RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 PHF21AQ96BD5 680 aa14□□□□□ -0.17
TCOF1-202ENST00000377797 SLC2A4RGQ9NR83 387 aa14□□□□□ -0.17
TCOF1-202ENST00000377797 DNAAF2Q9NVR5 837 aaKnown RBP14□□□□□ -0.17
TCOF1-202ENST00000377797 DKK3Q9UBP4 350 aa14□□□□□ -0.17
TCOF1-202ENST00000377797 TTC3P53804 2025 aa14□□□□□ -0.17
TCOF1-202ENST00000377797 EEDO75530 441 aaKnown RBP14□□□□□ -0.17
TCOF1-202ENST00000377797 GADD45GO95257 159 aa14□□□□□ -0.17
TCOF1-202ENST00000377797 ANGPTL1O95841 491 aa14□□□□□ -0.17
TCOF1-202ENST00000377797 KHKP50053 298 aa14□□□□□ -0.17
TCOF1-202ENST00000377797 MERTKQ12866 999 aa14□□□□□ -0.17
TCOF1-202ENST00000377797 OR5AR1Q8NGP9 310 aa14□□□□□ -0.17
TCOF1-202ENST00000377797 GTPBP3Q969Y2 492 aaKnown RBP14□□□□□ -0.17
TCOF1-202ENST00000377797 F2RL3Q96RI0 385 aa14□□□□□ -0.17
TCOF1-202ENST00000377797 DPH7Q9BTV6 452 aa14□□□□□ -0.17
TCOF1-202ENST00000377797 RTCAO00442 366 aaKnown RBP14□□□□□ -0.17
TCOF1-202ENST00000377797 ZBTB11O95625 1053 aaPredicted RBP14□□□□□ -0.17
TCOF1-202ENST00000377797 RYKP34925 604 aa14□□□□□ -0.17
TCOF1-202ENST00000377797 PIK3CBP42338 1070 aa14□□□□□ -0.17
TCOF1-202ENST00000377797 KCNC1P48547 511 aa14□□□□□ -0.17
TCOF1-202ENST00000377797 CCNIQ14094 377 aa14□□□□□ -0.17
TCOF1-202ENST00000377797 AAK1Q2M2I8 961 aa14□□□□□ -0.17
TCOF1-202ENST00000377797 UNC5DQ6UXZ4 953 aa14□□□□□ -0.17
TCOF1-202ENST00000377797 EPHX4Q8IUS5 362 aa14□□□□□ -0.17
TCOF1-202ENST00000377797 LSMEM2Q8N112 164 aa14□□□□□ -0.17
TCOF1-202ENST00000377797 PDPRQ8NCN5 879 aa14□□□□□ -0.17
TCOF1-202ENST00000377797 SLC38A4Q969I6 547 aa14□□□□□ -0.17
TCOF1-202ENST00000377797 ARMC5Q96C12 935 aa14□□□□□ -0.17
TCOF1-202ENST00000377797 MVB12BQ9H7P6 319 aa14□□□□□ -0.17
TCOF1-202ENST00000377797 CCNB1IP1Q9NPC3 277 aa14□□□□□ -0.17
TCOF1-202ENST00000377797 TPST2O60704 377 aa14□□□□□ -0.17
TCOF1-202ENST00000377797 MATN4O95460 622 aa14□□□□□ -0.17
TCOF1-202ENST00000377797 C8orf89P0DMQ9 161 aa14□□□□□ -0.17
TCOF1-202ENST00000377797 IL7RP16871 459 aa14□□□□□ -0.17
TCOF1-202ENST00000377797 DHPSP49366 369 aaPredicted RBP14□□□□□ -0.17
TCOF1-202ENST00000377797 BIKQ13323 160 aa14□□□□□ -0.17
TCOF1-202ENST00000377797 OR8J3Q8NGG0 315 aa14□□□□□ -0.17
TCOF1-202ENST00000377797 LKAAEAR1Q8TD35 194 aa14□□□□□ -0.17
TCOF1-202ENST00000377797 LMX1AQ8TE12 382 aa14□□□□□ -0.17
TCOF1-202ENST00000377797 PAIP1Q9H074 479 aaKnown RBP14□□□□□ -0.17
TCOF1-202ENST00000377797 NEUROD4Q9HD90 331 aa14□□□□□ -0.17
TCOF1-202ENST00000377797 CD207Q9UJ71 328 aa14□□□□□ -0.17
TCOF1-202ENST00000377797 SOBPA7XYQ1 873 aa13.99□□□□□ -0.17
TCOF1-202ENST00000377797 H3BNC9 293 aa13.99□□□□□ -0.17
TCOF1-202ENST00000377797 OR6A2O95222 327 aa13.99□□□□□ -0.17
TCOF1-202ENST00000377797 FEN1P39748 380 aaKnown RBP13.99□□□□□ -0.17
TCOF1-202ENST00000377797 LIN52Q52LA3 116 aa13.99□□□□□ -0.17
TCOF1-202ENST00000377797 SFT2D3Q587I9 215 aa13.99□□□□□ -0.17
TCOF1-202ENST00000377797 ABHD13Q7L211 337 aa13.99□□□□□ -0.17
TCOF1-202ENST00000377797 DPP10Q8N608 796 aa13.99□□□□□ -0.17
TCOF1-202ENST00000377797 RASGEF1AQ8N9B8 481 aa13.99□□□□□ -0.17
TCOF1-202ENST00000377797 FAM3CQ92520 227 aa13.99□□□□□ -0.17
TCOF1-202ENST00000377797 DDX28Q9NUL7 540 aaKnown RBP13.99□□□□□ -0.17
TCOF1-202ENST00000377797 DIRAS1O95057 198 aa13.99□□□□□ -0.17
TCOF1-202ENST00000377797 GNSP15586 552 aa13.99□□□□□ -0.17
TCOF1-202ENST00000377797 PDHA2P29803 388 aa13.99□□□□□ -0.17
TCOF1-202ENST00000377797 CDK9P50750 372 aaKnown RBP13.99□□□□□ -0.17
TCOF1-202ENST00000377797 SPATS1Q496A3 300 aa13.99□□□□□ -0.17
TCOF1-202ENST00000377797 COX18Q8N8Q8 333 aa13.99□□□□□ -0.17
TCOF1-202ENST00000377797 OR7G3Q8NG95 312 aa13.99□□□□□ -0.17
TCOF1-202ENST00000377797 ASB11Q8WXH4 323 aa13.99□□□□□ -0.17
TCOF1-202ENST00000377797 FBRSQ9HAH7 460 aa13.99□□□□□ -0.17
TCOF1-202ENST00000377797 ZC4H2Q9NQZ6 224 aa13.99□□□□□ -0.17
TCOF1-202ENST00000377797 ERGIC3Q9Y282 383 aa13.99□□□□□ -0.17
TCOF1-202ENST00000377797 PLXNB2O15031 1838 aa13.99□□□□□ -0.17
TCOF1-202ENST00000377797 RGPD3A6NKT7 1758 aaPredicted RBP13.99□□□□□ -0.17
TCOF1-202ENST00000377797 RGPD4Q7Z3J3 1758 aa13.99□□□□□ -0.17
TCOF1-202ENST00000377797 A0A096LPI6 279 aa13.99□□□□□ -0.17
TCOF1-202ENST00000377797 H3BNH8 94 aa13.99□□□□□ -0.17
TCOF1-202ENST00000377797 NDUFB5O43674 189 aa13.99□□□□□ -0.17
TCOF1-202ENST00000377797 BCHEP06276 602 aa13.99□□□□□ -0.17
TCOF1-202ENST00000377797 TSPAN19P0C672 248 aa13.99□□□□□ -0.17
TCOF1-202ENST00000377797 CD247P20963 164 aa13.99□□□□□ -0.17
TCOF1-202ENST00000377797 ITPKBP27987 946 aa13.99□□□□□ -0.17
TCOF1-202ENST00000377797 RPL4P36578 427 aaKnown RBP13.99□□□□□ -0.17
TCOF1-202ENST00000377797 CCR2P41597 374 aa13.99□□□□□ -0.17
TCOF1-202ENST00000377797 CCT3P49368 545 aaKnown RBP13.99□□□□□ -0.17
TCOF1-202ENST00000377797 RAB28P51157 221 aa13.99□□□□□ -0.17
TCOF1-202ENST00000377797 CLCN7P51798 805 aa13.99□□□□□ -0.17
TCOF1-202ENST00000377797 NR1D2Q14995 579 aa13.99□□□□□ -0.17
TCOF1-202ENST00000377797 ZNF77Q15935 545 aa13.99□□□□□ -0.17
TCOF1-202ENST00000377797 OGFOD2Q6N063 350 aa13.99□□□□□ -0.17
TCOF1-202ENST00000377797 SMYD1Q8NB12 490 aa13.99□□□□□ -0.17
TCOF1-202ENST00000377797 KCT2Q8NC54 265 aa13.99□□□□□ -0.17
TCOF1-202ENST00000377797 GPR151Q8TDV0 419 aa13.99□□□□□ -0.17
TCOF1-202ENST00000377797 APIPQ96GX9 242 aa13.99□□□□□ -0.17
TCOF1-202ENST00000377797 BIRC8Q96P09 236 aa13.99□□□□□ -0.17
TCOF1-202ENST00000377797 MAP1BP46821 2468 aaKnown RBP13.99□□□□□ -0.17
TCOF1-202ENST00000377797 MAN2B1O00754 1011 aa13.99□□□□□ -0.17
TCOF1-202ENST00000377797 ASGR2P07307 311 aa13.99□□□□□ -0.17
TCOF1-202ENST00000377797 IL3P08700 152 aa13.99□□□□□ -0.17
TCOF1-202ENST00000377797 DRD1P21728 446 aa13.99□□□□□ -0.17
TCOF1-202ENST00000377797 CD9P21926 228 aa13.99□□□□□ -0.17
TCOF1-202ENST00000377797 DEFA1P59665 94 aa13.99□□□□□ -0.17
TCOF1-202ENST00000377797 DEFA3P59666 94 aa13.99□□□□□ -0.17
TCOF1-202ENST00000377797 PIGGQ5H8A4 983 aa13.99□□□□□ -0.17
TCOF1-202ENST00000377797 OR2T5Q6IEZ7 315 aa13.99□□□□□ -0.17
TCOF1-202ENST00000377797 HACD2Q6Y1H2 254 aa13.99□□□□□ -0.17
TCOF1-202ENST00000377797 VN1R5Q7Z5H4 357 aa13.99□□□□□ -0.17
TCOF1-202ENST00000377797 PEX5LQ8IYB4 626 aa13.99□□□□□ -0.17
TCOF1-202ENST00000377797 PARP8Q8N3A8 854 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms