RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 FCF1Q9Y324 198 aaKnown RBP12.5□□□□□ -0.41
MSH5-204ENST00000375755 DENND4CQ5VZ89 1909 aa12.5□□□□□ -0.41
MSH5-204ENST00000375755 KDELR3O43731 214 aa12.49□□□□□ -0.41
MSH5-204ENST00000375755 RPP40O75818 363 aaKnown RBP12.49□□□□□ -0.41
MSH5-204ENST00000375755 PGRP06401 933 aa12.49□□□□□ -0.41
MSH5-204ENST00000375755 GKP32189 559 aa12.49□□□□□ -0.41
MSH5-204ENST00000375755 TNFSF8P32971 234 aa12.49□□□□□ -0.41
MSH5-204ENST00000375755 ARHGDIAP52565 204 aa12.49□□□□□ -0.41
MSH5-204ENST00000375755 NPRL3Q12980 569 aa12.49□□□□□ -0.41
MSH5-204ENST00000375755 ZMAT1Q5H9K5 638 aa12.49□□□□□ -0.41
MSH5-204ENST00000375755 ATXN7L2Q5T6C5 722 aaPredicted RBP12.49□□□□□ -0.41
MSH5-204ENST00000375755 ERAP2Q6P179 960 aa12.49□□□□□ -0.41
MSH5-204ENST00000375755 TPGS1Q6ZTW0 290 aa12.49□□□□□ -0.41
MSH5-204ENST00000375755 P3H2Q8IVL5 708 aa12.49□□□□□ -0.41
MSH5-204ENST00000375755 OVCA2Q8WZ82 227 aa12.49□□□□□ -0.41
MSH5-204ENST00000375755 TRMT2BQ96GJ1 504 aaKnown RBP12.49□□□□□ -0.41
MSH5-204ENST00000375755 MAP6Q96JE9 813 aa12.49□□□□□ -0.41
MSH5-204ENST00000375755 RIPOR3Q96MK2 946 aa12.49□□□□□ -0.41
MSH5-204ENST00000375755 CINPQ9BW66 212 aaPredicted RBP12.49□□□□□ -0.41
MSH5-204ENST00000375755 ROGDIQ9GZN7 287 aa12.49□□□□□ -0.41
MSH5-204ENST00000375755 MAGEH1Q9H213 219 aa12.49□□□□□ -0.41
MSH5-204ENST00000375755 KIF17Q9P2E2 1029 aa12.49□□□□□ -0.41
MSH5-204ENST00000375755 PCDHGA6Q9Y5G7 932 aa12.49□□□□□ -0.41
MSH5-204ENST00000375755 PRUNE2Q8WUY3 3088 aa12.49□□□□□ -0.41
MSH5-204ENST00000375755 CCL16O15467 120 aa12.49□□□□□ -0.41
MSH5-204ENST00000375755 INSIG1O15503 277 aa12.49□□□□□ -0.41
MSH5-204ENST00000375755 GPR39O43194 453 aa12.49□□□□□ -0.41
MSH5-204ENST00000375755 PTHP01270 115 aa12.49□□□□□ -0.41
MSH5-204ENST00000375755 FPR1P21462 350 aa12.49□□□□□ -0.41
MSH5-204ENST00000375755 DNAJA1P31689 397 aaKnown RBP12.49□□□□□ -0.41
MSH5-204ENST00000375755 HNF4AP41235 474 aa12.49□□□□□ -0.41
MSH5-204ENST00000375755 CCR2P41597 374 aa12.49□□□□□ -0.41
MSH5-204ENST00000375755 OR3A3P47888 321 aa12.49□□□□□ -0.41
MSH5-204ENST00000375755 CDKN1CP49918 316 aaPredicted RBP12.49□□□□□ -0.41
MSH5-204ENST00000375755 ARMCX4Q5H9R4 360 aa12.49□□□□□ -0.41
MSH5-204ENST00000375755 ARMC4Q5T2S8 1044 aa12.49□□□□□ -0.41
MSH5-204ENST00000375755 ATG9BQ674R7 924 aa12.49□□□□□ -0.41
MSH5-204ENST00000375755 GALNT10Q86SR1 603 aa12.49□□□□□ -0.41
MSH5-204ENST00000375755 APCDD1Q8J025 514 aa12.49□□□□□ -0.41
MSH5-204ENST00000375755 MDGA1Q8NFP4 955 aa12.49□□□□□ -0.41
MSH5-204ENST00000375755 GGHQ92820 318 aa12.49□□□□□ -0.41
MSH5-204ENST00000375755 FATE1Q969F0 183 aa12.49□□□□□ -0.41
MSH5-204ENST00000375755 TBC1D20Q96BZ9 403 aa12.49□□□□□ -0.41
MSH5-204ENST00000375755 CEP19Q96LK0 163 aa12.49□□□□□ -0.41
MSH5-204ENST00000375755 TRIB3Q96RU7 358 aa12.49□□□□□ -0.41
MSH5-204ENST00000375755 CPPED1Q9BRF8 314 aaPredicted RBP12.49□□□□□ -0.41
MSH5-204ENST00000375755 ZBP1Q9H171 429 aa12.49□□□□□ -0.41
MSH5-204ENST00000375755 RUBCNLQ9H714 662 aa12.49□□□□□ -0.41
MSH5-204ENST00000375755 TOR4AQ9NXH8 423 aa12.49□□□□□ -0.41
MSH5-204ENST00000375755 STMN3Q9NZ72 180 aa12.49□□□□□ -0.41
MSH5-204ENST00000375755 TRAPPC4Q9Y296 219 aa12.49□□□□□ -0.41
MSH5-204ENST00000375755 PCDHGB2Q9Y5G2 931 aa12.49□□□□□ -0.41
MSH5-204ENST00000375755 C12orf71A8MTZ7 269 aa12.48□□□□□ -0.41
MSH5-204ENST00000375755 KIAA0513O60268 411 aa12.48□□□□□ -0.41
MSH5-204ENST00000375755 CPNE3O75131 537 aaKnown RBP12.48□□□□□ -0.41
MSH5-204ENST00000375755 CLDN11O75508 207 aa12.48□□□□□ -0.41
MSH5-204ENST00000375755 UGT2B17O75795 530 aa12.48□□□□□ -0.41
MSH5-204ENST00000375755 SLITRK5O94991 958 aa12.48□□□□□ -0.41
MSH5-204ENST00000375755 CXCL14O95715 111 aa12.48□□□□□ -0.41
MSH5-204ENST00000375755 TSPAN12O95859 305 aa12.48□□□□□ -0.41
MSH5-204ENST00000375755 PRLP01236 227 aa12.48□□□□□ -0.41
MSH5-204ENST00000375755 IL7P13232 177 aa12.48□□□□□ -0.41
MSH5-204ENST00000375755 RGS6P49758 472 aa12.48□□□□□ -0.41
MSH5-204ENST00000375755 NUDT6P53370 316 aa12.48□□□□□ -0.41
MSH5-204ENST00000375755 GPSM1Q86YR5 675 aa12.48□□□□□ -0.41
MSH5-204ENST00000375755 CCDC28AQ8IWP9 274 aa12.48□□□□□ -0.41
MSH5-204ENST00000375755 OR4F6Q8NGB9 312 aa12.48□□□□□ -0.41
MSH5-204ENST00000375755 BADQ92934 168 aa12.48□□□□□ -0.41
MSH5-204ENST00000375755 COQ7Q99807 217 aa12.48□□□□□ -0.41
MSH5-204ENST00000375755 MGME1Q9BQP7 344 aa12.48□□□□□ -0.41
MSH5-204ENST00000375755 IL1RAPQ9NPH3 570 aa12.48□□□□□ -0.41
MSH5-204ENST00000375755 CCL26Q9Y258 94 aa12.48□□□□□ -0.41
MSH5-204ENST00000375755 A0A1B0GVM2 712 aa12.48□□□□□ -0.41
MSH5-204ENST00000375755 PRAMEF12O95522 483 aa12.48□□□□□ -0.41
MSH5-204ENST00000375755 B3GALT4O96024 378 aa12.48□□□□□ -0.41
MSH5-204ENST00000375755 CDK1P06493 297 aa12.48□□□□□ -0.41
MSH5-204ENST00000375755 STSP08842 583 aa12.48□□□□□ -0.41
MSH5-204ENST00000375755 ADORA3P0DMS8 318 aa12.48□□□□□ -0.41
MSH5-204ENST00000375755 OGNP20774 298 aaKnown RBP12.48□□□□□ -0.41
MSH5-204ENST00000375755 CSKP41240 450 aa12.48□□□□□ -0.41
MSH5-204ENST00000375755 CYP4F2P78329 520 aa12.48□□□□□ -0.41
MSH5-204ENST00000375755 VLDLRP98155 873 aa12.48□□□□□ -0.41
MSH5-204ENST00000375755 BAK1Q16611 211 aa12.48□□□□□ -0.41
MSH5-204ENST00000375755 GPAT3Q53EU6 434 aa12.48□□□□□ -0.41
MSH5-204ENST00000375755 ZNF551Q7Z340 670 aaPredicted RBP12.48□□□□□ -0.41
MSH5-204ENST00000375755 BBS7Q8IWZ6 715 aa12.48□□□□□ -0.41
MSH5-204ENST00000375755 FAM109AQ8N4B1 249 aa12.48□□□□□ -0.41
MSH5-204ENST00000375755 CLHC1Q8NHS4 586 aa12.48□□□□□ -0.41
MSH5-204ENST00000375755 SETD6Q8TBK2 473 aa12.48□□□□□ -0.41
MSH5-204ENST00000375755 RMDN1Q96DB5 314 aa12.48□□□□□ -0.41
MSH5-204ENST00000375755 OR52E6Q96RD3 313 aa12.48□□□□□ -0.41
MSH5-204ENST00000375755 ZNF717Q9BY31 904 aaPredicted RBP12.48□□□□□ -0.41
MSH5-204ENST00000375755 PRRG3Q9BZD7 231 aa12.48□□□□□ -0.41
MSH5-204ENST00000375755 DPY30Q9C005 99 aa12.48□□□□□ -0.41
MSH5-204ENST00000375755 MKRN2Q9H000 416 aaKnown RBP12.48□□□□□ -0.41
MSH5-204ENST00000375755 BPIFA1Q9NP55 256 aa12.48□□□□□ -0.41
MSH5-204ENST00000375755 SAMHD1Q9Y3Z3 626 aaKnown RBP12.48□□□□□ -0.41
MSH5-204ENST00000375755 CCL27Q9Y4X3 112 aa12.48□□□□□ -0.41
MSH5-204ENST00000375755 MEN1O00255 615 aa12.48□□□□□ -0.41
MSH5-204ENST00000375755 OR7A17O14581 309 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms