENST00000393693 MESP1Q9BRJ9 268 aa17.78■□□□□ 0.44
SNCB-202ENST00000393693 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.78■□□□□ 0.44
SNCB-202ENST00000393693 SLC17A7Q9P2U7 560 aa17.78■□□□□ 0.44
SNCB-202ENST00000393693 OSGIN2Q9Y236 505 aa17.78■□□□□ 0.44
SNCB-202ENST00000393693 GMNCA6NCL1 334 aa17.77■□□□□ 0.44
SNCB-202ENST00000393693 IQCF5A8MTL0 148 aa17.77■□□□□ 0.44
SNCB-202ENST00000393693 H3BMM5 538 aa17.77■□□□□ 0.44
SNCB-202ENST00000393693 E2F3O00716 465 aa17.77■□□□□ 0.44
SNCB-202ENST00000393693 LRRTM2O43300 516 aa17.77■□□□□ 0.44
SNCB-202ENST00000393693 VPS26AO75436 327 aa17.77■□□□□ 0.44
SNCB-202ENST00000393693 ESR1P03372 595 aa17.77■□□□□ 0.44
SNCB-202ENST00000393693 PKMP14618 531 aaKnown RBP17.77■□□□□ 0.44
SNCB-202ENST00000393693 SLC26A3P40879 764 aa17.77■□□□□ 0.44
SNCB-202ENST00000393693 OR1D4P47884 311 aa17.77■□□□□ 0.44
SNCB-202ENST00000393693 ARSFP54793 590 aa17.77■□□□□ 0.44
SNCB-202ENST00000393693 PLOD1Q02809 727 aaPredicted RBP17.77■□□□□ 0.44
SNCB-202ENST00000393693 HSPA14Q0VDF9 509 aa17.77■□□□□ 0.44
SNCB-202ENST00000393693 RBM20Q5T481 1227 aaKnown RBP17.77■□□□□ 0.44
SNCB-202ENST00000393693 UGT3A1Q6NUS8 523 aa17.77■□□□□ 0.44
SNCB-202ENST00000393693 IGFL2Q6UWQ7 119 aa17.77■□□□□ 0.44
SNCB-202ENST00000393693 TICAM1Q8IUC6 712 aa17.77■□□□□ 0.44
SNCB-202ENST00000393693 SLC22A15Q8IZD6 547 aa17.77■□□□□ 0.44
SNCB-202ENST00000393693 FKBP10Q96AY3 582 aa17.77■□□□□ 0.44
SNCB-202ENST00000393693 CNDP1Q96KN2 507 aa17.77■□□□□ 0.44
SNCB-202ENST00000393693 NDNQ99608 321 aa17.77■□□□□ 0.44
SNCB-202ENST00000393693 CUTCQ9NTM9 273 aa17.77■□□□□ 0.44
SNCB-202ENST00000393693 TAS2R13Q9NYV9 303 aa17.77■□□□□ 0.44
SNCB-202ENST00000393693 CTSFQ9UBX1 484 aa17.77■□□□□ 0.44
SNCB-202ENST00000393693 SNRNP200O75643 2136 aaKnown RBP17.77■□□□□ 0.43
SNCB-202ENST00000393693 CROCCQ5TZA2 2017 aa17.76■□□□□ 0.43
SNCB-202ENST00000393693 F8W8V4 182 aa17.76■□□□□ 0.43
SNCB-202ENST00000393693 PRMT5O14744 637 aaPredicted RBP17.76■□□□□ 0.43
SNCB-202ENST00000393693 DSCR3O14972 297 aa17.76■□□□□ 0.43
SNCB-202ENST00000393693 PHGDHO43175 533 aaKnown RBP17.76■□□□□ 0.43
SNCB-202ENST00000393693 KDM1AO60341 852 aa17.76■□□□□ 0.43
SNCB-202ENST00000393693 ONECUT2O95948 504 aa17.76■□□□□ 0.43
SNCB-202ENST00000393693 ALBP02768 609 aa17.76■□□□□ 0.43
SNCB-202ENST00000393693 CD9P21926 228 aa17.76■□□□□ 0.43
SNCB-202ENST00000393693 FDXRP22570 491 aa17.76■□□□□ 0.43
SNCB-202ENST00000393693 RPS3P23396 243 aaKnown RBP eCLIP17.76■□□□□ 0.43
SNCB-202ENST00000393693 FMO4P31512 558 aa17.76■□□□□ 0.43
SNCB-202ENST00000393693 ETV4P43268 484 aa17.76■□□□□ 0.43
SNCB-202ENST00000393693 Q0VFX4 171 aa17.76■□□□□ 0.43
SNCB-202ENST00000393693 FAM83EQ2M2I3 478 aa17.76■□□□□ 0.43
SNCB-202ENST00000393693 AGAP7PQ5VUJ5 663 aa17.76■□□□□ 0.43
SNCB-202ENST00000393693 KLC3Q6P597 504 aa17.76■□□□□ 0.43
SNCB-202ENST00000393693 FIGLAQ6QHK4 219 aa17.76■□□□□ 0.43
SNCB-202ENST00000393693 ARMC2Q8NEN0 867 aa17.76■□□□□ 0.43
SNCB-202ENST00000393693 LRRC8CQ8TDW0 803 aa17.76■□□□□ 0.43
SNCB-202ENST00000393693 SREK1Q8WXA9 508 aaKnown RBP17.76■□□□□ 0.43
SNCB-202ENST00000393693 NACC2Q96BF6 587 aa17.76■□□□□ 0.43
SNCB-202ENST00000393693 CHMP6Q96FZ7 201 aa17.76■□□□□ 0.43
SNCB-202ENST00000393693 AGAP4Q96P64 663 aa17.76■□□□□ 0.43
SNCB-202ENST00000393693 NSRP1Q9H0G5 558 aaKnown RBP17.76■□□□□ 0.43
SNCB-202ENST00000393693 WDR54Q9H977 334 aa17.76■□□□□ 0.43
SNCB-202ENST00000393693 GPAMQ9HCL2 828 aa17.76■□□□□ 0.43
SNCB-202ENST00000393693 MAU2Q9Y6X3 613 aa17.76■□□□□ 0.43
SNCB-202ENST00000393693 MDC1Q14676 2089 aaKnown RBP17.76■□□□□ 0.43
SNCB-202ENST00000393693 LRBAP50851 2863 aa17.76■□□□□ 0.43
SNCB-202ENST00000393693 BIRC5O15392 142 aa17.75■□□□□ 0.43
SNCB-202ENST00000393693 PLIN3O60664 434 aa17.75■□□□□ 0.43
SNCB-202ENST00000393693 KLHL2O95198 593 aa17.75■□□□□ 0.43
SNCB-202ENST00000393693 MED26O95402 600 aa17.75■□□□□ 0.43
SNCB-202ENST00000393693 DHRS4L1P0CG22 281 aa17.75■□□□□ 0.43
SNCB-202ENST00000393693 SLC35E2BP0CK96 405 aa17.75■□□□□ 0.43
SNCB-202ENST00000393693 PIM1P11309 404 aaPredicted RBP17.75■□□□□ 0.43
SNCB-202ENST00000393693 SKIV2L2P42285 1042 aaKnown RBP17.75■□□□□ 0.43
SNCB-202ENST00000393693 TSFMP43897 325 aaKnown RBP17.75■□□□□ 0.43
SNCB-202ENST00000393693 SERPINB4P48594 390 aa17.75■□□□□ 0.43
SNCB-202ENST00000393693 CDC16Q13042 620 aa17.75■□□□□ 0.43
SNCB-202ENST00000393693 PDAP1Q13442 181 aaKnown RBP17.75■□□□□ 0.43
SNCB-202ENST00000393693 ZNF169Q14929 603 aaPredicted RBP17.75■□□□□ 0.43
SNCB-202ENST00000393693 SF1Q15637 639 aaKnown RBP17.75■□□□□ 0.43
SNCB-202ENST00000393693 PDK4Q16654 411 aa17.75■□□□□ 0.43
SNCB-202ENST00000393693 LINC00696Q6ZRV3 163 aa17.75■□□□□ 0.43
SNCB-202ENST00000393693 CEP97Q8IW35 865 aa17.75■□□□□ 0.43
SNCB-202ENST00000393693 CATSPER1Q8NEC5 780 aa17.75■□□□□ 0.43
SNCB-202ENST00000393693 THOC3Q96J01 351 aaKnown RBP17.75■□□□□ 0.43
SNCB-202ENST00000393693 SLC26A1Q9H2B4 701 aa17.75■□□□□ 0.43
SNCB-202ENST00000393693 GNPTGQ9UJJ9 305 aa17.75■□□□□ 0.43
SNCB-202ENST00000393693 RUVBL2Q9Y230 463 aaKnown RBP17.75■□□□□ 0.43
SNCB-202ENST00000393693 ANKRD12Q6UB98 2062 aa17.75■□□□□ 0.43
SNCB-202ENST00000393693 CSMD1Q96PZ7 3565 aa17.74■□□□□ 0.43
SNCB-202ENST00000393693 E5RI56 91 aa17.74■□□□□ 0.43
SNCB-202ENST00000393693 GPC4O75487 556 aa17.74■□□□□ 0.43
SNCB-202ENST00000393693 KLHL18O94889 574 aa17.74■□□□□ 0.43
SNCB-202ENST00000393693 VIMP08670 466 aaKnown RBP17.74■□□□□ 0.43
SNCB-202ENST00000393693 GRM7Q14831 915 aa17.74■□□□□ 0.43
SNCB-202ENST00000393693 RBBP7Q16576 425 aa17.74■□□□□ 0.43
SNCB-202ENST00000393693 IRAK1BP1Q5VVH5 260 aa17.74■□□□□ 0.43
SNCB-202ENST00000393693 PTRHD1Q6GMV3 140 aaKnown RBP17.74■□□□□ 0.43
SNCB-202ENST00000393693 ZNF549Q6P9A3 640 aa17.74■□□□□ 0.43
SNCB-202ENST00000393693 RGS9BPQ6ZS82 235 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms