RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 XRCC1P18887 633 aaPredicted RBP11.69□□□□□ -0.54
SPTBN1-203ENST00000389980 POLR2CP19387 275 aaPredicted RBP11.69□□□□□ -0.54
SPTBN1-203ENST00000389980 MAPK1P28482 360 aa11.69□□□□□ -0.54
SPTBN1-203ENST00000389980 ATXN3P54252 364 aaPredicted RBP11.69□□□□□ -0.54
SPTBN1-203ENST00000389980 CLDN8P56748 225 aa11.69□□□□□ -0.54
SPTBN1-203ENST00000389980 UBE2IP63279 158 aaKnown RBP11.69□□□□□ -0.54
SPTBN1-203ENST00000389980 NFYCQ13952 458 aa11.69□□□□□ -0.54
SPTBN1-203ENST00000389980 ZNF423Q2M1K9 1284 aa11.69□□□□□ -0.54
SPTBN1-203ENST00000389980 PIGGQ5H8A4 983 aa11.69□□□□□ -0.54
SPTBN1-203ENST00000389980 C8orf82Q6P1X6 216 aaPredicted RBP11.69□□□□□ -0.54
SPTBN1-203ENST00000389980 NET1Q7Z628 596 aaPredicted RBP11.69□□□□□ -0.54
SPTBN1-203ENST00000389980 SYT12Q8IV01 421 aa11.69□□□□□ -0.54
SPTBN1-203ENST00000389980 HIPK4Q8NE63 616 aa11.69□□□□□ -0.54
SPTBN1-203ENST00000389980 EDAQ92838 391 aa11.69□□□□□ -0.54
SPTBN1-203ENST00000389980 UBE2E3Q969T4 207 aa11.69□□□□□ -0.54
SPTBN1-203ENST00000389980 LRRC58Q96CX6 371 aa11.69□□□□□ -0.54
SPTBN1-203ENST00000389980 FCRL1Q96LA6 429 aa11.69□□□□□ -0.54
SPTBN1-203ENST00000389980 ZBTB18Q99592 522 aa11.69□□□□□ -0.54
SPTBN1-203ENST00000389980 DUSP15Q9H1R2 295 aaPredicted RBP11.69□□□□□ -0.54
SPTBN1-203ENST00000389980 CLMPQ9H6B4 373 aa11.69□□□□□ -0.54
SPTBN1-203ENST00000389980 SYNPO2LQ9H987 977 aa11.69□□□□□ -0.54
SPTBN1-203ENST00000389980 NDE1Q9NXR1 346 aa11.69□□□□□ -0.54
SPTBN1-203ENST00000389980 RUVBL1Q9Y265 456 aaKnown RBP11.69□□□□□ -0.54
SPTBN1-203ENST00000389980 TMEM131Q92545 1883 aa11.69□□□□□ -0.54
SPTBN1-203ENST00000389980 GSAPA4D1B5 854 aa11.68□□□□□ -0.54
SPTBN1-203ENST00000389980 RTCAO00442 366 aaKnown RBP11.68□□□□□ -0.54
SPTBN1-203ENST00000389980 LMNAP02545 664 aaKnown RBP11.68□□□□□ -0.54
SPTBN1-203ENST00000389980 ANXA4P09525 319 aaPredicted RBP11.68□□□□□ -0.54
SPTBN1-203ENST00000389980 LINGO3P0C6S8 592 aa11.68□□□□□ -0.54
SPTBN1-203ENST00000389980 GRIA3P42263 894 aa11.68□□□□□ -0.54
SPTBN1-203ENST00000389980 PIK3CBP42338 1070 aa11.68□□□□□ -0.54
SPTBN1-203ENST00000389980 SLC7A2P52569 658 aa11.68□□□□□ -0.54
SPTBN1-203ENST00000389980 MAZP56270 477 aaKnown RBP11.68□□□□□ -0.54
SPTBN1-203ENST00000389980 NXPH1P58417 271 aa11.68□□□□□ -0.54
SPTBN1-203ENST00000389980 PHC1P78364 1004 aa11.68□□□□□ -0.54
SPTBN1-203ENST00000389980 HKDC1Q2TB90 917 aa11.68□□□□□ -0.54
SPTBN1-203ENST00000389980 PGS1Q32NB8 556 aa11.68□□□□□ -0.54
SPTBN1-203ENST00000389980 ANKRD26P1Q6NSI1 321 aa11.68□□□□□ -0.54
SPTBN1-203ENST00000389980 LPCAT2Q7L5N7 544 aa11.68□□□□□ -0.54
SPTBN1-203ENST00000389980 COMMD6Q7Z4G1 85 aa11.68□□□□□ -0.54
SPTBN1-203ENST00000389980 IQCHQ86VS3 1027 aa11.68□□□□□ -0.54
SPTBN1-203ENST00000389980 DNAJB14Q8TBM8 379 aa11.68□□□□□ -0.54
SPTBN1-203ENST00000389980 TSPEARQ8WU66 669 aa11.68□□□□□ -0.54
SPTBN1-203ENST00000389980 NRG4Q8WWG1 115 aa11.68□□□□□ -0.54
SPTBN1-203ENST00000389980 DNASE2BQ8WZ79 361 aa11.68□□□□□ -0.54
SPTBN1-203ENST00000389980 ROPN1LQ96C74 230 aa11.68□□□□□ -0.54
SPTBN1-203ENST00000389980 PPM1MQ96MI6 270 aa11.68□□□□□ -0.54
SPTBN1-203ENST00000389980 F2RL3Q96RI0 385 aa11.68□□□□□ -0.54
SPTBN1-203ENST00000389980 KLHL25Q9H0H3 589 aa11.68□□□□□ -0.54
SPTBN1-203ENST00000389980 LEF1Q9UJU2 399 aaPredicted RBP11.68□□□□□ -0.54
SPTBN1-203ENST00000389980 PRPF19Q9UMS4 504 aaKnown RBP11.68□□□□□ -0.54
SPTBN1-203ENST00000389980 POMPQ9Y244 141 aa11.68□□□□□ -0.54
SPTBN1-203ENST00000389980 SCN3AQ9NY46 2000 aa11.68□□□□□ -0.54
SPTBN1-203ENST00000389980 GNG14A0A1W2PPG7 69 aa11.68□□□□□ -0.54
SPTBN1-203ENST00000389980 ARHGAP10A1A4S6 786 aa11.68□□□□□ -0.54
SPTBN1-203ENST00000389980 BCAT2O15382 392 aaPredicted RBP11.68□□□□□ -0.54
SPTBN1-203ENST00000389980 YY2O15391 372 aa11.68□□□□□ -0.54
SPTBN1-203ENST00000389980 PCDH7O60245 1069 aa11.68□□□□□ -0.54
SPTBN1-203ENST00000389980 PGRP06401 933 aa11.68□□□□□ -0.54
SPTBN1-203ENST00000389980 CXCR2P25025 360 aa11.68□□□□□ -0.54
SPTBN1-203ENST00000389980 PEX19P40855 299 aa11.68□□□□□ -0.54
SPTBN1-203ENST00000389980 BCL6P41182 706 aa11.68□□□□□ -0.54
SPTBN1-203ENST00000389980 HHEXQ03014 270 aa11.68□□□□□ -0.54
SPTBN1-203ENST00000389980 DYNC1I2Q13409 638 aaKnown RBP11.68□□□□□ -0.54
SPTBN1-203ENST00000389980 COL9A2Q14055 689 aaPredicted RBP11.68□□□□□ -0.54
SPTBN1-203ENST00000389980 SPIN4Q56A73 249 aa11.68□□□□□ -0.54
SPTBN1-203ENST00000389980 HACD2Q6Y1H2 254 aa11.68□□□□□ -0.54
SPTBN1-203ENST00000389980 RIMKLAQ8IXN7 391 aa11.68□□□□□ -0.54
SPTBN1-203ENST00000389980 OR7A2PQ8NGA2 310 aa11.68□□□□□ -0.54
SPTBN1-203ENST00000389980 FLVCR1-AS1Q8TAF5 88 aa11.68□□□□□ -0.54
SPTBN1-203ENST00000389980 TMEM74Q96NL1 305 aa11.68□□□□□ -0.54
SPTBN1-203ENST00000389980 GPATCH1Q9BRR8 931 aaKnown RBP11.68□□□□□ -0.54
SPTBN1-203ENST00000389980 RHBGQ9H310 441 aa11.68□□□□□ -0.54
SPTBN1-203ENST00000389980 SPAG4Q9NPE6 437 aa11.68□□□□□ -0.54
SPTBN1-203ENST00000389980 POT1Q9NUX5 634 aa11.68□□□□□ -0.54
SPTBN1-203ENST00000389980 ARID1BQ8NFD5 2236 aaPredicted RBP11.67□□□□□ -0.54
SPTBN1-203ENST00000389980 ASXL3Q9C0F0 2248 aa11.67□□□□□ -0.54
SPTBN1-203ENST00000389980 KIR2DS5A0A0G2JLQ3 304 aa11.67□□□□□ -0.54
SPTBN1-203ENST00000389980 A0A0G2JNG1 304 aa11.67□□□□□ -0.54
SPTBN1-203ENST00000389980 A0A1B0GVT2 93 aa11.67□□□□□ -0.54
SPTBN1-203ENST00000389980 TTC36A6NLP5 189 aa11.67□□□□□ -0.54
SPTBN1-203ENST00000389980 KIR2DS3K7RE56 304 aa11.67□□□□□ -0.54
SPTBN1-203ENST00000389980 MYO1DO94832 1006 aa11.67□□□□□ -0.54
SPTBN1-203ENST00000389980 KLHL18O94889 574 aa11.67□□□□□ -0.54
SPTBN1-203ENST00000389980 KLK1P06870 262 aa11.67□□□□□ -0.54
SPTBN1-203ENST00000389980 UGT2B7P16662 529 aa11.67□□□□□ -0.54
SPTBN1-203ENST00000389980 PTX3P26022 381 aaPredicted RBP11.67□□□□□ -0.54
SPTBN1-203ENST00000389980 CMPK1P30085 196 aa11.67□□□□□ -0.54
SPTBN1-203ENST00000389980 TIA1P31483 386 aaKnown RBP eCLIP11.67□□□□□ -0.54
SPTBN1-203ENST00000389980 DHPSP49366 369 aaPredicted RBP11.67□□□□□ -0.54
SPTBN1-203ENST00000389980 PHEXP78562 749 aa11.67□□□□□ -0.54
SPTBN1-203ENST00000389980 CSTF1Q05048 431 aaKnown RBP11.67□□□□□ -0.54
SPTBN1-203ENST00000389980 CYP4F3Q08477 520 aa11.67□□□□□ -0.54
SPTBN1-203ENST00000389980 KIR2DS5Q14953 304 aa11.67□□□□□ -0.54
SPTBN1-203ENST00000389980 ELOCQ15369 112 aa11.67□□□□□ -0.54
SPTBN1-203ENST00000389980 DEFB133Q30KQ1 61 aa11.67□□□□□ -0.54
SPTBN1-203ENST00000389980 TRMT5Q32P41 509 aaKnown RBP11.67□□□□□ -0.54
SPTBN1-203ENST00000389980 RABL3Q5HYI8 236 aa11.67□□□□□ -0.54
SPTBN1-203ENST00000389980 COQ5Q5HYK3 327 aa11.67□□□□□ -0.54
SPTBN1-203ENST00000389980 C6orf163Q5TEZ5 329 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms