RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 PAPOLGQ9BWT3 736 aaKnown RBP7.4□□□□□ -1.22
VTI1A-201ENST00000393077 OR51J1Q9H342 316 aa7.4□□□□□ -1.22
VTI1A-201ENST00000393077 ALG9Q9H6U8 611 aa7.4□□□□□ -1.22
VTI1A-201ENST00000393077 NT5DC2Q9H857 520 aa7.4□□□□□ -1.22
VTI1A-201ENST00000393077 SIPA1L3O60292 1781 aaPredicted RBP7.4□□□□□ -1.22
VTI1A-201ENST00000393077 IGLV3-22A0A075B6J6 115 aa7.4□□□□□ -1.22
VTI1A-201ENST00000393077 A0A096LPI6 279 aa7.4□□□□□ -1.22
VTI1A-201ENST00000393077 A0A1W2PP18 115 aa7.4□□□□□ -1.22
VTI1A-201ENST00000393077 CXCL11O14625 94 aa7.4□□□□□ -1.22
VTI1A-201ENST00000393077 ZNF195O14628 629 aa7.4□□□□□ -1.22
VTI1A-201ENST00000393077 SDC3O75056 442 aa7.4□□□□□ -1.22
VTI1A-201ENST00000393077 SNAPC5O75971 98 aa7.4□□□□□ -1.22
VTI1A-201ENST00000393077 ADH1CP00326 375 aa7.4□□□□□ -1.22
VTI1A-201ENST00000393077 PRKCGP05129 697 aa7.4□□□□□ -1.22
VTI1A-201ENST00000393077 F7P08709 466 aaPredicted RBP7.4□□□□□ -1.22
VTI1A-201ENST00000393077 NFKB1P19838 968 aa7.4□□□□□ -1.22
VTI1A-201ENST00000393077 C21orf33P30042 268 aaPredicted RBP7.4□□□□□ -1.22
VTI1A-201ENST00000393077 ACSL1P33121 698 aa7.4□□□□□ -1.22
VTI1A-201ENST00000393077 RAB4BP61018 213 aa7.4□□□□□ -1.22
VTI1A-201ENST00000393077 PON3Q15166 354 aa7.4□□□□□ -1.22
VTI1A-201ENST00000393077 SURF1Q15526 300 aa7.4□□□□□ -1.22
VTI1A-201ENST00000393077 CTU2Q2VPK5 515 aaKnown RBP7.4□□□□□ -1.22
VTI1A-201ENST00000393077 KLHL22Q53GT1 634 aa7.4□□□□□ -1.22
VTI1A-201ENST00000393077 CASP12Q6UXS9 341 aa7.4□□□□□ -1.22
VTI1A-201ENST00000393077 DNAJB7Q7Z6W7 309 aaPredicted RBP7.4□□□□□ -1.22
VTI1A-201ENST00000393077 GPAT4Q86UL3 456 aa7.4□□□□□ -1.22
VTI1A-201ENST00000393077 MTMR14Q8NCE2 650 aa7.4□□□□□ -1.22
VTI1A-201ENST00000393077 TWIST2Q8WVJ9 160 aa7.4□□□□□ -1.22
VTI1A-201ENST00000393077 PIH1D2Q8WWB5 315 aa7.4□□□□□ -1.22
VTI1A-201ENST00000393077 MAFIPQ8WZ33 124 aa7.4□□□□□ -1.22
VTI1A-201ENST00000393077 POP5Q969H6 163 aaKnown RBP7.4□□□□□ -1.22
VTI1A-201ENST00000393077 PABPC5Q96DU9 382 aaKnown RBP7.4□□□□□ -1.22
VTI1A-201ENST00000393077 HTATIP2Q9BUP3 242 aa7.4□□□□□ -1.22
VTI1A-201ENST00000393077 RRAGCQ9HB90 399 aa7.4□□□□□ -1.22
VTI1A-201ENST00000393077 GPN1Q9HCN4 374 aaPredicted RBP7.4□□□□□ -1.22
VTI1A-201ENST00000393077 NUDT15Q9NV35 164 aa7.4□□□□□ -1.22
VTI1A-201ENST00000393077 CTSFQ9UBX1 484 aa7.4□□□□□ -1.22
VTI1A-201ENST00000393077 MUTYHQ9UIF7 546 aa7.4□□□□□ -1.22
VTI1A-201ENST00000393077 CNTN6Q9UQ52 1028 aa7.4□□□□□ -1.22
VTI1A-201ENST00000393077 CICQ96RK0 1608 aaPredicted RBP7.4□□□□□ -1.22
VTI1A-201ENST00000393077 CCDC88AQ3V6T2 1871 aa7.4□□□□□ -1.23
VTI1A-201ENST00000393077 ALDOBP05062 364 aa7.4□□□□□ -1.23
VTI1A-201ENST00000393077 URODP06132 367 aa7.4□□□□□ -1.23
VTI1A-201ENST00000393077 CTSHP09668 335 aa7.4□□□□□ -1.23
VTI1A-201ENST00000393077 LTA4HP09960 611 aaKnown RBP7.4□□□□□ -1.23
VTI1A-201ENST00000393077 HTR1EP28566 365 aa7.4□□□□□ -1.23
VTI1A-201ENST00000393077 PIGAP37287 484 aa7.4□□□□□ -1.23
VTI1A-201ENST00000393077 RGS6P49758 472 aa7.4□□□□□ -1.23
VTI1A-201ENST00000393077 OR4D2P58180 307 aa7.4□□□□□ -1.23
VTI1A-201ENST00000393077 ZNF280AP59817 542 aaPredicted RBP7.4□□□□□ -1.23
VTI1A-201ENST00000393077 NRG1Q02297 640 aaPredicted RBP7.4□□□□□ -1.23
VTI1A-201ENST00000393077 ALKBH1Q13686 389 aaKnown RBP7.4□□□□□ -1.23
VTI1A-201ENST00000393077 KCNC3Q14003 757 aa7.4□□□□□ -1.23
VTI1A-201ENST00000393077 RAB33AQ14088 237 aa7.4□□□□□ -1.23
VTI1A-201ENST00000393077 EXOC3L2Q2M3D2 409 aa7.4□□□□□ -1.23
VTI1A-201ENST00000393077 SOWAHCQ53LP3 525 aaPredicted RBP7.4□□□□□ -1.23
VTI1A-201ENST00000393077 PKN3Q6P5Z2 889 aa7.4□□□□□ -1.23
VTI1A-201ENST00000393077 ZNF549Q6P9A3 640 aa7.4□□□□□ -1.23
VTI1A-201ENST00000393077 ZNF852Q6ZMS4 543 aa7.4□□□□□ -1.23
VTI1A-201ENST00000393077 FAM183BPQ6ZVS7 135 aa7.4□□□□□ -1.23
VTI1A-201ENST00000393077 PGAP1Q75T13 922 aa7.4□□□□□ -1.23
VTI1A-201ENST00000393077 LAPTM4BQ86VI4 370 aa7.4□□□□□ -1.23
VTI1A-201ENST00000393077 NT5DC4Q86YG4 428 aa7.4□□□□□ -1.23
VTI1A-201ENST00000393077 JOSD2Q8TAC2 188 aa7.4□□□□□ -1.23
VTI1A-201ENST00000393077 ULK4Q96C45 1275 aa7.4□□□□□ -1.23
VTI1A-201ENST00000393077 PGAP3Q96FM1 320 aaPredicted RBP7.4□□□□□ -1.23
VTI1A-201ENST00000393077 LRCH3Q96II8 777 aa7.4□□□□□ -1.23
VTI1A-201ENST00000393077 ZBTB45Q96K62 511 aaPredicted RBP7.4□□□□□ -1.23
VTI1A-201ENST00000393077 DPY30Q9C005 99 aa7.4□□□□□ -1.23
VTI1A-201ENST00000393077 SRRDQ9UH36 339 aa7.4□□□□□ -1.23
VTI1A-201ENST00000393077 ZFR2Q9UPR6 939 aaKnown RBP7.4□□□□□ -1.23
VTI1A-201ENST00000393077 PADI2Q9Y2J8 665 aa7.4□□□□□ -1.23
VTI1A-201ENST00000393077 A0A0A6YYJ9 748 aa7.39□□□□□ -1.23
VTI1A-201ENST00000393077 LCHNA4D1U4 455 aa7.39□□□□□ -1.23
VTI1A-201ENST00000393077 ERI2A8K979 691 aaKnown RBP7.39□□□□□ -1.23
VTI1A-201ENST00000393077 G3V2L1 256 aa7.39□□□□□ -1.23
VTI1A-201ENST00000393077 SIX6O95475 246 aa7.39□□□□□ -1.23
VTI1A-201ENST00000393077 ZNF35P13682 527 aa7.39□□□□□ -1.23
VTI1A-201ENST00000393077 PTAFRP25105 342 aa7.39□□□□□ -1.23
VTI1A-201ENST00000393077 HTR2AP28223 471 aa7.39□□□□□ -1.23
VTI1A-201ENST00000393077 OAZ1P54368 228 aa7.39□□□□□ -1.23
VTI1A-201ENST00000393077 CRYZQ08257 329 aaKnown RBP7.39□□□□□ -1.23
VTI1A-201ENST00000393077 CBLBQ13191 982 aa7.39□□□□□ -1.23
VTI1A-201ENST00000393077 BIKQ13323 160 aa7.39□□□□□ -1.23
VTI1A-201ENST00000393077 RIN1Q13671 783 aa7.39□□□□□ -1.23
VTI1A-201ENST00000393077 PMF1Q6P1K2 205 aa7.39□□□□□ -1.23
VTI1A-201ENST00000393077 BLOC1S3Q6QNY0 202 aa7.39□□□□□ -1.23
VTI1A-201ENST00000393077 METTL7BQ6UX53 244 aa7.39□□□□□ -1.23
VTI1A-201ENST00000393077 ZNF574Q6ZN55 896 aaPredicted RBP7.39□□□□□ -1.23
VTI1A-201ENST00000393077 NUDT18Q6ZVK8 323 aa7.39□□□□□ -1.23
VTI1A-201ENST00000393077 ILDR2Q71H61 639 aa7.39□□□□□ -1.23
VTI1A-201ENST00000393077 TSPYL5Q86VY4 417 aaPredicted RBP7.39□□□□□ -1.23
VTI1A-201ENST00000393077 SPATA2LQ8IUW3 424 aaPredicted RBP7.39□□□□□ -1.23
VTI1A-201ENST00000393077 CCDC71Q8IV32 467 aaPredicted RBP7.39□□□□□ -1.23
VTI1A-201ENST00000393077 MS4A15Q8N5U1 240 aa7.39□□□□□ -1.23
VTI1A-201ENST00000393077 IL17RCQ8NAC3 791 aa7.39□□□□□ -1.23
VTI1A-201ENST00000393077 DNERQ8NFT8 737 aa7.39□□□□□ -1.23
VTI1A-201ENST00000393077 LMO3Q8TAP4 145 aa7.39□□□□□ -1.23
VTI1A-201ENST00000393077 PIGKQ92643 395 aa7.39□□□□□ -1.23
VTI1A-201ENST00000393077 SFXN2Q96NB2 322 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms