RNA–Protein interactions for RNA: ENST00000384433.1

RNU6-549P-201, Transcript of RNA, U6 small nuclear 549, pseudogene, humanhuman

BASIC

Gene RNU6-549P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-549P-201ENST00000384433 NPIPA3F8WFD2 350 aa4.03□□□□□ -1.76
RNU6-549P-201ENST00000384433 DDX39AO00148 427 aaKnown RBP4.03□□□□□ -1.76
RNU6-549P-201ENST00000384433 ZNF195O14628 629 aa4.03□□□□□ -1.76
RNU6-549P-201ENST00000384433 EPHB6O15197 1021 aa4.03□□□□□ -1.76
RNU6-549P-201ENST00000384433 EXTL3O43909 919 aa4.03□□□□□ -1.76
RNU6-549P-201ENST00000384433 AMBPP02760 352 aa4.03□□□□□ -1.76
RNU6-549P-201ENST00000384433 P4HA1P13674 534 aa4.03□□□□□ -1.76
RNU6-549P-201ENST00000384433 CETN2P41208 172 aa4.03□□□□□ -1.76
RNU6-549P-201ENST00000384433 MAGEA11P43364 429 aa4.03□□□□□ -1.76
RNU6-549P-201ENST00000384433 CLDN17P56750 224 aa4.03□□□□□ -1.76
RNU6-549P-201ENST00000384433 OR1D5P58170 312 aa4.03□□□□□ -1.76
RNU6-549P-201ENST00000384433 HERV-K104P61576 105 aa4.03□□□□□ -1.76
RNU6-549P-201ENST00000384433 NPRL3Q12980 569 aa4.03□□□□□ -1.76
RNU6-549P-201ENST00000384433 TMEM132DQ14C87 1099 aa4.03□□□□□ -1.76
RNU6-549P-201ENST00000384433 ZNF74Q16587 644 aa4.03□□□□□ -1.76
RNU6-549P-201ENST00000384433 ZNF789Q5FWF6 425 aa4.03□□□□□ -1.76
RNU6-549P-201ENST00000384433 SLC25A47Q6Q0C1 308 aa4.03□□□□□ -1.76
RNU6-549P-201ENST00000384433 DHRS11Q6UWP2 260 aa4.03□□□□□ -1.76
RNU6-549P-201ENST00000384433 SLC24A5Q71RS6 500 aa4.03□□□□□ -1.76
RNU6-549P-201ENST00000384433 LACC1Q8IV20 430 aa4.03□□□□□ -1.76
RNU6-549P-201ENST00000384433 SERPINA12Q8IW75 414 aa4.03□□□□□ -1.76
RNU6-549P-201ENST00000384433 CCDC60Q8IWA6 550 aaPredicted RBP4.03□□□□□ -1.76
RNU6-549P-201ENST00000384433 TMEM178AQ8NBL3 297 aa4.03□□□□□ -1.76
RNU6-549P-201ENST00000384433 GIMAP5Q96F15 307 aa4.03□□□□□ -1.76
RNU6-549P-201ENST00000384433 SPATA13Q96N96 652 aa4.03□□□□□ -1.76
RNU6-549P-201ENST00000384433 MAN2C1Q9NTJ4 1040 aa4.03□□□□□ -1.76
RNU6-549P-201ENST00000384433 TRPC4Q9UBN4 977 aa4.03□□□□□ -1.76
RNU6-549P-201ENST00000384433 EPHA6Q9UF33 1036 aa4.03□□□□□ -1.76
RNU6-549P-201ENST00000384433 FETUBQ9UGM5 382 aa4.03□□□□□ -1.76
RNU6-549P-201ENST00000384433 GRID1Q9ULK0 1009 aa4.03□□□□□ -1.76
RNU6-549P-201ENST00000384433 ANGPTL3Q9Y5C1 460 aa4.03□□□□□ -1.76
RNU6-549P-201ENST00000384433 SCN5AQ14524 2016 aa4.02□□□□□ -1.77
RNU6-549P-201ENST00000384433 PFASO15067 1338 aa4.02□□□□□ -1.77
RNU6-549P-201ENST00000384433 RPGRIP1LQ68CZ1 1315 aa4.02□□□□□ -1.77
RNU6-549P-201ENST00000384433 A0A087WUV0 522 aaPredicted RBP4.02□□□□□ -1.77
RNU6-549P-201ENST00000384433 C13orf42A0A1B0GVH6 325 aa4.02□□□□□ -1.77
RNU6-549P-201ENST00000384433 PGRMC2O15173 223 aa4.02□□□□□ -1.77
RNU6-549P-201ENST00000384433 SEC24AO95486 1093 aa4.02□□□□□ -1.77
RNU6-549P-201ENST00000384433 CEACAM1P13688 526 aa4.02□□□□□ -1.77
RNU6-549P-201ENST00000384433 GJB2P29033 226 aa4.02□□□□□ -1.77
RNU6-549P-201ENST00000384433 RBMS1P29558 406 aaKnown RBP4.02□□□□□ -1.77
RNU6-549P-201ENST00000384433 ATP6V1E1P36543 226 aa4.02□□□□□ -1.77
RNU6-549P-201ENST00000384433 LEPRP48357 1165 aaKnown RBP4.02□□□□□ -1.77
RNU6-549P-201ENST00000384433 CSNK2BP67870 215 aa4.02□□□□□ -1.77
RNU6-549P-201ENST00000384433 ARHGAP1Q07960 439 aa4.02□□□□□ -1.77
RNU6-549P-201ENST00000384433 TRA2AQ13595 282 aaKnown RBP eCLIP4.02□□□□□ -1.77
RNU6-549P-201ENST00000384433 TRIM29Q14134 588 aa4.02□□□□□ -1.77
RNU6-549P-201ENST00000384433 CDC37Q16543 378 aaPredicted RBP4.02□□□□□ -1.77
RNU6-549P-201ENST00000384433 C2orf76Q3KRA6 126 aa4.02□□□□□ -1.77
RNU6-549P-201ENST00000384433 PDLIM3Q53GG5 364 aaPredicted RBP4.02□□□□□ -1.77
RNU6-549P-201ENST00000384433 KCTD11Q693B1 232 aa4.02□□□□□ -1.77
RNU6-549P-201ENST00000384433 ZNF790Q6PG37 636 aa4.02□□□□□ -1.77
RNU6-549P-201ENST00000384433 LEKR1Q6ZMV7 388 aa4.02□□□□□ -1.77
RNU6-549P-201ENST00000384433 C18orf65Q6ZTR6 163 aa4.02□□□□□ -1.77
RNU6-549P-201ENST00000384433 COX8CQ7Z4L0 72 aa4.02□□□□□ -1.77
RNU6-549P-201ENST00000384433 PRSS42Q7Z5A4 293 aa4.02□□□□□ -1.77
RNU6-549P-201ENST00000384433 PTAR1Q7Z6K3 402 aaPredicted RBP4.02□□□□□ -1.77
RNU6-549P-201ENST00000384433 DCUN1D3Q8IWE4 304 aa4.02□□□□□ -1.77
RNU6-549P-201ENST00000384433 DYRK2Q92630 601 aa4.02□□□□□ -1.77
RNU6-549P-201ENST00000384433 AZIN2Q96A70 460 aa4.02□□□□□ -1.77
RNU6-549P-201ENST00000384433 LGALS12Q96DT0 336 aa4.02□□□□□ -1.77
RNU6-549P-201ENST00000384433 C5orf30Q96GV9 206 aa4.02□□□□□ -1.77
RNU6-549P-201ENST00000384433 C2orf48Q96LS8 159 aa4.02□□□□□ -1.77
RNU6-549P-201ENST00000384433 FAM218AQ96MZ4 157 aa4.02□□□□□ -1.77
RNU6-549P-201ENST00000384433 UHRF2Q96PU4 802 aa4.02□□□□□ -1.77
RNU6-549P-201ENST00000384433 LPAR4Q99677 370 aa4.02□□□□□ -1.77
RNU6-549P-201ENST00000384433 C17orf62Q9BQA9 187 aa4.02□□□□□ -1.77
RNU6-549P-201ENST00000384433 IDI2Q9BXS1 227 aa4.02□□□□□ -1.77
RNU6-549P-201ENST00000384433 TRIM7Q9C029 511 aa4.02□□□□□ -1.77
RNU6-549P-201ENST00000384433 GPR173Q9NS66 373 aa4.02□□□□□ -1.77
RNU6-549P-201ENST00000384433 TBC1D13Q9NVG8 400 aa4.02□□□□□ -1.77
RNU6-549P-201ENST00000384433 C19orf25Q9UFG5 118 aaPredicted RBP4.02□□□□□ -1.77
RNU6-549P-201ENST00000384433 PSORS1C1Q9UIG5 152 aa4.02□□□□□ -1.77
RNU6-549P-201ENST00000384433 PILRBQ9UKJ0 227 aa4.02□□□□□ -1.77
RNU6-549P-201ENST00000384433 POMT2Q9UKY4 750 aa4.02□□□□□ -1.77
RNU6-549P-201ENST00000384433 ICAM5Q9UMF0 924 aa4.02□□□□□ -1.77
RNU6-549P-201ENST00000384433 NCKAP1Q9Y2A7 1128 aa4.02□□□□□ -1.77
RNU6-549P-201ENST00000384433 KNSTRNQ9Y448 316 aa4.02□□□□□ -1.77
RNU6-549P-201ENST00000384433 TEX264Q9Y6I9 313 aa4.02□□□□□ -1.77
RNU6-549P-201ENST00000384433 COLEC10Q9Y6Z7 277 aa4.02□□□□□ -1.77
RNU6-549P-201ENST00000384433 A0A0G2JLW4 131 aa4.01□□□□□ -1.77
RNU6-549P-201ENST00000384433 MAGEB16A2A368 324 aa4.01□□□□□ -1.77
RNU6-549P-201ENST00000384433 ZNF732B4DXR9 585 aa4.01□□□□□ -1.77
RNU6-549P-201ENST00000384433 BLOC1S5-TXNDC5H3BN57 136 aa4.01□□□□□ -1.77
RNU6-549P-201ENST00000384433 SAP30O75446 220 aa4.01□□□□□ -1.77
RNU6-549P-201ENST00000384433 AP2A2O94973 939 aa4.01□□□□□ -1.77
RNU6-549P-201ENST00000384433 BAG2O95816 211 aa4.01□□□□□ -1.77
RNU6-549P-201ENST00000384433 CALCAP01258 141 aa4.01□□□□□ -1.77
RNU6-549P-201ENST00000384433 MT-ND2P03891 347 aa4.01□□□□□ -1.77
RNU6-549P-201ENST00000384433 RAF1P04049 648 aa4.01□□□□□ -1.77
RNU6-549P-201ENST00000384433 SLC2A2P11168 524 aaPredicted RBP4.01□□□□□ -1.77
RNU6-549P-201ENST00000384433 HLA-DPA1P20036 260 aa4.01□□□□□ -1.77
RNU6-549P-201ENST00000384433 CHRNB4P30926 498 aa4.01□□□□□ -1.77
RNU6-549P-201ENST00000384433 SOX3P41225 446 aa4.01□□□□□ -1.77
RNU6-549P-201ENST00000384433 MYL7Q01449 175 aa4.01□□□□□ -1.77
RNU6-549P-201ENST00000384433 CBX3Q13185 183 aa4.01□□□□□ -1.77
RNU6-549P-201ENST00000384433 PKN2Q16513 984 aaKnown RBP4.01□□□□□ -1.77
RNU6-549P-201ENST00000384433 KRTAP24-1Q3LI83 254 aa4.01□□□□□ -1.77
RNU6-549P-201ENST00000384433 IFI44LQ53G44 452 aa4.01□□□□□ -1.77
RNU6-549P-201ENST00000384433 LRRC38Q5VT99 294 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms