RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 HERC2P3Q9BVR0 1158 aa13.7□□□□□ -0.22
TRIM13-202ENST00000378182 B4GALT7Q9UBV7 327 aa13.7□□□□□ -0.22
TRIM13-202ENST00000378182 HCN4Q9Y3Q4 1203 aa13.7□□□□□ -0.22
TRIM13-202ENST00000378182 INSL5Q9Y5Q6 135 aa13.7□□□□□ -0.22
TRIM13-202ENST00000378182 PRORSD1PA6NEY8 169 aa13.7□□□□□ -0.22
TRIM13-202ENST00000378182 C2orf74A8MZ97 194 aa13.7□□□□□ -0.22
TRIM13-202ENST00000378182 ADAMTS3O15072 1205 aa13.7□□□□□ -0.22
TRIM13-202ENST00000378182 MAFKO60675 156 aa13.7□□□□□ -0.22
TRIM13-202ENST00000378182 GABRA3P34903 492 aa13.7□□□□□ -0.22
TRIM13-202ENST00000378182 OR4D2P58180 307 aa13.7□□□□□ -0.22
TRIM13-202ENST00000378182 DPYSQ14117 519 aa13.7□□□□□ -0.22
TRIM13-202ENST00000378182 IRF2BP2Q7Z5L9 587 aa13.7□□□□□ -0.22
TRIM13-202ENST00000378182 C17orf62Q9BQA9 187 aa13.7□□□□□ -0.22
TRIM13-202ENST00000378182 ADAMTS13Q76LX8 1427 aa13.7□□□□□ -0.22
TRIM13-202ENST00000378182 TEX13DA0A0J9YY54 714 aaPredicted RBP13.69□□□□□ -0.22
TRIM13-202ENST00000378182 KDM4FA0A1W2PPD8 638 aa13.69□□□□□ -0.22
TRIM13-202ENST00000378182 AIREO43918 545 aa13.69□□□□□ -0.22
TRIM13-202ENST00000378182 RHOP08100 348 aa13.69□□□□□ -0.22
TRIM13-202ENST00000378182 PXNP49023 591 aaPredicted RBP13.69□□□□□ -0.22
TRIM13-202ENST00000378182 STK11Q15831 433 aa13.69□□□□□ -0.22
TRIM13-202ENST00000378182 SNX29P2Q8IUI4 249 aa13.69□□□□□ -0.22
TRIM13-202ENST00000378182 LRRC20Q8TCA0 184 aa13.69□□□□□ -0.22
TRIM13-202ENST00000378182 FBRSL1Q9HCM7 1045 aaKnown RBP13.69□□□□□ -0.22
TRIM13-202ENST00000378182 RHCGQ9UBD6 479 aa13.69□□□□□ -0.22
TRIM13-202ENST00000378182 POFUT2Q9Y2G5 429 aa13.69□□□□□ -0.22
TRIM13-202ENST00000378182 SLC16A5O15375 505 aa13.69□□□□□ -0.22
TRIM13-202ENST00000378182 HCRTO43612 131 aa13.69□□□□□ -0.22
TRIM13-202ENST00000378182 CNTN5O94779 1100 aa13.69□□□□□ -0.22
TRIM13-202ENST00000378182 IFNA21P01568 189 aa13.69□□□□□ -0.22
TRIM13-202ENST00000378182 PRKCIP41743 596 aa13.69□□□□□ -0.22
TRIM13-202ENST00000378182 CASP7P55210 303 aa13.69□□□□□ -0.22
TRIM13-202ENST00000378182 BRAT1Q6PJG6 821 aa13.69□□□□□ -0.22
TRIM13-202ENST00000378182 TXNDC5Q8NBS9 432 aaKnown RBP13.69□□□□□ -0.22
TRIM13-202ENST00000378182 PGM2Q96G03 612 aa13.69□□□□□ -0.22
TRIM13-202ENST00000378182 HAPLN3Q96S86 360 aa13.69□□□□□ -0.22
TRIM13-202ENST00000378182 TRMOQ9BU70 441 aa13.69□□□□□ -0.22
TRIM13-202ENST00000378182 POLR2J3Q9H1A7 115 aaKnown RBP13.69□□□□□ -0.22
TRIM13-202ENST00000378182 RNF39Q9H2S5 420 aa13.69□□□□□ -0.22
TRIM13-202ENST00000378182 OR51B5Q9H339 312 aa13.69□□□□□ -0.22
TRIM13-202ENST00000378182 PCDHB14Q9Y5E9 798 aa13.69□□□□□ -0.22
TRIM13-202ENST00000378182 KDM4BO94953 1096 aa13.69□□□□□ -0.22
TRIM13-202ENST00000378182 TGDSO95455 350 aa13.69□□□□□ -0.22
TRIM13-202ENST00000378182 CSF2P04141 144 aa13.69□□□□□ -0.22
TRIM13-202ENST00000378182 ITIH1P19827 911 aa13.69□□□□□ -0.22
TRIM13-202ENST00000378182 GDF5P43026 501 aa13.69□□□□□ -0.22
TRIM13-202ENST00000378182 IDH3AP50213 366 aa13.69□□□□□ -0.22
TRIM13-202ENST00000378182 CA9Q16790 459 aa13.69□□□□□ -0.22
TRIM13-202ENST00000378182 KLHL22Q53GT1 634 aa13.69□□□□□ -0.22
TRIM13-202ENST00000378182 OR4F3Q6IEY1 312 aa13.69□□□□□ -0.22
TRIM13-202ENST00000378182 CLEC20AQ6ZU45 233 aa13.69□□□□□ -0.22
TRIM13-202ENST00000378182 GALNT10Q86SR1 603 aa13.69□□□□□ -0.22
TRIM13-202ENST00000378182 SPRYD4Q8WW59 207 aaPredicted RBP13.69□□□□□ -0.22
TRIM13-202ENST00000378182 ZNF514Q96K75 400 aaPredicted RBP13.69□□□□□ -0.22
TRIM13-202ENST00000378182 ZNF347Q96SE7 839 aa13.69□□□□□ -0.22
TRIM13-202ENST00000378182 TMEM175Q9BSA9 504 aa13.69□□□□□ -0.22
TRIM13-202ENST00000378182 RNGTTO60942 597 aaKnown RBP13.69□□□□□ -0.22
TRIM13-202ENST00000378182 FARS2O95363 451 aaKnown RBP13.69□□□□□ -0.22
TRIM13-202ENST00000378182 SOX14O95416 240 aa13.69□□□□□ -0.22
TRIM13-202ENST00000378182 VAMP1P23763 118 aa13.69□□□□□ -0.22
TRIM13-202ENST00000378182 ZNF84P51523 738 aa13.69□□□□□ -0.22
TRIM13-202ENST00000378182 PMS2P3Q13401 168 aa13.69□□□□□ -0.22
TRIM13-202ENST00000378182 PSKH2Q96QS6 385 aa13.69□□□□□ -0.22
TRIM13-202ENST00000378182 WDR12Q9GZL7 423 aaKnown RBP13.69□□□□□ -0.22
TRIM13-202ENST00000378182 LMTK2Q8IWU2 1503 aa13.69□□□□□ -0.22
TRIM13-202ENST00000378182 TIGD6Q17RP2 521 aa13.69□□□□□ -0.22
TRIM13-202ENST00000378182 RCOR3Q9P2K3 495 aaPredicted RBP13.69□□□□□ -0.22
TRIM13-202ENST00000378182 M0R129 80 aa13.69□□□□□ -0.22
TRIM13-202ENST00000378182 TSHRP16473 764 aa13.69□□□□□ -0.22
TRIM13-202ENST00000378182 HTR7P34969 479 aa13.69□□□□□ -0.22
TRIM13-202ENST00000378182 UBE2NP61088 152 aaKnown RBP13.69□□□□□ -0.22
TRIM13-202ENST00000378182 ARG2P78540 354 aa13.69□□□□□ -0.22
TRIM13-202ENST00000378182 DPY19L4Q7Z388 723 aa13.69□□□□□ -0.22
TRIM13-202ENST00000378182 ZNF709Q8N972 641 aa13.69□□□□□ -0.22
TRIM13-202ENST00000378182 DEFB126Q9BYW3 111 aa13.69□□□□□ -0.22
TRIM13-202ENST00000378182 SMURF2Q9HAU4 748 aa13.69□□□□□ -0.22
TRIM13-202ENST00000378182 MYO9BQ13459 2157 aa13.69□□□□□ -0.22
TRIM13-202ENST00000378182 AHSA1O95433 338 aa13.68□□□□□ -0.22
TRIM13-202ENST00000378182 ASPAP45381 313 aa13.68□□□□□ -0.22
TRIM13-202ENST00000378182 RAB43Q86YS6 212 aa13.68□□□□□ -0.22
TRIM13-202ENST00000378182 AURKAO14965 403 aa13.68□□□□□ -0.22
TRIM13-202ENST00000378182 CCNKO75909 580 aa13.68□□□□□ -0.22
TRIM13-202ENST00000378182 GALTP07902 379 aa13.68□□□□□ -0.22
TRIM13-202ENST00000378182 BCKDHAP12694 445 aa13.68□□□□□ -0.22
TRIM13-202ENST00000378182 MAGEA2P43356 314 aa13.68□□□□□ -0.22
TRIM13-202ENST00000378182 RFTN1Q14699 578 aaPredicted RBP13.68□□□□□ -0.22
TRIM13-202ENST00000378182 KANSL1Q7Z3B3 1105 aa13.68□□□□□ -0.22
TRIM13-202ENST00000378182 CCDC116Q8IYX3 515 aa13.68□□□□□ -0.22
TRIM13-202ENST00000378182 TBC1D15Q8TC07 691 aa13.68□□□□□ -0.22
TRIM13-202ENST00000378182 CLEC4DQ8WXI8 215 aa13.68□□□□□ -0.22
TRIM13-202ENST00000378182 CAPN8A6NHC0 703 aa13.68□□□□□ -0.22
TRIM13-202ENST00000378182 KLRC4O43908 158 aa13.68□□□□□ -0.22
TRIM13-202ENST00000378182 PRPS2P11908 318 aa13.68□□□□□ -0.22
TRIM13-202ENST00000378182 GNG2P59768 71 aa13.68□□□□□ -0.22
TRIM13-202ENST00000378182 HINT2Q9BX68 163 aa13.68□□□□□ -0.22
TRIM13-202ENST00000378182 TMEM168Q9H0V1 697 aa13.68□□□□□ -0.22
TRIM13-202ENST00000378182 ZNF701Q9NV72 531 aaPredicted RBP13.68□□□□□ -0.22
TRIM13-202ENST00000378182 WNT7AO00755 349 aa13.68□□□□□ -0.22
TRIM13-202ENST00000378182 GRPRP30550 384 aa13.68□□□□□ -0.22
TRIM13-202ENST00000378182 LASP1Q14847 261 aaKnown RBP13.68□□□□□ -0.22
TRIM13-202ENST00000378182 LRRC55Q6ZSA7 311 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms