RNA–Protein interactions for RNA: ENST00000380962.9

LCMT1-201, Transcript of leucine carboxyl methyltransferase 1, humanhuman

TSL 2

Gene LCMT1, Length 1,529 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT1-201ENST00000380962 TMC5Q6UXY8 1006 aa12.84□□□□□ -0.35
LCMT1-201ENST00000380962 NUDT18Q6ZVK8 323 aa12.84□□□□□ -0.35
LCMT1-201ENST00000380962 TRMT11Q7Z4G4 463 aaKnown RBP12.84□□□□□ -0.35
LCMT1-201ENST00000380962 C11orf96Q7Z7L8 435 aa12.84□□□□□ -0.35
LCMT1-201ENST00000380962 ADGRD2Q7Z7M1 963 aa12.84□□□□□ -0.35
LCMT1-201ENST00000380962 CHPFQ8IZ52 775 aa12.84□□□□□ -0.35
LCMT1-201ENST00000380962 OFCC1Q8IZS5 231 aa12.84□□□□□ -0.35
LCMT1-201ENST00000380962 KRT78Q8N1N4 520 aa12.84□□□□□ -0.35
LCMT1-201ENST00000380962 OR2T29Q8NH02 315 aa12.84□□□□□ -0.35
LCMT1-201ENST00000380962 ZFP90Q8TF47 636 aa12.84□□□□□ -0.35
LCMT1-201ENST00000380962 SNX19Q92543 992 aa12.84□□□□□ -0.35
LCMT1-201ENST00000380962 GFM2Q969S9 779 aaKnown RBP12.84□□□□□ -0.35
LCMT1-201ENST00000380962 SH3KBP1Q96B97 665 aa12.84□□□□□ -0.35
LCMT1-201ENST00000380962 DTNBP1Q96EV8 351 aa12.84□□□□□ -0.35
LCMT1-201ENST00000380962 MUS81Q96NY9 551 aa12.84□□□□□ -0.35
LCMT1-201ENST00000380962 DOK1Q99704 481 aa12.84□□□□□ -0.35
LCMT1-201ENST00000380962 NPLQ9BXD5 320 aaPredicted RBP12.84□□□□□ -0.35
LCMT1-201ENST00000380962 ING2Q9H160 280 aa12.84□□□□□ -0.35
LCMT1-201ENST00000380962 PRSS16Q9NQE7 514 aa12.84□□□□□ -0.35
LCMT1-201ENST00000380962 ALPK3Q96L96 1907 aa12.84□□□□□ -0.35
LCMT1-201ENST00000380962 LRRK1Q38SD2 2015 aa12.83□□□□□ -0.35
LCMT1-201ENST00000380962 GNG14A0A1W2PPG7 69 aa12.83□□□□□ -0.35
LCMT1-201ENST00000380962 TBX19O60806 448 aa12.83□□□□□ -0.35
LCMT1-201ENST00000380962 FABP3P05413 133 aa12.83□□□□□ -0.35
LCMT1-201ENST00000380962 CXCR2P25025 360 aa12.83□□□□□ -0.35
LCMT1-201ENST00000380962 PTX3P26022 381 aaPredicted RBP12.83□□□□□ -0.35
LCMT1-201ENST00000380962 DNAJA1P31689 397 aaKnown RBP12.83□□□□□ -0.35
LCMT1-201ENST00000380962 OPRD1P41143 372 aa12.83□□□□□ -0.35
LCMT1-201ENST00000380962 GSTM5P46439 218 aa12.83□□□□□ -0.35
LCMT1-201ENST00000380962 MESP2Q0VG99 397 aa12.83□□□□□ -0.35
LCMT1-201ENST00000380962 GRSF1Q12849 480 aaKnown RBP eCLIP12.83□□□□□ -0.35
LCMT1-201ENST00000380962 FADDQ13158 208 aa12.83□□□□□ -0.35
LCMT1-201ENST00000380962 SLC14A1Q13336 389 aa12.83□□□□□ -0.35
LCMT1-201ENST00000380962 ENPP2Q13822 863 aa12.83□□□□□ -0.35
LCMT1-201ENST00000380962 SKIV2LQ15477 1246 aaKnown RBP12.83□□□□□ -0.35
LCMT1-201ENST00000380962 CYP2A13Q16696 494 aa12.83□□□□□ -0.35
LCMT1-201ENST00000380962 PRAMEF14Q5SWL7 426 aa12.83□□□□□ -0.35
LCMT1-201ENST00000380962 BROXQ5VW32 411 aa12.83□□□□□ -0.35
LCMT1-201ENST00000380962 PRAMEF13Q5VWM6 474 aa12.83□□□□□ -0.35
LCMT1-201ENST00000380962 TMEM26Q6ZUK4 368 aa12.83□□□□□ -0.35
LCMT1-201ENST00000380962 COMMD6Q7Z4G1 85 aa12.83□□□□□ -0.35
LCMT1-201ENST00000380962 LRRTM4Q86VH4 590 aa12.83□□□□□ -0.35
LCMT1-201ENST00000380962 AMZ2Q86W34 360 aa12.83□□□□□ -0.35
LCMT1-201ENST00000380962 RNF175Q8N4F7 328 aa12.83□□□□□ -0.35
LCMT1-201ENST00000380962 SETD9Q8NE22 299 aa12.83□□□□□ -0.35
LCMT1-201ENST00000380962 FBLIM1Q8WUP2 373 aa12.83□□□□□ -0.35
LCMT1-201ENST00000380962 FOXJ1Q92949 421 aa12.83□□□□□ -0.35
LCMT1-201ENST00000380962 ZNF566Q969W8 418 aa12.83□□□□□ -0.35
LCMT1-201ENST00000380962 MAGED4Q96JG8 741 aa12.83□□□□□ -0.35
LCMT1-201ENST00000380962 MBOAT4Q96T53 435 aa12.83□□□□□ -0.35
LCMT1-201ENST00000380962 NT5DC2Q9H857 520 aa12.83□□□□□ -0.35
LCMT1-201ENST00000380962 AHSPQ9NZD4 102 aa12.83□□□□□ -0.35
LCMT1-201ENST00000380962 BAG5Q9UL15 447 aa12.83□□□□□ -0.35
LCMT1-201ENST00000380962 TCF20Q9UGU0 1960 aaKnown RBP12.83□□□□□ -0.36
LCMT1-201ENST00000380962 TBC1D3BA6NDS4 549 aa12.83□□□□□ -0.36
LCMT1-201ENST00000380962 OTOL1A6NHN0 477 aaPredicted RBP12.83□□□□□ -0.36
LCMT1-201ENST00000380962 ABCB7O75027 752 aa12.83□□□□□ -0.36
LCMT1-201ENST00000380962 UGT2B11O75310 529 aa12.83□□□□□ -0.36
LCMT1-201ENST00000380962 SEC24DO94855 1032 aaPredicted RBP12.83□□□□□ -0.36
LCMT1-201ENST00000380962 CPSF4O95639 269 aaKnown RBP12.83□□□□□ -0.36
LCMT1-201ENST00000380962 CLIC3O95833 236 aa12.83□□□□□ -0.36
LCMT1-201ENST00000380962 B3GALT4O96024 378 aa12.83□□□□□ -0.36
LCMT1-201ENST00000380962 DCKP27707 260 aa12.83□□□□□ -0.36
LCMT1-201ENST00000380962 SHMT2P34897 504 aa12.83□□□□□ -0.36
LCMT1-201ENST00000380962 ITGA1P56199 1179 aa12.83□□□□□ -0.36
LCMT1-201ENST00000380962 NUP107P57740 925 aa12.83□□□□□ -0.36
LCMT1-201ENST00000380962 KCNAB2Q13303 367 aa12.83□□□□□ -0.36
LCMT1-201ENST00000380962 RUNX3Q13761 415 aa12.83□□□□□ -0.36
LCMT1-201ENST00000380962 STARD3Q14849 445 aa12.83□□□□□ -0.36
LCMT1-201ENST00000380962 RGNQ15493 299 aa12.83□□□□□ -0.36
LCMT1-201ENST00000380962 HKDC1Q2TB90 917 aa12.83□□□□□ -0.36
LCMT1-201ENST00000380962 LRRC23Q53EV4 343 aaPredicted RBP12.83□□□□□ -0.36
LCMT1-201ENST00000380962 PIP5KL1Q5T9C9 394 aa12.83□□□□□ -0.36
LCMT1-201ENST00000380962 FAM71E1Q6IPT2 247 aa12.83□□□□□ -0.36
LCMT1-201ENST00000380962 PNCKQ6P2M8 343 aa12.83□□□□□ -0.36
LCMT1-201ENST00000380962 SPRED2Q7Z698 418 aa12.83□□□□□ -0.36
LCMT1-201ENST00000380962 RBM23Q86U06 439 aaKnown RBP12.83□□□□□ -0.36
LCMT1-201ENST00000380962 TRIM74Q86UV6 250 aa12.83□□□□□ -0.36
LCMT1-201ENST00000380962 DCP2Q8IU60 420 aaKnown RBP12.83□□□□□ -0.36
LCMT1-201ENST00000380962 MMAAQ8IVH4 418 aaKnown RBP12.83□□□□□ -0.36
LCMT1-201ENST00000380962 SLC30A8Q8IWU4 369 aa12.83□□□□□ -0.36
LCMT1-201ENST00000380962 CLECL1Q8IZS7 167 aa12.83□□□□□ -0.36
LCMT1-201ENST00000380962 C12orf76Q8N812 135 aaPredicted RBP12.83□□□□□ -0.36
LCMT1-201ENST00000380962 C11orf65Q8NCR3 313 aa12.83□□□□□ -0.36
LCMT1-201ENST00000380962 ZNF764Q96H86 408 aaPredicted RBP12.83□□□□□ -0.36
LCMT1-201ENST00000380962 ZFYVE19Q96K21 471 aa12.83□□□□□ -0.36
LCMT1-201ENST00000380962 RHBGQ9H310 441 aa12.83□□□□□ -0.36
LCMT1-201ENST00000380962 ADPRHL2Q9NX46 363 aa12.83□□□□□ -0.36
LCMT1-201ENST00000380962 CDH7Q9ULB5 785 aa12.83□□□□□ -0.36
LCMT1-201ENST00000380962 BTBD3Q9Y2F9 522 aa12.83□□□□□ -0.36
LCMT1-201ENST00000380962 COL4A3Q01955 1670 aa12.82□□□□□ -0.36
LCMT1-201ENST00000380962 LOC100130705A0A1B0GUX0 176 aa12.82□□□□□ -0.36
LCMT1-201ENST00000380962 TRIM64BA6NI03 449 aa12.82□□□□□ -0.36
LCMT1-201ENST00000380962 YY2O15391 372 aa12.82□□□□□ -0.36
LCMT1-201ENST00000380962 NOBOXO60393 691 aa12.82□□□□□ -0.36
LCMT1-201ENST00000380962 GPR37L1O60883 481 aa12.82□□□□□ -0.36
LCMT1-201ENST00000380962 KCNJ13O60928 360 aa12.82□□□□□ -0.36
LCMT1-201ENST00000380962 ZNF682O95780 498 aa12.82□□□□□ -0.36
LCMT1-201ENST00000380962 ADH1BP00325 375 aa12.82□□□□□ -0.36
LCMT1-201ENST00000380962 CA3P07451 260 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms