RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 RDH11Q8TC12 318 aa18.35■□□□□ 0.53
CCDC50-202ENST00000392456 PHF10Q8WUB8 498 aaKnown RBP18.35■□□□□ 0.53
CCDC50-202ENST00000392456 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.35■□□□□ 0.53
CCDC50-202ENST00000392456 RNF112Q9ULX5 631 aa18.35■□□□□ 0.53
CCDC50-202ENST00000392456 ZNF98A6NK75 572 aa18.34■□□□□ 0.53
CCDC50-202ENST00000392456 A8MT66 165 aa18.34■□□□□ 0.53
CCDC50-202ENST00000392456 MMP20O60882 483 aa18.34■□□□□ 0.53
CCDC50-202ENST00000392456 SLC25A14O95258 325 aaPredicted RBP18.34■□□□□ 0.53
CCDC50-202ENST00000392456 BMP2P12643 396 aa18.34■□□□□ 0.53
CCDC50-202ENST00000392456 MTHFD2P13995 350 aa18.34■□□□□ 0.53
CCDC50-202ENST00000392456 HNRNPLP14866 589 aaKnown RBP eCLIP18.34■□□□□ 0.531e-12■■■■■ 37.3
CCDC50-202ENST00000392456 TRIM23P36406 574 aa18.34■□□□□ 0.53
CCDC50-202ENST00000392456 P2RY2P41231 377 aa18.34■□□□□ 0.53
CCDC50-202ENST00000392456 OR2B6P58173 313 aa18.34■□□□□ 0.53
CCDC50-202ENST00000392456 CNTN1Q12860 1018 aa18.34■□□□□ 0.53
CCDC50-202ENST00000392456 ACOX1Q15067 660 aa18.34■□□□□ 0.53
CCDC50-202ENST00000392456 SKIV2LQ15477 1246 aaKnown RBP18.34■□□□□ 0.53
CCDC50-202ENST00000392456 TSNQ15631 228 aaKnown RBP18.34■□□□□ 0.53
CCDC50-202ENST00000392456 GPRC6AQ5T6X5 926 aa18.34■□□□□ 0.53
CCDC50-202ENST00000392456 HENMT1Q5T8I9 393 aaKnown RBP18.34■□□□□ 0.53
CCDC50-202ENST00000392456 DUS3LQ96G46 650 aaKnown RBP18.34■□□□□ 0.53
CCDC50-202ENST00000392456 SLC6A17Q9H1V8 727 aa18.34■□□□□ 0.53
CCDC50-202ENST00000392456 SERGEFQ9UGK8 458 aa18.34■□□□□ 0.53
CCDC50-202ENST00000392456 TRMT6Q9UJA5 497 aaKnown RBP18.34■□□□□ 0.53
CCDC50-202ENST00000392456 CNOT6Q9ULM6 557 aaKnown RBP18.34■□□□□ 0.53
CCDC50-202ENST00000392456 TMEM265A0A087WTH1 108 aa18.34■□□□□ 0.53
CCDC50-202ENST00000392456 LRRC72A6NJI9 287 aa18.34■□□□□ 0.53
CCDC50-202ENST00000392456 MBTPS2O43462 519 aa18.34■□□□□ 0.53
CCDC50-202ENST00000392456 NARSO43776 548 aaKnown RBP18.34■□□□□ 0.53
CCDC50-202ENST00000392456 IFI30P13284 250 aa18.34■□□□□ 0.53
CCDC50-202ENST00000392456 SLC7A1P30825 629 aa18.34■□□□□ 0.53
CCDC50-202ENST00000392456 DRD3P35462 400 aa18.34■□□□□ 0.53
CCDC50-202ENST00000392456 HSD17B2P37059 387 aa18.34■□□□□ 0.53
CCDC50-202ENST00000392456 CCNYL2Q5T2Q4 361 aa18.34■□□□□ 0.53
CCDC50-202ENST00000392456 ZNF781Q8N8C0 355 aa18.34■□□□□ 0.53
CCDC50-202ENST00000392456 GAS2L1Q99501 681 aaPredicted RBP18.34■□□□□ 0.53
CCDC50-202ENST00000392456 UBE2ZQ9H832 354 aaPredicted RBP18.34■□□□□ 0.53
CCDC50-202ENST00000392456 ZDHHC3Q9NYG2 299 aa18.34■□□□□ 0.53
CCDC50-202ENST00000392456 LRRC14BA6NHZ5 514 aa18.33■□□□□ 0.53
CCDC50-202ENST00000392456 A8MV72 311 aaPredicted RBP18.33■□□□□ 0.53
CCDC50-202ENST00000392456 K7ESM1 405 aa18.33■□□□□ 0.53
CCDC50-202ENST00000392456 UBXN8O00124 270 aa18.33■□□□□ 0.53
CCDC50-202ENST00000392456 MID1O15344 667 aa18.33■□□□□ 0.53
CCDC50-202ENST00000392456 RBP1P09455 135 aa18.33■□□□□ 0.53
CCDC50-202ENST00000392456 HTR1BP28222 390 aa18.33■□□□□ 0.53
CCDC50-202ENST00000392456 DGUOKQ16854 277 aa18.33■□□□□ 0.53
CCDC50-202ENST00000392456 ARL13AQ5H913 290 aaPredicted RBP18.33■□□□□ 0.53
CCDC50-202ENST00000392456 INTS11Q5TA45 600 aaKnown RBP18.33■□□□□ 0.53
CCDC50-202ENST00000392456 BROXQ5VW32 411 aa18.33■□□□□ 0.53
CCDC50-202ENST00000392456 GDPD3Q7L5L3 318 aa18.33■□□□□ 0.53
CCDC50-202ENST00000392456 OFCC1Q8IZS5 231 aa18.33■□□□□ 0.53
CCDC50-202ENST00000392456 FBXW5Q969U6 566 aa18.33■□□□□ 0.53
CCDC50-202ENST00000392456 LINGO1Q96FE5 620 aa18.33■□□□□ 0.53
CCDC50-202ENST00000392456 MARK4Q96L34 752 aa18.33■□□□□ 0.53
CCDC50-202ENST00000392456 ZNF578Q96N58 590 aaPredicted RBP18.33■□□□□ 0.53
CCDC50-202ENST00000392456 ATOH8Q96SQ7 321 aa18.33■□□□□ 0.53
CCDC50-202ENST00000392456 COPS8Q99627 209 aa18.33■□□□□ 0.53
CCDC50-202ENST00000392456 DHRS7Q9Y394 339 aa18.33■□□□□ 0.53
CCDC50-202ENST00000392456 PIAS3Q9Y6X2 628 aa18.33■□□□□ 0.53
CCDC50-202ENST00000392456 LRRK1Q38SD2 2015 aa18.33■□□□□ 0.53
CCDC50-202ENST00000392456 NPEPPSL1A6NEC2 478 aa18.33■□□□□ 0.52
CCDC50-202ENST00000392456 STX16-NPEPL1H3BU86 382 aa18.33■□□□□ 0.52
CCDC50-202ENST00000392456 PRKD3O94806 890 aa18.33■□□□□ 0.52
CCDC50-202ENST00000392456 IFNA14P01570 189 aa18.33■□□□□ 0.52
CCDC50-202ENST00000392456 CD72P21854 359 aa18.33■□□□□ 0.52
CCDC50-202ENST00000392456 RPS3P23396 243 aaKnown RBP eCLIP18.33■□□□□ 0.52
CCDC50-202ENST00000392456 ATP5F1P24539 256 aaPredicted RBP18.33■□□□□ 0.52
CCDC50-202ENST00000392456 SERPINB10P48595 397 aa18.33■□□□□ 0.52
CCDC50-202ENST00000392456 ERN2Q76MJ5 926 aaKnown RBP18.33■□□□□ 0.52
CCDC50-202ENST00000392456 PM20D2Q8IYS1 436 aa18.33■□□□□ 0.52
CCDC50-202ENST00000392456 CBR4Q8N4T8 237 aa18.33■□□□□ 0.52
CCDC50-202ENST00000392456 VANGL1Q8TAA9 524 aaPredicted RBP18.33■□□□□ 0.52
CCDC50-202ENST00000392456 ASB9Q96DX5 294 aa18.33■□□□□ 0.52
CCDC50-202ENST00000392456 DERL2Q9GZP9 239 aa18.33■□□□□ 0.52
CCDC50-202ENST00000392456 SIRT5Q9NXA8 310 aa18.33■□□□□ 0.52
CCDC50-202ENST00000392456 PCDHB1Q9Y5F3 818 aa18.33■□□□□ 0.52
CCDC50-202ENST00000392456 DOCK9Q9BZ29 2069 aa18.32■□□□□ 0.52
CCDC50-202ENST00000392456 SAGE2PA6NJ88 616 aa18.32■□□□□ 0.52
CCDC50-202ENST00000392456 E7ENX8 843 aa18.32■□□□□ 0.52
CCDC50-202ENST00000392456 TBX1O43435 398 aa18.32■□□□□ 0.52
CCDC50-202ENST00000392456 UGT2B10P36537 528 aa18.32■□□□□ 0.52
CCDC50-202ENST00000392456 TMEM196Q5HYL7 178 aa18.32■□□□□ 0.52
CCDC50-202ENST00000392456 GARNL3Q5VVW2 1013 aa18.32■□□□□ 0.52
CCDC50-202ENST00000392456 METTL11BQ5VVY1 283 aa18.32■□□□□ 0.52
CCDC50-202ENST00000392456 PIWIL4Q7Z3Z4 852 aaKnown RBP18.32■□□□□ 0.52
CCDC50-202ENST00000392456 C11orf96Q7Z7L8 435 aa18.32■□□□□ 0.52
CCDC50-202ENST00000392456 FAM156AQ8NDB6 213 aa18.32■□□□□ 0.52
CCDC50-202ENST00000392456 TESCQ96BS2 214 aa18.32■□□□□ 0.52
CCDC50-202ENST00000392456 KCTD14Q9BQ13 255 aaPredicted RBP18.32■□□□□ 0.52
CCDC50-202ENST00000392456 WDR41Q9HAD4 459 aa18.32■□□□□ 0.52
CCDC50-202ENST00000392456 ZNF556Q9HAH1 456 aa18.32■□□□□ 0.52
CCDC50-202ENST00000392456 CD93Q9NPY3 652 aa18.32■□□□□ 0.52
CCDC50-202ENST00000392456 KCNE2Q9Y6J6 123 aa18.32■□□□□ 0.52
CCDC50-202ENST00000392456 IGLV3-16A0A075B6K0 115 aa18.32■□□□□ 0.52
CCDC50-202ENST00000392456 SHISA7A6NL88 538 aa18.32■□□□□ 0.52
CCDC50-202ENST00000392456 BTN3A1O00481 513 aa18.32■□□□□ 0.52
CCDC50-202ENST00000392456 TRIM38O00635 465 aa18.32■□□□□ 0.52
CCDC50-202ENST00000392456 IPO13O94829 963 aaKnown RBP18.32■□□□□ 0.52
CCDC50-202ENST00000392456 TP53P04637 393 aaPredicted RBP18.32■□□□□ 0.52
CCDC50-202ENST00000392456 MPSTP25325 297 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms