RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 OR4K3Q96R72 315 aa15.67■□□□□ 0.1
PTPRK-208ENST00000392449 SLX1AQ9BQ83 275 aa15.67■□□□□ 0.1
PTPRK-208ENST00000392449 SGPP1Q9BX95 441 aa15.67■□□□□ 0.1
PTPRK-208ENST00000392449 OLAHQ9NV23 265 aa15.67■□□□□ 0.1
PTPRK-208ENST00000392449 H0YIG0 161 aa15.66■□□□□ 0.1
PTPRK-208ENST00000392449 DNAJB6O75190 326 aa15.66■□□□□ 0.1
PTPRK-208ENST00000392449 TTC4O95801 387 aa15.66■□□□□ 0.1
PTPRK-208ENST00000392449 ZNF33BQ06732 778 aa15.66■□□□□ 0.1
PTPRK-208ENST00000392449 SP140Q13342 867 aa15.66■□□□□ 0.1
PTPRK-208ENST00000392449 TEDDM1Q5T9Z0 273 aa15.66■□□□□ 0.1
PTPRK-208ENST00000392449 HECTD2Q5U5R9 776 aa15.66■□□□□ 0.1
PTPRK-208ENST00000392449 CAPN13Q6MZZ7 669 aaPredicted RBP15.66■□□□□ 0.1
PTPRK-208ENST00000392449 LRRC8EQ6NSJ5 796 aa15.66■□□□□ 0.1
PTPRK-208ENST00000392449 ASPGQ86U10 573 aa15.66■□□□□ 0.1
PTPRK-208ENST00000392449 LURAP1LQ8IV03 231 aa15.66■□□□□ 0.1
PTPRK-208ENST00000392449 PALM2Q8IXS6 379 aa15.66■□□□□ 0.1
PTPRK-208ENST00000392449 ZNF740Q8NDX6 193 aa15.66■□□□□ 0.1
PTPRK-208ENST00000392449 SLC13A3Q8WWT9 602 aa15.66■□□□□ 0.1
PTPRK-208ENST00000392449 CYTH2Q99418 400 aa15.66■□□□□ 0.1
PTPRK-208ENST00000392449 TRIM51Q9BSJ1 452 aa15.66■□□□□ 0.1
PTPRK-208ENST00000392449 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.66■□□□□ 0.19e-8■□□□□ 11.2
PTPRK-208ENST00000392449 SPNS1Q9H2V7 528 aa15.66■□□□□ 0.1
PTPRK-208ENST00000392449 ARL15Q9NXU5 204 aa15.66■□□□□ 0.1
PTPRK-208ENST00000392449 NAALAD2Q9Y3Q0 740 aa15.66■□□□□ 0.1
PTPRK-208ENST00000392449 CTAGE15A4D2H0 777 aa15.65■□□□□ 0.1
PTPRK-208ENST00000392449 A8MUI8 341 aa15.65■□□□□ 0.1
PTPRK-208ENST00000392449 CES2O00748 559 aa15.65■□□□□ 0.1
PTPRK-208ENST00000392449 WISP2O76076 250 aa15.65■□□□□ 0.1
PTPRK-208ENST00000392449 GUCA1CO95843 209 aa15.65■□□□□ 0.1
PTPRK-208ENST00000392449 FDXRP22570 491 aa15.65■□□□□ 0.1
PTPRK-208ENST00000392449 HRH2P25021 359 aa15.65■□□□□ 0.1
PTPRK-208ENST00000392449 PMP22Q01453 160 aa15.65■□□□□ 0.1
PTPRK-208ENST00000392449 PDAP1Q13442 181 aaKnown RBP15.65■□□□□ 0.1
PTPRK-208ENST00000392449 CATSPEREQ5SY80 951 aa15.65■□□□□ 0.1
PTPRK-208ENST00000392449 ZNF324BQ6AW86 544 aaPredicted RBP15.65■□□□□ 0.1
PTPRK-208ENST00000392449 RPUSD3Q6P087 351 aaKnown RBP15.65■□□□□ 0.1
PTPRK-208ENST00000392449 LCTLQ6UWM7 567 aa15.65■□□□□ 0.1
PTPRK-208ENST00000392449 RIPOR1Q6ZS17 1223 aa15.65■□□□□ 0.1
PTPRK-208ENST00000392449 CPEB2Q7Z5Q1 589 aaKnown RBP15.65■□□□□ 0.1
PTPRK-208ENST00000392449 ANKRD37Q7Z713 158 aa15.65■□□□□ 0.1
PTPRK-208ENST00000392449 CTAGE6Q86UF2 777 aa15.65■□□□□ 0.1
PTPRK-208ENST00000392449 BCORP1Q8N888 145 aa15.65■□□□□ 0.1
PTPRK-208ENST00000392449 CAMKVQ8NCB2 501 aa15.65■□□□□ 0.1
PTPRK-208ENST00000392449 METTL21AQ8WXB1 218 aa15.65■□□□□ 0.1
PTPRK-208ENST00000392449 HAS2Q92819 552 aa15.65■□□□□ 0.1
PTPRK-208ENST00000392449 SLCO2A1Q92959 643 aa15.65■□□□□ 0.1
PTPRK-208ENST00000392449 PEX11GQ96HA9 241 aa15.65■□□□□ 0.1
PTPRK-208ENST00000392449 TUBB6Q9BUF5 446 aa15.65■□□□□ 0.1
PTPRK-208ENST00000392449 PCBD2Q9H0N5 130 aa15.65■□□□□ 0.1
PTPRK-208ENST00000392449 ANKHQ9HCJ1 492 aa15.65■□□□□ 0.1
PTPRK-208ENST00000392449 PSAT1Q9Y617 370 aa15.65■□□□□ 0.1
PTPRK-208ENST00000392449 TRAV17A0A0B4J275 112 aa15.65■□□□□ 0.1
PTPRK-208ENST00000392449 SLC16A5O15375 505 aa15.65■□□□□ 0.1
PTPRK-208ENST00000392449 NDUFS4O43181 175 aa15.65■□□□□ 0.1
PTPRK-208ENST00000392449 ZSCAN12O43309 604 aa15.65■□□□□ 0.1
PTPRK-208ENST00000392449 MAN1A2O60476 641 aa15.65■□□□□ 0.1
PTPRK-208ENST00000392449 ZG16O60844 167 aa15.65■□□□□ 0.1
PTPRK-208ENST00000392449 TDGF1P3P51864 188 aa15.65■□□□□ 0.1
PTPRK-208ENST00000392449 IL2P60568 153 aa15.65■□□□□ 0.1
PTPRK-208ENST00000392449 OLR1P78380 273 aa15.65■□□□□ 0.1
PTPRK-208ENST00000392449 BTBD16Q32M84 506 aa15.65■□□□□ 0.1
PTPRK-208ENST00000392449 C1QL3Q5VWW1 255 aa15.65■□□□□ 0.1
PTPRK-208ENST00000392449 TMEM207Q6UWW9 146 aa15.65■□□□□ 0.1
PTPRK-208ENST00000392449 KIAA0408Q6ZU52 694 aa15.65■□□□□ 0.1
PTPRK-208ENST00000392449 FJX1Q86VR8 437 aa15.65■□□□□ 0.1
PTPRK-208ENST00000392449 ANKMY2Q8IV38 441 aa15.65■□□□□ 0.1
PTPRK-208ENST00000392449 MFSD9Q8NBP5 474 aa15.65■□□□□ 0.1
PTPRK-208ENST00000392449 TSLPQ969D9 159 aa15.65■□□□□ 0.1
PTPRK-208ENST00000392449 THAP11Q96EK4 314 aa15.65■□□□□ 0.1
PTPRK-208ENST00000392449 TSNARE1Q96NA8 513 aa15.65■□□□□ 0.1
PTPRK-208ENST00000392449 OR1F1O43749 312 aa15.64■□□□□ 0.09
PTPRK-208ENST00000392449 SERPIND1P05546 499 aa15.64■□□□□ 0.09
PTPRK-208ENST00000392449 HIST1H2AGP0C0S8 130 aaPredicted RBP15.64■□□□□ 0.09
PTPRK-208ENST00000392449 HIST1H2ADP20671 130 aa15.64■□□□□ 0.09
PTPRK-208ENST00000392449 SAT1P21673 171 aa15.64■□□□□ 0.09
PTPRK-208ENST00000392449 MST1P26927 711 aa15.64■□□□□ 0.09
PTPRK-208ENST00000392449 ZNF460Q14592 562 aa15.64■□□□□ 0.09
PTPRK-208ENST00000392449 FASTKD3Q14CZ7 662 aaKnown RBP15.64■□□□□ 0.09
PTPRK-208ENST00000392449 ABHD17BQ5VST6 288 aa15.64■□□□□ 0.09
PTPRK-208ENST00000392449 PCGF5Q86SE9 256 aa15.64■□□□□ 0.09
PTPRK-208ENST00000392449 OR56A3Q8NH54 315 aa15.64■□□□□ 0.09
PTPRK-208ENST00000392449 SNF8Q96H20 258 aa15.64■□□□□ 0.09
PTPRK-208ENST00000392449 HIST1H2AHQ96KK5 128 aa15.64■□□□□ 0.09
PTPRK-208ENST00000392449 HIST1H2AJQ99878 128 aa15.64■□□□□ 0.09
PTPRK-208ENST00000392449 NAT9Q9BTE0 207 aa15.64■□□□□ 0.09
PTPRK-208ENST00000392449 H2AFJQ9BTM1 129 aa15.64■□□□□ 0.09
PTPRK-208ENST00000392449 TRIM31Q9BZY9 425 aa15.64■□□□□ 0.09
PTPRK-208ENST00000392449 ANKRD10Q9NXR5 420 aa15.64■□□□□ 0.09
PTPRK-208ENST00000392449 STMN3Q9NZ72 180 aa15.64■□□□□ 0.09
PTPRK-208ENST00000392449 OR5H15A6NDH6 313 aa15.63■□□□□ 0.09
PTPRK-208ENST00000392449 PCDH17O14917 1159 aa15.63■□□□□ 0.09
PTPRK-208ENST00000392449 TP73O15350 636 aa15.63■□□□□ 0.09
PTPRK-208ENST00000392449 PIAS1O75925 651 aa15.63■□□□□ 0.09
PTPRK-208ENST00000392449 SLC35G6P0C7Q6 338 aa15.63■□□□□ 0.09
PTPRK-208ENST00000392449 CCND1P24385 295 aa15.63■□□□□ 0.09
PTPRK-208ENST00000392449 CCR8P51685 355 aa15.63■□□□□ 0.09
PTPRK-208ENST00000392449 ITGA8P53708 1063 aa15.63■□□□□ 0.09
PTPRK-208ENST00000392449 RHAGQ02094 409 aa15.63■□□□□ 0.09
PTPRK-208ENST00000392449 ABRAXAS2Q15018 415 aa15.63■□□□□ 0.09
PTPRK-208ENST00000392449 DEFB134Q4QY38 66 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms