RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 FMO3P31513 532 aa13.21□□□□□ -0.3
GPC6-201ENST00000377047 GMFBP60983 142 aa13.21□□□□□ -0.3
GPC6-201ENST00000377047 RING1Q06587 406 aa13.21□□□□□ -0.3
GPC6-201ENST00000377047 ELOAQ14241 798 aaKnown RBP13.21□□□□□ -0.3
GPC6-201ENST00000377047 DSC3Q14574 896 aa13.21□□□□□ -0.3
GPC6-201ENST00000377047 IQCCQ4KMZ1 466 aa13.21□□□□□ -0.3
GPC6-201ENST00000377047 SH3YL1Q96HL8 342 aaPredicted RBP13.21□□□□□ -0.3
GPC6-201ENST00000377047 KCNA7Q96RP8 456 aa13.21□□□□□ -0.3
GPC6-201ENST00000377047 EIF1AYO14602 144 aaKnown RBP13.2□□□□□ -0.3
GPC6-201ENST00000377047 CDK6Q00534 326 aa13.2□□□□□ -0.3
GPC6-201ENST00000377047 HSF2Q03933 536 aa13.2□□□□□ -0.3
GPC6-201ENST00000377047 TGFBIQ15582 683 aa13.2□□□□□ -0.3
GPC6-201ENST00000377047 EZH1Q92800 747 aaPredicted RBP13.2□□□□□ -0.3
GPC6-201ENST00000377047 KIAA1191Q96A73 305 aa13.2□□□□□ -0.3
GPC6-201ENST00000377047 PHF12Q96QT6 1004 aa13.2□□□□□ -0.3
GPC6-201ENST00000377047 CGREF1Q99674 301 aa13.2□□□□□ -0.3
GPC6-201ENST00000377047 COQ10BQ9H8M1 238 aa13.2□□□□□ -0.3
GPC6-201ENST00000377047 MAGEE1Q9HCI5 957 aa13.2□□□□□ -0.3
GPC6-201ENST00000377047 APOBEC3BQ9UH17 382 aaKnown RBP13.2□□□□□ -0.3
GPC6-201ENST00000377047 COMMD3-BMI1R4GMX3 469 aa13.2□□□□□ -0.3
GPC6-201ENST00000377047 VEGFDO43915 354 aa13.2□□□□□ -0.3
GPC6-201ENST00000377047 ZNF623O75123 536 aa13.2□□□□□ -0.3
GPC6-201ENST00000377047 TACSTD2P09758 323 aa13.2□□□□□ -0.3
GPC6-201ENST00000377047 ALDH3A2P51648 485 aa13.2□□□□□ -0.3
GPC6-201ENST00000377047 RAB2AP61019 212 aa13.2□□□□□ -0.3
GPC6-201ENST00000377047 CBFBQ13951 182 aa13.2□□□□□ -0.3
GPC6-201ENST00000377047 MSS51Q4VC12 460 aa13.2□□□□□ -0.3
GPC6-201ENST00000377047 QSOX2Q6ZRP7 698 aa13.2□□□□□ -0.3
GPC6-201ENST00000377047 C7orf43Q8WVR3 580 aa13.2□□□□□ -0.3
GPC6-201ENST00000377047 FBLP22087 321 aaKnown RBP13.2□□□□□ -0.3
GPC6-201ENST00000377047 FOXN2P32314 431 aa13.2□□□□□ -0.3
GPC6-201ENST00000377047 RIN1Q13671 783 aa13.2□□□□□ -0.3
GPC6-201ENST00000377047 KCNC3Q14003 757 aa13.2□□□□□ -0.3
GPC6-201ENST00000377047 FAM214AQ32MH5 1076 aa13.2□□□□□ -0.3
GPC6-201ENST00000377047 CEP97Q8IW35 865 aa13.2□□□□□ -0.3
GPC6-201ENST00000377047 OR6N1Q8NGY5 312 aa13.2□□□□□ -0.3
GPC6-201ENST00000377047 COPS4Q9BT78 406 aa13.2□□□□□ -0.3
GPC6-201ENST00000377047 B3GNT4Q9C0J1 378 aa13.2□□□□□ -0.3
GPC6-201ENST00000377047 CST11Q9H112 138 aa13.2□□□□□ -0.3
GPC6-201ENST00000377047 MBD2Q9UBB5 411 aa13.2□□□□□ -0.3
GPC6-201ENST00000377047 TEX264Q9Y6I9 313 aa13.2□□□□□ -0.3
GPC6-201ENST00000377047 WASF2Q9Y6W5 498 aa13.2□□□□□ -0.3
GPC6-201ENST00000377047 TRMUO75648 421 aaKnown RBP13.2□□□□□ -0.3
GPC6-201ENST00000377047 RPP14O95059 124 aaKnown RBP13.2□□□□□ -0.3
GPC6-201ENST00000377047 HMGN1P05114 100 aa13.2□□□□□ -0.3
GPC6-201ENST00000377047 ANXA8P13928 327 aa13.2□□□□□ -0.3
GPC6-201ENST00000377047 EEFSECP57772 596 aaKnown RBP13.2□□□□□ -0.3
GPC6-201ENST00000377047 C5orf22Q49AR2 442 aa13.2□□□□□ -0.3
GPC6-201ENST00000377047 ARHGAP22Q7Z5H3 698 aa13.2□□□□□ -0.3
GPC6-201ENST00000377047 P2RY8Q86VZ1 359 aa13.2□□□□□ -0.3
GPC6-201ENST00000377047 GLIS1Q8NBF1 620 aa13.2□□□□□ -0.3
GPC6-201ENST00000377047 LRIG1Q96JA1 1093 aa13.2□□□□□ -0.3
GPC6-201ENST00000377047 OR52B2Q96RD2 323 aa13.2□□□□□ -0.3
GPC6-201ENST00000377047 CADM1Q9BY67 442 aaKnown RBP13.2□□□□□ -0.3
GPC6-201ENST00000377047 DENND2DQ9H6A0 471 aaPredicted RBP13.2□□□□□ -0.3
GPC6-201ENST00000377047 PDE7BQ9NP56 450 aa13.2□□□□□ -0.3
GPC6-201ENST00000377047 SUSD2Q9UGT4 822 aa13.2□□□□□ -0.3
GPC6-201ENST00000377047 POMPQ9Y244 141 aa13.2□□□□□ -0.3
GPC6-201ENST00000377047 RPL36Q9Y3U8 105 aaKnown RBP13.2□□□□□ -0.3
GPC6-201ENST00000377047 BACE2Q9Y5Z0 518 aa13.2□□□□□ -0.3
GPC6-201ENST00000377047 AP3S2P59780 193 aa13.2□□□□□ -0.3
GPC6-201ENST00000377047 LINGO2Q7L985 606 aa13.2□□□□□ -0.3
GPC6-201ENST00000377047 KLHL36Q8N4N3 616 aa13.2□□□□□ -0.3
GPC6-201ENST00000377047 BLOC1S5-TXNDC5H3BN57 136 aa13.2□□□□□ -0.3
GPC6-201ENST00000377047 G6PDP11413 515 aa13.2□□□□□ -0.3
GPC6-201ENST00000377047 ACRV1P26436 265 aa13.2□□□□□ -0.3
GPC6-201ENST00000377047 PDHA2P29803 388 aa13.2□□□□□ -0.3
GPC6-201ENST00000377047 LASP1Q14847 261 aaKnown RBP13.2□□□□□ -0.3
GPC6-201ENST00000377047 NOXRED1Q6NXP6 359 aa13.2□□□□□ -0.3
GPC6-201ENST00000377047 ZNF627Q7L945 461 aa13.2□□□□□ -0.3
GPC6-201ENST00000377047 SLC2A13Q96QE2 648 aa13.2□□□□□ -0.3
GPC6-201ENST00000377047 ZNF717Q9BY31 904 aaPredicted RBP13.2□□□□□ -0.3
GPC6-201ENST00000377047 XYLT2Q9H1B5 865 aa13.2□□□□□ -0.3
GPC6-201ENST00000377047 PCDHGA2Q9Y5H1 932 aa13.2□□□□□ -0.3
GPC6-201ENST00000377047 A0A0X1KG70 313 aa13.19□□□□□ -0.3
GPC6-201ENST00000377047 FAM170BA6NMN3 283 aa13.19□□□□□ -0.3
GPC6-201ENST00000377047 E7ENX8 843 aa13.19□□□□□ -0.3
GPC6-201ENST00000377047 CBLP22681 906 aa13.19□□□□□ -0.3
GPC6-201ENST00000377047 EDNRAP25101 427 aa13.19□□□□□ -0.3
GPC6-201ENST00000377047 NTSR1P30989 418 aa13.19□□□□□ -0.3
GPC6-201ENST00000377047 GPX6P59796 221 aa13.19□□□□□ -0.3
GPC6-201ENST00000377047 DMPKQ09013 629 aa13.19□□□□□ -0.3
GPC6-201ENST00000377047 CST6Q15828 149 aa13.19□□□□□ -0.3
GPC6-201ENST00000377047 SLCO2A1Q92959 643 aa13.19□□□□□ -0.3
GPC6-201ENST00000377047 SLC39A3Q9BRY0 314 aa13.19□□□□□ -0.3
GPC6-201ENST00000377047 DLGAP4Q9Y2H0 992 aa13.19□□□□□ -0.3
GPC6-201ENST00000377047 FUT4P22083 530 aa13.19□□□□□ -0.3
GPC6-201ENST00000377047 EDNRBP24530 442 aa13.19□□□□□ -0.3
GPC6-201ENST00000377047 AGTR2P50052 363 aa13.19□□□□□ -0.3
GPC6-201ENST00000377047 ELAVL3Q14576 367 aaKnown RBP13.19□□□□□ -0.3
GPC6-201ENST00000377047 ACSBG2Q5FVE4 666 aa13.19□□□□□ -0.3
GPC6-201ENST00000377047 PGBD2Q6P3X8 592 aa13.19□□□□□ -0.3
GPC6-201ENST00000377047 PNLDC1Q8NA58 520 aaKnown RBP13.19□□□□□ -0.3
GPC6-201ENST00000377047 INMTO95050 263 aa13.19□□□□□ -0.3
GPC6-201ENST00000377047 ASPGQ86U10 573 aa13.19□□□□□ -0.3
GPC6-201ENST00000377047 NPAS3Q8IXF0 933 aa13.19□□□□□ -0.3
GPC6-201ENST00000377047 NAXEQ8NCW5 288 aa13.19□□□□□ -0.3
GPC6-201ENST00000377047 PTCHD1Q96NR3 888 aa13.19□□□□□ -0.3
GPC6-201ENST00000377047 MYOCOSA0A1B0GUC4 107 aa13.19□□□□□ -0.3
GPC6-201ENST00000377047 TLR4O00206 839 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms