RNA–Protein interactions for RNA: ENST00000393278.6

MBD4-202, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 1 (best) BASIC

Gene MBD4, Length 1,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-202ENST00000393278 DPH7Q9BTV6 452 aa16.77■□□□□ 0.28
MBD4-202ENST00000393278 EML5Q05BV3 1969 aa16.77■□□□□ 0.27
MBD4-202ENST00000393278 ARHGEF17Q96PE2 2063 aaPredicted RBP16.76■□□□□ 0.27
MBD4-202ENST00000393278 AKAP10O43572 662 aa16.76■□□□□ 0.27
MBD4-202ENST00000393278 LCMT2O60294 686 aaKnown RBP16.76■□□□□ 0.27
MBD4-202ENST00000393278 KCNH1O95259 989 aa16.76■□□□□ 0.27
MBD4-202ENST00000393278 HOXA6P31267 233 aa16.76■□□□□ 0.27
MBD4-202ENST00000393278 ERFP50548 548 aa16.76■□□□□ 0.27
MBD4-202ENST00000393278 ZNF763Q0D2J5 394 aa16.76■□□□□ 0.27
MBD4-202ENST00000393278 FLOT2Q14254 428 aa16.76■□□□□ 0.27
MBD4-202ENST00000393278 TRIM25Q14258 630 aaKnown RBP16.76■□□□□ 0.27
MBD4-202ENST00000393278 KIR2DS3Q14952 304 aa16.76■□□□□ 0.27
MBD4-202ENST00000393278 RCN1Q15293 331 aa16.76■□□□□ 0.27
MBD4-202ENST00000393278 UGT8Q16880 541 aa16.76■□□□□ 0.27
MBD4-202ENST00000393278 SPATS1Q496A3 300 aa16.76■□□□□ 0.27
MBD4-202ENST00000393278 KHDRBS2Q5VWX1 349 aaKnown RBP16.76■□□□□ 0.27
MBD4-202ENST00000393278 KIAA1614Q5VZ46 1190 aa16.76■□□□□ 0.27
MBD4-202ENST00000393278 ZNF425Q6IV72 752 aa16.76■□□□□ 0.27
MBD4-202ENST00000393278 NANOGP8Q6NSW7 305 aa16.76■□□□□ 0.27
MBD4-202ENST00000393278 MSANTD1Q6ZTZ1 278 aa16.76■□□□□ 0.27
MBD4-202ENST00000393278 SLC9B2Q86UD5 537 aa16.76■□□□□ 0.27
MBD4-202ENST00000393278 PLD3Q8IV08 490 aa16.76■□□□□ 0.27
MBD4-202ENST00000393278 DNAJB14Q8TBM8 379 aa16.76■□□□□ 0.27
MBD4-202ENST00000393278 CGREF1Q99674 301 aa16.76■□□□□ 0.27
MBD4-202ENST00000393278 SARGQ9BW04 601 aa16.76■□□□□ 0.27
MBD4-202ENST00000393278 DUSP15Q9H1R2 295 aaPredicted RBP16.76■□□□□ 0.27
MBD4-202ENST00000393278 NANOGQ9H9S0 305 aa16.76■□□□□ 0.27
MBD4-202ENST00000393278 MAPRE3Q9UPY8 281 aa16.76■□□□□ 0.27
MBD4-202ENST00000393278 GNG14A0A1W2PPG7 69 aa16.75■□□□□ 0.27
MBD4-202ENST00000393278 FAM221BA6H8Z2 402 aa16.75■□□□□ 0.27
MBD4-202ENST00000393278 FKBP6O75344 327 aa16.75■□□□□ 0.27
MBD4-202ENST00000393278 CLEC3AO75596 197 aa16.75■□□□□ 0.27
MBD4-202ENST00000393278 BCAS2O75934 225 aaPredicted RBP16.75■□□□□ 0.27
MBD4-202ENST00000393278 PDGFBP01127 241 aaPredicted RBP16.75■□□□□ 0.27
MBD4-202ENST00000393278 HSD17B1P14061 328 aa16.75■□□□□ 0.27
MBD4-202ENST00000393278 GRK3P35626 688 aa16.75■□□□□ 0.27
MBD4-202ENST00000393278 NXPH1P58417 271 aa16.75■□□□□ 0.27
MBD4-202ENST00000393278 SRSF11Q05519 484 aaKnown RBP16.75■□□□□ 0.27
MBD4-202ENST00000393278 ELOCQ15369 112 aa16.75■□□□□ 0.27
MBD4-202ENST00000393278 CCDC6Q16204 474 aa16.75■□□□□ 0.27
MBD4-202ENST00000393278 HKDC1Q2TB90 917 aa16.75■□□□□ 0.27
MBD4-202ENST00000393278 PGS1Q32NB8 556 aa16.75■□□□□ 0.27
MBD4-202ENST00000393278 AAGABQ6PD74 315 aa16.75■□□□□ 0.27
MBD4-202ENST00000393278 SFTPA2Q8IWL1 248 aa16.75■□□□□ 0.27
MBD4-202ENST00000393278 FAM46DQ8NEK8 389 aa16.75■□□□□ 0.27
MBD4-202ENST00000393278 DNAJB8Q8NHS0 232 aa16.75■□□□□ 0.27
MBD4-202ENST00000393278 CDC26Q8NHZ8 85 aa16.75■□□□□ 0.27
MBD4-202ENST00000393278 WDR48Q8TAF3 677 aa16.75■□□□□ 0.27
MBD4-202ENST00000393278 FLVCR1-AS1Q8TAF5 88 aa16.75■□□□□ 0.27
MBD4-202ENST00000393278 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.75■□□□□ 0.277e-9■■■□□ 18.8
MBD4-202ENST00000393278 ZDHHC1Q8WTX9 485 aa16.75■□□□□ 0.27
MBD4-202ENST00000393278 AHSPQ9NZD4 102 aa16.75■□□□□ 0.27
MBD4-202ENST00000393278 BCAP29Q9UHQ4 241 aa16.75■□□□□ 0.27
MBD4-202ENST00000393278 MCM8Q9UJA3 840 aa16.75■□□□□ 0.27
MBD4-202ENST00000393278 SNX7Q9UNH6 387 aa16.75■□□□□ 0.27
MBD4-202ENST00000393278 MAN2B2Q9Y2E5 1009 aa16.75■□□□□ 0.27
MBD4-202ENST00000393278 L3MBTL1Q9Y468 752 aa16.75■□□□□ 0.27
MBD4-202ENST00000393278 NEUROG3Q9Y4Z2 214 aa16.75■□□□□ 0.27
MBD4-202ENST00000393278 HEATR5BQ9P2D3 2071 aa16.75■□□□□ 0.27
MBD4-202ENST00000393278 CCDC163A0A0D9SF12 145 aa16.75■□□□□ 0.27
MBD4-202ENST00000393278 HAT1O14929 419 aa16.75■□□□□ 0.27
MBD4-202ENST00000393278 SCAMP2O15127 329 aaKnown RBP16.75■□□□□ 0.27
MBD4-202ENST00000393278 GSTM2P28161 218 aa16.75■□□□□ 0.27
MBD4-202ENST00000393278 BCL6P41182 706 aa16.75■□□□□ 0.27
MBD4-202ENST00000393278 KIR3DL1P43629 444 aa16.75■□□□□ 0.27
MBD4-202ENST00000393278 SIGLEC14Q08ET2 396 aa16.75■□□□□ 0.27
MBD4-202ENST00000393278 TRAP1Q12931 704 aaKnown RBP16.75■□□□□ 0.27
MBD4-202ENST00000393278 RABL3Q5HYI8 236 aa16.75■□□□□ 0.27
MBD4-202ENST00000393278 C6orf10Q5SRN2 563 aa16.75■□□□□ 0.27
MBD4-202ENST00000393278 GPR180Q86V85 440 aa16.75■□□□□ 0.27
MBD4-202ENST00000393278 HIPK4Q8NE63 616 aa16.75■□□□□ 0.27
MBD4-202ENST00000393278 OR7A2PQ8NGA2 310 aa16.75■□□□□ 0.27
MBD4-202ENST00000393278 CREB3L4Q8TEY5 395 aa16.75■□□□□ 0.27
MBD4-202ENST00000393278 PPM1MQ96MI6 270 aa16.75■□□□□ 0.27
MBD4-202ENST00000393278 RMND5AQ9H871 391 aa16.75■□□□□ 0.27
MBD4-202ENST00000393278 SERHLQ9NQF3 203 aa16.75■□□□□ 0.27
MBD4-202ENST00000393278 OR6C74A6NCV1 312 aa16.74■□□□□ 0.27
MBD4-202ENST00000393278 PLPP1O14494 284 aa16.74■□□□□ 0.27
MBD4-202ENST00000393278 KLHL18O94889 574 aa16.74■□□□□ 0.27
MBD4-202ENST00000393278 KLK1P06870 262 aa16.74■□□□□ 0.27
MBD4-202ENST00000393278 COX7A2P14406 83 aa16.74■□□□□ 0.27
MBD4-202ENST00000393278 EEFSECP57772 596 aaKnown RBP16.74■□□□□ 0.27
MBD4-202ENST00000393278 PLIN5Q00G26 463 aa16.74■□□□□ 0.27
MBD4-202ENST00000393278 OR4F3Q6IEY1 312 aa16.74■□□□□ 0.27
MBD4-202ENST00000393278 CAMKMTQ7Z624 323 aa16.74■□□□□ 0.27
MBD4-202ENST00000393278 PAQR7Q86WK9 346 aa16.74■□□□□ 0.27
MBD4-202ENST00000393278 RBM12BQ8IXT5 1001 aaKnown RBP16.74■□□□□ 0.27
MBD4-202ENST00000393278 TBC1D19Q8N5T2 526 aa16.74■□□□□ 0.27
MBD4-202ENST00000393278 OR8J3Q8NGG0 315 aa16.74■□□□□ 0.27
MBD4-202ENST00000393278 OR8J2Q8NGG1 315 aa16.74■□□□□ 0.27
MBD4-202ENST00000393278 SLC26A7Q8TE54 656 aa16.74■□□□□ 0.27
MBD4-202ENST00000393278 ITCHQ96J02 903 aa16.74■□□□□ 0.27
MBD4-202ENST00000393278 OR2A14Q96R47 310 aa16.74■□□□□ 0.27
MBD4-202ENST00000393278 F2RL3Q96RI0 385 aa16.74■□□□□ 0.27
MBD4-202ENST00000393278 ZNF717Q9BY31 904 aaPredicted RBP16.74■□□□□ 0.27
MBD4-202ENST00000393278 TRIM8Q9BZR9 551 aa16.74■□□□□ 0.27
MBD4-202ENST00000393278 REXO4Q9GZR2 422 aaKnown RBP16.74■□□□□ 0.27
MBD4-202ENST00000393278 PCDHAC1Q9H158 963 aa16.74■□□□□ 0.27
MBD4-202ENST00000393278 KCNH6Q9H252 994 aa16.74■□□□□ 0.27
MBD4-202ENST00000393278 S100A14Q9HCY8 104 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms