RNA–Protein interactions for RNA: ENST00000377017.5

TIMP1-202, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 2 BASIC

Gene TIMP1, Length 626 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-202ENST00000377017 RAP2CQ9Y3L5 183 aa12.59□□□□□ -0.39
TIMP1-202ENST00000377017 DMXL1Q9Y485 3027 aa12.59□□□□□ -0.39
TIMP1-202ENST00000377017 LOC105369274A0A096LPK9 316 aa12.58□□□□□ -0.4
TIMP1-202ENST00000377017 LOC102723532A0A0G2JNH3 316 aa12.58□□□□□ -0.4
TIMP1-202ENST00000377017 FAM149AA5PLN7 773 aa12.58□□□□□ -0.4
TIMP1-202ENST00000377017 FFAR3O14843 346 aa12.58□□□□□ -0.4
TIMP1-202ENST00000377017 GPR42O15529 346 aa12.58□□□□□ -0.4
TIMP1-202ENST00000377017 LCMT2O60294 686 aaKnown RBP12.58□□□□□ -0.4
TIMP1-202ENST00000377017 SNNO75324 88 aaPredicted RBP12.58□□□□□ -0.4
TIMP1-202ENST00000377017 ULK1O75385 1050 aa12.58□□□□□ -0.4
TIMP1-202ENST00000377017 CLEC3AO75596 197 aa12.58□□□□□ -0.4
TIMP1-202ENST00000377017 LYPLA1O75608 230 aaPredicted RBP12.58□□□□□ -0.4
TIMP1-202ENST00000377017 FGF4P08620 206 aa12.58□□□□□ -0.4
TIMP1-202ENST00000377017 HBQ1P09105 142 aa12.58□□□□□ -0.4
TIMP1-202ENST00000377017 FGF5P12034 268 aa12.58□□□□□ -0.4
TIMP1-202ENST00000377017 CCL4P13236 92 aa12.58□□□□□ -0.4
TIMP1-202ENST00000377017 MAPK10P53779 464 aa12.58□□□□□ -0.4
TIMP1-202ENST00000377017 STXBP1P61764 594 aaKnown RBP12.58□□□□□ -0.4
TIMP1-202ENST00000377017 CYP4F2P78329 520 aa12.58□□□□□ -0.4
TIMP1-202ENST00000377017 DDX39BQ13838 428 aaKnown RBP12.58□□□□□ -0.4
TIMP1-202ENST00000377017 NDUFA9Q16795 377 aa12.58□□□□□ -0.4
TIMP1-202ENST00000377017 SH2D4BQ5SQS7 431 aa12.58□□□□□ -0.4
TIMP1-202ENST00000377017 WASHC2DQ5SRD0 308 aa12.58□□□□□ -0.4
TIMP1-202ENST00000377017 YOD1Q5VVQ6 348 aaPredicted RBP12.58□□□□□ -0.4
TIMP1-202ENST00000377017 FRMPD2BQ6IN97 320 aa12.58□□□□□ -0.4
TIMP1-202ENST00000377017 FOXR1Q6PIV2 292 aa12.58□□□□□ -0.4
TIMP1-202ENST00000377017 CLYBLQ8N0X4 340 aa12.58□□□□□ -0.4
TIMP1-202ENST00000377017 OR4N4Q8N0Y3 316 aa12.58□□□□□ -0.4
TIMP1-202ENST00000377017 LSMEM2Q8N112 164 aa12.58□□□□□ -0.4
TIMP1-202ENST00000377017 ANKRD53Q8N9V6 530 aa12.58□□□□□ -0.4
TIMP1-202ENST00000377017 WDR20Q8TBZ3 569 aa12.58□□□□□ -0.4
TIMP1-202ENST00000377017 NT5CQ8TCD5 201 aa12.58□□□□□ -0.4
TIMP1-202ENST00000377017 SELENOMQ8WWX9 145 aa12.58□□□□□ -0.4
TIMP1-202ENST00000377017 FAR2Q96K12 515 aa12.58□□□□□ -0.4
TIMP1-202ENST00000377017 ZNF285Q96NJ3 590 aa12.58□□□□□ -0.4
TIMP1-202ENST00000377017 TAAR9Q96RI9 348 aa12.58□□□□□ -0.4
TIMP1-202ENST00000377017 DDA1Q9BW61 102 aa12.58□□□□□ -0.4
TIMP1-202ENST00000377017 ASPSCR1Q9BZE9 553 aa12.58□□□□□ -0.4
TIMP1-202ENST00000377017 SLC7A5P2Q9GIP4 190 aa12.58□□□□□ -0.4
TIMP1-202ENST00000377017 POLR1BQ9H9Y6 1135 aa12.58□□□□□ -0.4
TIMP1-202ENST00000377017 PFDN4Q9NQP4 134 aa12.58□□□□□ -0.4
TIMP1-202ENST00000377017 ENAMQ9NRM1 1142 aa12.58□□□□□ -0.4
TIMP1-202ENST00000377017 PISDQ9UG56 409 aa12.58□□□□□ -0.4
TIMP1-202ENST00000377017 ZNF225Q9UK10 706 aa12.58□□□□□ -0.4
TIMP1-202ENST00000377017 ZNF490Q9ULM2 529 aaPredicted RBP12.58□□□□□ -0.4
TIMP1-202ENST00000377017 SRPK3Q9UPE1 567 aa12.58□□□□□ -0.4
TIMP1-202ENST00000377017 SATB2Q9UPW6 733 aa12.58□□□□□ -0.4
TIMP1-202ENST00000377017 TRAF6Q9Y4K3 522 aa12.58□□□□□ -0.4
TIMP1-202ENST00000377017 PCDHGA8Q9Y5G5 932 aa12.58□□□□□ -0.4
TIMP1-202ENST00000377017 KIF26BQ2KJY2 2108 aa12.58□□□□□ -0.4
TIMP1-202ENST00000377017 KNTC1P50748 2209 aa12.57□□□□□ -0.4
TIMP1-202ENST00000377017 A0A1B0GTL3 188 aa12.57□□□□□ -0.4
TIMP1-202ENST00000377017 FOXE1O00358 373 aaPredicted RBP12.57□□□□□ -0.4
TIMP1-202ENST00000377017 MANBAO00462 879 aa12.57□□□□□ -0.4
TIMP1-202ENST00000377017 ITM2AO43736 263 aa12.57□□□□□ -0.4
TIMP1-202ENST00000377017 HYAL3O43820 417 aaPredicted RBP12.57□□□□□ -0.4
TIMP1-202ENST00000377017 SERPINA6P08185 405 aa12.57□□□□□ -0.4
TIMP1-202ENST00000377017 ITIH1P19827 911 aa12.57□□□□□ -0.4
TIMP1-202ENST00000377017 ARSFP54793 590 aa12.57□□□□□ -0.4
TIMP1-202ENST00000377017 EMP3P54852 163 aa12.57□□□□□ -0.4
TIMP1-202ENST00000377017 SKP1P63208 163 aa12.57□□□□□ -0.4
TIMP1-202ENST00000377017 GABREP78334 506 aa12.57□□□□□ -0.4
TIMP1-202ENST00000377017 TGM3Q08188 693 aa12.57□□□□□ -0.4
TIMP1-202ENST00000377017 FAM214AQ32MH5 1076 aa12.57□□□□□ -0.4
TIMP1-202ENST00000377017 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.57□□□□□ -0.4
TIMP1-202ENST00000377017 GARNL3Q5VVW2 1013 aa12.57□□□□□ -0.4
TIMP1-202ENST00000377017 KANK2Q63ZY3 851 aa12.57□□□□□ -0.4
TIMP1-202ENST00000377017 RGS9BPQ6ZS82 235 aa12.57□□□□□ -0.4
TIMP1-202ENST00000377017 VN1R4Q7Z5H5 301 aa12.57□□□□□ -0.4
TIMP1-202ENST00000377017 CRLF3Q8IUI8 442 aa12.57□□□□□ -0.4
TIMP1-202ENST00000377017 TMEM126BQ8IUX1 230 aa12.57□□□□□ -0.4
TIMP1-202ENST00000377017 OR1L3Q8NH93 324 aa12.57□□□□□ -0.4
TIMP1-202ENST00000377017 HUS1BQ8NHY5 278 aa12.57□□□□□ -0.4
TIMP1-202ENST00000377017 ZNF473Q8WTR7 871 aaKnown RBP12.57□□□□□ -0.4
TIMP1-202ENST00000377017 TM4SF19Q96DZ7 209 aa12.57□□□□□ -0.4
TIMP1-202ENST00000377017 CMTM7Q96FZ5 175 aa12.57□□□□□ -0.4
TIMP1-202ENST00000377017 NDC1Q9BTX1 674 aa12.57□□□□□ -0.4
TIMP1-202ENST00000377017 B3GNT4Q9C0J1 378 aa12.57□□□□□ -0.4
TIMP1-202ENST00000377017 NRSN2Q9GZP1 204 aa12.57□□□□□ -0.4
TIMP1-202ENST00000377017 BRF2Q9HAW0 419 aa12.57□□□□□ -0.4
TIMP1-202ENST00000377017 DMRT3Q9NQL9 472 aa12.57□□□□□ -0.4
TIMP1-202ENST00000377017 NMRK1Q9NWW6 199 aa12.57□□□□□ -0.4
TIMP1-202ENST00000377017 PSD3Q9NYI0 1048 aa12.57□□□□□ -0.4
TIMP1-202ENST00000377017 PPT2Q9UMR5 302 aa12.57□□□□□ -0.4
TIMP1-202ENST00000377017 FIS1Q9Y3D6 152 aa12.57□□□□□ -0.4
TIMP1-202ENST00000377017 A0A088AWK7 358 aa12.56□□□□□ -0.4
TIMP1-202ENST00000377017 FITM1A5D6W6 292 aa12.56□□□□□ -0.4
TIMP1-202ENST00000377017 HCRTR1O43613 425 aa12.56□□□□□ -0.4
TIMP1-202ENST00000377017 SCRG1O75711 98 aa12.56□□□□□ -0.4
TIMP1-202ENST00000377017 HSD3B1P14060 373 aa12.56□□□□□ -0.4
TIMP1-202ENST00000377017 ZNF10P21506 573 aaPredicted RBP12.56□□□□□ -0.4
TIMP1-202ENST00000377017 HSD3B2P26439 372 aa12.56□□□□□ -0.4
TIMP1-202ENST00000377017 RBMS1P29558 406 aaKnown RBP12.56□□□□□ -0.4
TIMP1-202ENST00000377017 MDH1P40925 334 aaKnown RBP12.56□□□□□ -0.4
TIMP1-202ENST00000377017 RPL14P50914 215 aaKnown RBP12.56□□□□□ -0.4
TIMP1-202ENST00000377017 HK2P52789 917 aa12.56□□□□□ -0.4
TIMP1-202ENST00000377017 OCRLQ01968 901 aa12.56□□□□□ -0.4
TIMP1-202ENST00000377017 CSTF3Q12996 717 aaKnown RBP12.56□□□□□ -0.4
TIMP1-202ENST00000377017 MUM1Q2TAK8 710 aa12.56□□□□□ -0.4
TIMP1-202ENST00000377017 PRTGQ2VWP7 1150 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms