RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 TTC27Q6P3X3 843 aa13.94□□□□□ -0.18
HDAC6-204ENST00000376643 AGTRAPQ6RW13 159 aa13.94□□□□□ -0.18
HDAC6-204ENST00000376643 VN1R4Q7Z5H5 301 aa13.94□□□□□ -0.18
HDAC6-204ENST00000376643 TMEM178AQ8NBL3 297 aa13.94□□□□□ -0.18
HDAC6-204ENST00000376643 M1APQ8TC57 530 aa13.94□□□□□ -0.18
HDAC6-204ENST00000376643 ACTRT1Q8TDG2 376 aa13.94□□□□□ -0.18
HDAC6-204ENST00000376643 KCNK13Q9HB14 408 aa13.94□□□□□ -0.18
HDAC6-204ENST00000376643 CHST11Q9NPF2 352 aa13.94□□□□□ -0.18
HDAC6-204ENST00000376643 IARS2Q9NSE4 1012 aaKnown RBP13.94□□□□□ -0.18
HDAC6-204ENST00000376643 TRGV8A0A0C4DH27 118 aa13.93□□□□□ -0.18
HDAC6-204ENST00000376643 PRSS44E7EML9 344 aa13.93□□□□□ -0.18
HDAC6-204ENST00000376643 CES2O00748 559 aa13.93□□□□□ -0.18
HDAC6-204ENST00000376643 SEC24DO94855 1032 aaPredicted RBP13.93□□□□□ -0.18
HDAC6-204ENST00000376643 HAUS5O94927 633 aa13.93□□□□□ -0.18
HDAC6-204ENST00000376643 UNC5CO95185 931 aa13.93□□□□□ -0.18
HDAC6-204ENST00000376643 CD46P15529 392 aa13.93□□□□□ -0.18
HDAC6-204ENST00000376643 IL1RNP18510 177 aa13.93□□□□□ -0.18
HDAC6-204ENST00000376643 MPP1Q00013 466 aa13.93□□□□□ -0.18
HDAC6-204ENST00000376643 ACTN3Q08043 901 aaPredicted RBP13.93□□□□□ -0.18
HDAC6-204ENST00000376643 RGS1Q08116 209 aa13.93□□□□□ -0.18
HDAC6-204ENST00000376643 PDAP1Q13442 181 aaKnown RBP13.93□□□□□ -0.18
HDAC6-204ENST00000376643 NAE1Q13564 534 aa13.93□□□□□ -0.18
HDAC6-204ENST00000376643 SYT16Q17RD7 645 aa13.93□□□□□ -0.18
HDAC6-204ENST00000376643 KRTCAP3Q53RY4 240 aa13.93□□□□□ -0.18
HDAC6-204ENST00000376643 ZNF766Q5HY98 468 aa13.93□□□□□ -0.18
HDAC6-204ENST00000376643 C1QL3Q5VWW1 255 aa13.93□□□□□ -0.18
HDAC6-204ENST00000376643 DUPD1Q68J44 220 aa13.93□□□□□ -0.18
HDAC6-204ENST00000376643 ABHD13Q7L211 337 aa13.93□□□□□ -0.18
HDAC6-204ENST00000376643 STRA8Q7Z7C7 330 aa13.93□□□□□ -0.18
HDAC6-204ENST00000376643 PLD3Q8IV08 490 aa13.93□□□□□ -0.18
HDAC6-204ENST00000376643 CNTN4Q8IWV2 1026 aa13.93□□□□□ -0.18
HDAC6-204ENST00000376643 EID3Q8N140 333 aa13.93□□□□□ -0.18
HDAC6-204ENST00000376643 ZNF808Q8N4W9 903 aaPredicted RBP13.93□□□□□ -0.18
HDAC6-204ENST00000376643 MFSD9Q8NBP5 474 aa13.93□□□□□ -0.18
HDAC6-204ENST00000376643 PLPP5Q8NEB5 264 aa13.93□□□□□ -0.18
HDAC6-204ENST00000376643 MARVELD3Q96A59 401 aa13.93□□□□□ -0.18
HDAC6-204ENST00000376643 TM4SF19Q96DZ7 209 aa13.93□□□□□ -0.18
HDAC6-204ENST00000376643 SIGLEC10Q96LC7 697 aa13.93□□□□□ -0.18
HDAC6-204ENST00000376643 TAAR6Q96RI8 345 aa13.93□□□□□ -0.18
HDAC6-204ENST00000376643 UTP23Q9BRU9 249 aaKnown RBP13.93□□□□□ -0.18
HDAC6-204ENST00000376643 SARGQ9BW04 601 aa13.93□□□□□ -0.18
HDAC6-204ENST00000376643 SGPP1Q9BX95 441 aa13.93□□□□□ -0.18
HDAC6-204ENST00000376643 MMP25Q9NPA2 562 aa13.93□□□□□ -0.18
HDAC6-204ENST00000376643 ARL15Q9NXU5 204 aa13.93□□□□□ -0.18
HDAC6-204ENST00000376643 ASIC3Q9UHC3 531 aa13.93□□□□□ -0.18
HDAC6-204ENST00000376643 PDE10AQ9Y233 779 aa13.93□□□□□ -0.18
HDAC6-204ENST00000376643 HEATR5BQ9P2D3 2071 aa13.93□□□□□ -0.18
HDAC6-204ENST00000376643 UTP20O75691 2785 aaKnown RBP13.93□□□□□ -0.18
HDAC6-204ENST00000376643 A8MUI8 341 aa13.92□□□□□ -0.18
HDAC6-204ENST00000376643 MAGEB17A8MXT2 336 aa13.92□□□□□ -0.18
HDAC6-204ENST00000376643 KCNK10P57789 538 aa13.92□□□□□ -0.18
HDAC6-204ENST00000376643 CCZ1BP86790 482 aa13.92□□□□□ -0.18
HDAC6-204ENST00000376643 CCZ1P86791 482 aaPredicted RBP13.92□□□□□ -0.18
HDAC6-204ENST00000376643 DHX9Q08211 1270 aaKnown RBP13.92□□□□□ -0.18
HDAC6-204ENST00000376643 NSDHLQ15738 373 aa13.92□□□□□ -0.18
HDAC6-204ENST00000376643 ACER2Q5QJU3 275 aa13.92□□□□□ -0.18
HDAC6-204ENST00000376643 H3F3CQ6NXT2 135 aa13.92□□□□□ -0.18
HDAC6-204ENST00000376643 ANKRD37Q7Z713 158 aa13.92□□□□□ -0.18
HDAC6-204ENST00000376643 ABHD11Q8NFV4 315 aa13.92□□□□□ -0.18
HDAC6-204ENST00000376643 EEF1AKMT1Q8WVE0 214 aa13.92□□□□□ -0.18
HDAC6-204ENST00000376643 ALKBH8Q96BT7 664 aaKnown RBP13.92□□□□□ -0.18
HDAC6-204ENST00000376643 LINGO1Q96FE5 620 aa13.92□□□□□ -0.18
HDAC6-204ENST00000376643 MAGED4Q96JG8 741 aa13.92□□□□□ -0.18
HDAC6-204ENST00000376643 RUNDC3BQ96NL0 473 aa13.92□□□□□ -0.18
HDAC6-204ENST00000376643 MESP1Q9BRJ9 268 aa13.92□□□□□ -0.18
HDAC6-204ENST00000376643 HCN3Q9P1Z3 774 aa13.92□□□□□ -0.18
HDAC6-204ENST00000376643 NEU2Q9Y3R4 380 aa13.92□□□□□ -0.18
HDAC6-204ENST00000376643 DIDO1Q9BTC0 2240 aaKnown RBP13.92□□□□□ -0.18
HDAC6-204ENST00000376643 MDC1Q14676 2089 aaKnown RBP13.92□□□□□ -0.18
HDAC6-204ENST00000376643 SVILO95425 2214 aa13.91□□□□□ -0.18
HDAC6-204ENST00000376643 NBPF19A0A087WUL8 3843 aa13.91□□□□□ -0.18
HDAC6-204ENST00000376643 TRBC2A0A5B9 178 aa13.91□□□□□ -0.18
HDAC6-204ENST00000376643 SYNDIG1LA6NDD5 238 aa13.91□□□□□ -0.18
HDAC6-204ENST00000376643 SGK494L7N484 410 aa13.91□□□□□ -0.18
HDAC6-204ENST00000376643 ZSCAN12O43309 604 aa13.91□□□□□ -0.18
HDAC6-204ENST00000376643 CDH1P12830 882 aa13.91□□□□□ -0.18
HDAC6-204ENST00000376643 TNFRSF8P28908 595 aa13.91□□□□□ -0.18
HDAC6-204ENST00000376643 EEF1DP29692 281 aaKnown RBP13.91□□□□□ -0.18
HDAC6-204ENST00000376643 PTGER4P35408 488 aa13.91□□□□□ -0.18
HDAC6-204ENST00000376643 CA7P43166 264 aa13.91□□□□□ -0.18
HDAC6-204ENST00000376643 SMSP52788 366 aa13.91□□□□□ -0.18
HDAC6-204ENST00000376643 ABRAXAS2Q15018 415 aa13.91□□□□□ -0.18
HDAC6-204ENST00000376643 RNASEH2BQ5TBB1 312 aaKnown RBP13.91□□□□□ -0.18
HDAC6-204ENST00000376643 FAM45BPQ6NSW5 357 aa13.91□□□□□ -0.18
HDAC6-204ENST00000376643 PAPD4Q6PIY7 484 aaKnown RBP13.91□□□□□ -0.18
HDAC6-204ENST00000376643 XKRXQ6PP77 449 aa13.91□□□□□ -0.18
HDAC6-204ENST00000376643 PAQR3Q6TCH7 311 aa13.91□□□□□ -0.18
HDAC6-204ENST00000376643 SYDE1Q6ZW31 735 aaPredicted RBP13.91□□□□□ -0.18
HDAC6-204ENST00000376643 SLC26A11Q86WA9 606 aa13.91□□□□□ -0.18
HDAC6-204ENST00000376643 PDIK1LQ8N165 341 aa13.91□□□□□ -0.18
HDAC6-204ENST00000376643 ARMC2Q8NEN0 867 aa13.91□□□□□ -0.18
HDAC6-204ENST00000376643 ZCCHC10Q8TBK6 192 aa13.91□□□□□ -0.18
HDAC6-204ENST00000376643 FAM45AQ8TCE6 357 aa13.91□□□□□ -0.18
HDAC6-204ENST00000376643 THAP3Q8WTV1 239 aaPredicted RBP13.91□□□□□ -0.18
HDAC6-204ENST00000376643 TBC1D20Q96BZ9 403 aa13.91□□□□□ -0.18
HDAC6-204ENST00000376643 LRRC39Q96DD0 335 aa13.91□□□□□ -0.18
HDAC6-204ENST00000376643 NDNQ99608 321 aa13.91□□□□□ -0.18
HDAC6-204ENST00000376643 ATG10Q9H0Y0 220 aa13.91□□□□□ -0.18
HDAC6-204ENST00000376643 SYNPO2LQ9H987 977 aa13.91□□□□□ -0.18
HDAC6-204ENST00000376643 PPANQ9NQ55 473 aaKnown RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms