RNA–Protein interactions for RNA: ENST00000390466.1

TRAV39-201, Transcript of T cell receptor alpha variable 39, humanhuman

APPRIS P1 BASIC

Gene TRAV39, Length 331 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39-201ENST00000390466 DNAJB8Q8NHS0 232 aa3.33□□□□□ -1.88
TRAV39-201ENST00000390466 VANGL1Q8TAA9 524 aaPredicted RBP3.33□□□□□ -1.88
TRAV39-201ENST00000390466 LRRC20Q8TCA0 184 aa3.33□□□□□ -1.88
TRAV39-201ENST00000390466 LKAAEAR1Q8TD35 194 aa3.33□□□□□ -1.88
TRAV39-201ENST00000390466 CREB3L4Q8TEY5 395 aa3.33□□□□□ -1.88
TRAV39-201ENST00000390466 DEDD2Q8WXF8 326 aa3.33□□□□□ -1.88
TRAV39-201ENST00000390466 EDEM1Q92611 657 aa3.33□□□□□ -1.88
TRAV39-201ENST00000390466 EMID1Q96A84 441 aaPredicted RBP3.33□□□□□ -1.88
TRAV39-201ENST00000390466 MTFMTQ96DP5 389 aaKnown RBP3.33□□□□□ -1.88
TRAV39-201ENST00000390466 C11orf24Q96F05 449 aaPredicted RBP3.33□□□□□ -1.88
TRAV39-201ENST00000390466 ZBED6CLQ96FA7 236 aaPredicted RBP3.33□□□□□ -1.88
TRAV39-201ENST00000390466 SCMH1Q96GD3 660 aa3.33□□□□□ -1.88
TRAV39-201ENST00000390466 CRELD1Q96HD1 420 aa3.33□□□□□ -1.88
TRAV39-201ENST00000390466 CDKN2AIPNLQ96HQ2 116 aa3.33□□□□□ -1.88
TRAV39-201ENST00000390466 TNIP3Q96KP6 325 aa3.33□□□□□ -1.88
TRAV39-201ENST00000390466 FCRL2Q96LA5 508 aaPredicted RBP3.33□□□□□ -1.88
TRAV39-201ENST00000390466 SENP8Q96LD8 212 aa3.33□□□□□ -1.88
TRAV39-201ENST00000390466 PPP3R2Q96LZ3 170 aa3.33□□□□□ -1.88
TRAV39-201ENST00000390466 SPATA33Q96N06 139 aa3.33□□□□□ -1.88
TRAV39-201ENST00000390466 SORCS2Q96PQ0 1159 aa3.33□□□□□ -1.88
TRAV39-201ENST00000390466 KCNC2Q96PR1 638 aa3.33□□□□□ -1.88
TRAV39-201ENST00000390466 CDK15Q96Q40 435 aa3.33□□□□□ -1.88
TRAV39-201ENST00000390466 SMIM14Q96QK8 99 aa3.33□□□□□ -1.88
TRAV39-201ENST00000390466 PPP1R16BQ96T49 567 aa3.33□□□□□ -1.88
TRAV39-201ENST00000390466 C17orf62Q9BQA9 187 aa3.33□□□□□ -1.88
TRAV39-201ENST00000390466 MARVELD1Q9BSK0 173 aa3.33□□□□□ -1.88
TRAV39-201ENST00000390466 CCM2Q9BSQ5 444 aa3.33□□□□□ -1.88
TRAV39-201ENST00000390466 FUZQ9BT04 418 aa3.33□□□□□ -1.88
TRAV39-201ENST00000390466 ZBED2Q9BTP6 218 aa3.33□□□□□ -1.88
TRAV39-201ENST00000390466 FSD1LQ9BXM9 530 aa3.33□□□□□ -1.88
TRAV39-201ENST00000390466 BEX2Q9BXY8 128 aa3.33□□□□□ -1.88
TRAV39-201ENST00000390466 REG4Q9BYZ8 158 aa3.33□□□□□ -1.88
TRAV39-201ENST00000390466 PRRG3Q9BZD7 231 aa3.33□□□□□ -1.88
TRAV39-201ENST00000390466 UCK2Q9BZX2 261 aa3.33□□□□□ -1.88
TRAV39-201ENST00000390466 REXO4Q9GZR2 422 aaKnown RBP3.33□□□□□ -1.88
TRAV39-201ENST00000390466 SLC22A4Q9H015 551 aa3.33□□□□□ -1.88
TRAV39-201ENST00000390466 SPATC1LQ9H0A9 340 aa3.33□□□□□ -1.88
TRAV39-201ENST00000390466 P2RY12Q9H244 342 aa3.33□□□□□ -1.88
TRAV39-201ENST00000390466 TMEM245Q9H330 911 aa3.33□□□□□ -1.88
TRAV39-201ENST00000390466 FAM83DQ9H4H8 585 aa3.33□□□□□ -1.88
TRAV39-201ENST00000390466 RNF121Q9H920 327 aa3.33□□□□□ -1.88
TRAV39-201ENST00000390466 MYOZ2Q9NPC6 264 aa3.33□□□□□ -1.88
TRAV39-201ENST00000390466 RPRD1BQ9NQG5 326 aaKnown RBP3.33□□□□□ -1.88
TRAV39-201ENST00000390466 DYRK4Q9NR20 520 aa3.33□□□□□ -1.88
TRAV39-201ENST00000390466 DIABLOQ9NR28 239 aa3.33□□□□□ -1.88
TRAV39-201ENST00000390466 PDGFCQ9NRA1 345 aa3.33□□□□□ -1.88
TRAV39-201ENST00000390466 RASSF1Q9NS23 344 aa3.33□□□□□ -1.88
TRAV39-201ENST00000390466 KRT84Q9NSB2 600 aa3.33□□□□□ -1.88
TRAV39-201ENST00000390466 FARSBQ9NSD9 589 aaKnown RBP3.33□□□□□ -1.88
TRAV39-201ENST00000390466 OLA1Q9NTK5 396 aaKnown RBP3.33□□□□□ -1.88
TRAV39-201ENST00000390466 CATSPERZQ9NTU4 200 aa3.33□□□□□ -1.88
TRAV39-201ENST00000390466 DDX28Q9NUL7 540 aaKnown RBP3.33□□□□□ -1.88
TRAV39-201ENST00000390466 ABCB8Q9NUT2 735 aa3.33□□□□□ -1.88
TRAV39-201ENST00000390466 GIMAP4Q9NUV9 329 aa3.33□□□□□ -1.88
TRAV39-201ENST00000390466 TMLHEQ9NVH6 421 aa3.33□□□□□ -1.88
TRAV39-201ENST00000390466 NLE1Q9NVX2 485 aaPredicted RBP3.33□□□□□ -1.88
TRAV39-201ENST00000390466 TMEM248Q9NWD8 314 aa3.33□□□□□ -1.88
TRAV39-201ENST00000390466 NDUFB11Q9NX14 153 aa3.33□□□□□ -1.88
TRAV39-201ENST00000390466 GLTPQ9NZD2 209 aa3.33□□□□□ -1.88
TRAV39-201ENST00000390466 MAT2BQ9NZL9 334 aa3.33□□□□□ -1.88
TRAV39-201ENST00000390466 MPP6Q9NZW5 540 aa3.33□□□□□ -1.88
TRAV39-201ENST00000390466 NDUFAF4Q9P032 175 aa3.33□□□□□ -1.88
TRAV39-201ENST00000390466 PDP1Q9P0J1 537 aaPredicted RBP3.33□□□□□ -1.88
TRAV39-201ENST00000390466 UXTQ9UBK9 157 aaPredicted RBP3.33□□□□□ -1.88
TRAV39-201ENST00000390466 CACNG4Q9UBN1 327 aa3.33□□□□□ -1.88
TRAV39-201ENST00000390466 SPASTQ9UBP0 616 aa3.33□□□□□ -1.88
TRAV39-201ENST00000390466 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.33□□□□□ -1.88
TRAV39-201ENST00000390466 TRPS1Q9UHF7 1281 aa3.33□□□□□ -1.88
TRAV39-201ENST00000390466 ZNF490Q9ULM2 529 aaPredicted RBP3.33□□□□□ -1.88
TRAV39-201ENST00000390466 RNF112Q9ULX5 631 aa3.33□□□□□ -1.88
TRAV39-201ENST00000390466 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.33□□□□□ -1.88
TRAV39-201ENST00000390466 SCML1Q9UN30 329 aa3.33□□□□□ -1.88
TRAV39-201ENST00000390466 SATB2Q9UPW6 733 aa3.33□□□□□ -1.88
TRAV39-201ENST00000390466 PADI2Q9Y2J8 665 aa3.33□□□□□ -1.88
TRAV39-201ENST00000390466 SF3B6Q9Y3B4 125 aaKnown RBP3.33□□□□□ -1.88
TRAV39-201ENST00000390466 SAMHD1Q9Y3Z3 626 aaKnown RBP3.33□□□□□ -1.88
TRAV39-201ENST00000390466 SPEF1Q9Y4P9 236 aa3.33□□□□□ -1.88
TRAV39-201ENST00000390466 HS3ST4Q9Y661 456 aa3.33□□□□□ -1.88
TRAV39-201ENST00000390466 ARL5AQ9Y689 179 aa3.33□□□□□ -1.88
TRAV39-201ENST00000390466 GJA3Q9Y6H8 435 aa3.33□□□□□ -1.88
TRAV39-201ENST00000390466 CSNK1G3Q9Y6M4 447 aa3.33□□□□□ -1.88
TRAV39-201ENST00000390466 AP1M2Q9Y6Q5 423 aa3.33□□□□□ -1.88
TRAV39-201ENST00000390466 SHISA3A0PJX4 238 aa3.32□□□□□ -1.88
TRAV39-201ENST00000390466 SERTM1A2A2V5 107 aa3.32□□□□□ -1.88
TRAV39-201ENST00000390466 MBLAC1A4D2B0 266 aaPredicted RBP3.32□□□□□ -1.88
TRAV39-201ENST00000390466 EFCAB10A6NFE3 127 aa3.32□□□□□ -1.88
TRAV39-201ENST00000390466 OR6C70A6NIJ9 312 aa3.32□□□□□ -1.88
TRAV39-201ENST00000390466 FAM170BA6NMN3 283 aa3.32□□□□□ -1.88
TRAV39-201ENST00000390466 NT5C1B-RDH14C9J2C7 533 aa3.32□□□□□ -1.88
TRAV39-201ENST00000390466 E9PAM4 449 aa3.32□□□□□ -1.88
TRAV39-201ENST00000390466 H3BM21 787 aa3.32□□□□□ -1.88
TRAV39-201ENST00000390466 H7C0S8 307 aa3.32□□□□□ -1.88
TRAV39-201ENST00000390466 SGK494L7N484 410 aa3.32□□□□□ -1.88
TRAV39-201ENST00000390466 BTN3A1O00481 513 aa3.32□□□□□ -1.88
TRAV39-201ENST00000390466 TFECO14948 347 aaPredicted RBP3.32□□□□□ -1.88
TRAV39-201ENST00000390466 GSTA4O15217 222 aa3.32□□□□□ -1.88
TRAV39-201ENST00000390466 PDPK1O15530 556 aa3.32□□□□□ -1.88
TRAV39-201ENST00000390466 PROM1O43490 865 aa3.32□□□□□ -1.88
TRAV39-201ENST00000390466 CHP2O43745 196 aa3.32□□□□□ -1.88
TRAV39-201ENST00000390466 CSO75390 466 aaKnown RBP3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms