RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 AP3M1Q9Y2T2 418 aa19.05■□□□□ 0.64
PDLIM5-205ENST00000380180 ANKDD1BA6NHY2 528 aa19.05■□□□□ 0.64
PDLIM5-205ENST00000380180 TBX6O95947 436 aaPredicted RBP19.05■□□□□ 0.64
PDLIM5-205ENST00000380180 UMPSP11172 480 aa19.05■□□□□ 0.64
PDLIM5-205ENST00000380180 PKLRP30613 574 aa19.05■□□□□ 0.64
PDLIM5-205ENST00000380180 HNRNPFP52597 415 aaKnown RBP19.05■□□□□ 0.64
PDLIM5-205ENST00000380180 GTF2A1P52655 376 aaPredicted RBP19.05■□□□□ 0.64
PDLIM5-205ENST00000380180 ZNF763Q0D2J5 394 aa19.05■□□□□ 0.64
PDLIM5-205ENST00000380180 LPCAT2Q7L5N7 544 aa19.05■□□□□ 0.64
PDLIM5-205ENST00000380180 ERMP1Q7Z2K6 904 aa19.05■□□□□ 0.64
PDLIM5-205ENST00000380180 OR2A1Q8NGT9 310 aa19.05■□□□□ 0.64
PDLIM5-205ENST00000380180 OR2L8Q8NGY9 312 aa19.05■□□□□ 0.64
PDLIM5-205ENST00000380180 EME1Q96AY2 570 aa19.05■□□□□ 0.64
PDLIM5-205ENST00000380180 ICKQ9UPZ9 632 aa19.05■□□□□ 0.64
PDLIM5-205ENST00000380180 EXO1Q9UQ84 846 aaKnown RBP19.05■□□□□ 0.64
PDLIM5-205ENST00000380180 TDRD6O60522 2096 aaKnown RBP19.05■□□□□ 0.64
PDLIM5-205ENST00000380180 KLHL18O94889 574 aa19.04■□□□□ 0.64
PDLIM5-205ENST00000380180 EML2O95834 649 aa19.04■□□□□ 0.64
PDLIM5-205ENST00000380180 CHRNB1P11230 501 aa19.04■□□□□ 0.64
PDLIM5-205ENST00000380180 HPCAL1P37235 193 aa19.04■□□□□ 0.64
PDLIM5-205ENST00000380180 PRDX1Q06830 199 aaKnown RBP19.04■□□□□ 0.64
PDLIM5-205ENST00000380180 SMAD2Q15796 467 aaKnown RBP19.04■□□□□ 0.64
PDLIM5-205ENST00000380180 MTX3Q5HYI7 312 aa19.04■□□□□ 0.64
PDLIM5-205ENST00000380180 CLECL1Q8IZS7 167 aa19.04■□□□□ 0.64
PDLIM5-205ENST00000380180 C10orf111Q8N326 155 aa19.04■□□□□ 0.64
PDLIM5-205ENST00000380180 TRPV3Q8NET8 790 aa19.04■□□□□ 0.64
PDLIM5-205ENST00000380180 CCL4L1Q8NHW4 92 aa19.04■□□□□ 0.64
PDLIM5-205ENST00000380180 CCDC115Q96NT0 180 aa19.04■□□□□ 0.64
PDLIM5-205ENST00000380180 PRPF18Q99633 342 aaKnown RBP19.04■□□□□ 0.64
PDLIM5-205ENST00000380180 RAB11FIP5Q9BXF6 653 aa19.04■□□□□ 0.64
PDLIM5-205ENST00000380180 C6orf106Q9H6K1 298 aaPredicted RBP19.04■□□□□ 0.64
PDLIM5-205ENST00000380180 ADGRE2Q9UHX3 823 aa19.04■□□□□ 0.64
PDLIM5-205ENST00000380180 ANAPC2Q9UJX6 822 aa19.04■□□□□ 0.64
PDLIM5-205ENST00000380180 ELOVL7A1L3X0 281 aa19.03■□□□□ 0.64
PDLIM5-205ENST00000380180 MAN2B1O00754 1011 aa19.03■□□□□ 0.64
PDLIM5-205ENST00000380180 GSTA4O15217 222 aa19.03■□□□□ 0.64
PDLIM5-205ENST00000380180 CPSF4O95639 269 aaKnown RBP19.03■□□□□ 0.64
PDLIM5-205ENST00000380180 KLK1P06870 262 aa19.03■□□□□ 0.64
PDLIM5-205ENST00000380180 UQCRBP14927 111 aa19.03■□□□□ 0.64
PDLIM5-205ENST00000380180 EFNA1P20827 205 aaPredicted RBP19.03■□□□□ 0.64
PDLIM5-205ENST00000380180 AKT2P31751 481 aa19.03■□□□□ 0.64
PDLIM5-205ENST00000380180 CYP4F2P78329 520 aa19.03■□□□□ 0.64
PDLIM5-205ENST00000380180 REEP5Q00765 189 aa19.03■□□□□ 0.64
PDLIM5-205ENST00000380180 ABRAXAS1Q6UWZ7 409 aa19.03■□□□□ 0.64
PDLIM5-205ENST00000380180 CAMKMTQ7Z624 323 aa19.03■□□□□ 0.64
PDLIM5-205ENST00000380180 TNIP2Q8NFZ5 429 aa19.03■□□□□ 0.64
PDLIM5-205ENST00000380180 COQ8BQ96D53 544 aa19.03■□□□□ 0.64
PDLIM5-205ENST00000380180 SH3BP4Q9P0V3 963 aa19.03■□□□□ 0.64
PDLIM5-205ENST00000380180 C10orf142B7Z368 130 aa19.03■□□□□ 0.64
PDLIM5-205ENST00000380180 TPST1O60507 370 aa19.03■□□□□ 0.64
PDLIM5-205ENST00000380180 GMNNO75496 209 aa19.03■□□□□ 0.64
PDLIM5-205ENST00000380180 ANXA6P08133 673 aa19.03■□□□□ 0.64
PDLIM5-205ENST00000380180 GZMMP51124 257 aa19.03■□□□□ 0.64
PDLIM5-205ENST00000380180 DGKEP52429 567 aa19.03■□□□□ 0.64
PDLIM5-205ENST00000380180 CSNK1G2P78368 415 aa19.03■□□□□ 0.64
PDLIM5-205ENST00000380180 ZNF852Q6ZMS4 543 aa19.03■□□□□ 0.64
PDLIM5-205ENST00000380180 ZNF621Q6ZSS3 439 aa19.03■□□□□ 0.64
PDLIM5-205ENST00000380180 SLC9B2Q86UD5 537 aa19.03■□□□□ 0.64
PDLIM5-205ENST00000380180 CALHM3Q86XJ0 350 aa19.03■□□□□ 0.64
PDLIM5-205ENST00000380180 GALNT4Q8N4A0 578 aa19.03■□□□□ 0.64
PDLIM5-205ENST00000380180 C16orf78Q8WTQ4 265 aa19.03■□□□□ 0.64
PDLIM5-205ENST00000380180 SNX19Q92543 992 aa19.03■□□□□ 0.64
PDLIM5-205ENST00000380180 FIG4Q92562 907 aa19.03■□□□□ 0.64
PDLIM5-205ENST00000380180 FAM120BQ96EK7 910 aaKnown RBP19.03■□□□□ 0.64
PDLIM5-205ENST00000380180 SEPHS2Q99611 448 aa19.03■□□□□ 0.64
PDLIM5-205ENST00000380180 TMEM168Q9H0V1 697 aa19.03■□□□□ 0.64
PDLIM5-205ENST00000380180 NT5DC2Q9H857 520 aa19.03■□□□□ 0.64
PDLIM5-205ENST00000380180 GORASP2Q9H8Y8 452 aa19.03■□□□□ 0.64
PDLIM5-205ENST00000380180 CYP8B1Q9UNU6 501 aa19.03■□□□□ 0.64
PDLIM5-205ENST00000380180 PCDHB11Q9Y5F2 797 aa19.03■□□□□ 0.64
PDLIM5-205ENST00000380180 HEBP2Q9Y5Z4 205 aa19.03■□□□□ 0.64
PDLIM5-205ENST00000380180 HS3ST3A1Q9Y663 406 aa19.03■□□□□ 0.64
PDLIM5-205ENST00000380180 COLEC10Q9Y6Z7 277 aa19.03■□□□□ 0.64
PDLIM5-205ENST00000380180 GON4LQ3T8J9 2241 aa19.02■□□□□ 0.64
PDLIM5-205ENST00000380180 IGKV1-8A0A0C4DH67 115 aa19.02■□□□□ 0.64
PDLIM5-205ENST00000380180 EIF4E1BA6NMX2 242 aaKnown RBP19.02■□□□□ 0.64
PDLIM5-205ENST00000380180 SOX1O00570 391 aaPredicted RBP19.02■□□□□ 0.64
PDLIM5-205ENST00000380180 TNFRSF10CO14798 259 aa19.02■□□□□ 0.64
PDLIM5-205ENST00000380180 C1QCP02747 245 aa19.02■□□□□ 0.64
PDLIM5-205ENST00000380180 BMP2P12643 396 aa19.02■□□□□ 0.64
PDLIM5-205ENST00000380180 ZNF26P17031 533 aaPredicted RBP19.02■□□□□ 0.64
PDLIM5-205ENST00000380180 POLE2P56282 527 aa19.02■□□□□ 0.64
PDLIM5-205ENST00000380180 YPEL5P62699 121 aa19.02■□□□□ 0.64
PDLIM5-205ENST00000380180 DEPDC1Q5TB30 811 aa19.02■□□□□ 0.64
PDLIM5-205ENST00000380180 IRGCQ6NXR0 463 aa19.02■□□□□ 0.64
PDLIM5-205ENST00000380180 Q6ZSR6 202 aa19.02■□□□□ 0.64
PDLIM5-205ENST00000380180 TMEM145Q8NBT3 493 aa19.02■□□□□ 0.64
PDLIM5-205ENST00000380180 PAPD5Q8NDF8 572 aaKnown RBP19.02■□□□□ 0.64
PDLIM5-205ENST00000380180 BTBD9Q96Q07 612 aa19.02■□□□□ 0.64
PDLIM5-205ENST00000380180 SORBS1Q9BX66 1292 aaKnown RBP19.02■□□□□ 0.64
PDLIM5-205ENST00000380180 PITHD1Q9GZP4 211 aaPredicted RBP19.02■□□□□ 0.64
PDLIM5-205ENST00000380180 REEP4Q9H6H4 257 aa19.02■□□□□ 0.64
PDLIM5-205ENST00000380180 COQ10BQ9H8M1 238 aa19.02■□□□□ 0.64
PDLIM5-205ENST00000380180 AGPAT4Q9NRZ5 378 aa19.02■□□□□ 0.64
PDLIM5-205ENST00000380180 C2orf42Q9NWW7 574 aa19.02■□□□□ 0.64
PDLIM5-205ENST00000380180 ATP6V1HQ9UI12 483 aa19.02■□□□□ 0.64
PDLIM5-205ENST00000380180 CNOT11Q9UKZ1 510 aaKnown RBP19.02■□□□□ 0.64
PDLIM5-205ENST00000380180 AK5Q9Y6K8 562 aa19.02■□□□□ 0.64
PDLIM5-205ENST00000380180 V9GYQ6 96 aa19.02■□□□□ 0.64
PDLIM5-205ENST00000380180 OR1F1O43749 312 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms