RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 PXYLP1Q8TE99 480 aa14.03□□□□□ -0.16
MSH5-201ENST00000375703 SLC38A4Q969I6 547 aa14.03□□□□□ -0.16
MSH5-201ENST00000375703 LMLNQ96KR4 655 aa14.03□□□□□ -0.16
MSH5-201ENST00000375703 SIGLEC11Q96RL6 698 aa14.03□□□□□ -0.16
MSH5-201ENST00000375703 ITPAQ9BY32 194 aa14.03□□□□□ -0.16
MSH5-201ENST00000375703 CHST8Q9H2A9 424 aa14.03□□□□□ -0.16
MSH5-201ENST00000375703 INIPQ9NRY2 104 aa14.03□□□□□ -0.16
MSH5-201ENST00000375703 GIN1Q9NXP7 522 aa14.03□□□□□ -0.16
MSH5-201ENST00000375703 SLC25A13Q9UJS0 675 aa14.03□□□□□ -0.16
MSH5-201ENST00000375703 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.03□□□□□ -0.163e-7■■□□□ 11.5
MSH5-201ENST00000375703 MICAL3Q7RTP6 2002 aa14.03□□□□□ -0.16
MSH5-201ENST00000375703 C1orf226A1L170 272 aa14.03□□□□□ -0.16
MSH5-201ENST00000375703 TTC34A8MYJ7 566 aa14.03□□□□□ -0.16
MSH5-201ENST00000375703 E9PQ18 207 aa14.03□□□□□ -0.16
MSH5-201ENST00000375703 GSTM1P09488 218 aa14.03□□□□□ -0.16
MSH5-201ENST00000375703 ALOX5P09917 674 aa14.03□□□□□ -0.16
MSH5-201ENST00000375703 GJA1P17302 382 aa14.03□□□□□ -0.16
MSH5-201ENST00000375703 IDSP22304 550 aa14.03□□□□□ -0.16
MSH5-201ENST00000375703 TGM1P22735 817 aa14.03□□□□□ -0.16
MSH5-201ENST00000375703 GRHL2Q6ISB3 625 aa14.03□□□□□ -0.16
MSH5-201ENST00000375703 GDPD4Q6W3E5 623 aa14.03□□□□□ -0.16
MSH5-201ENST00000375703 NPAS3Q8IXF0 933 aa14.03□□□□□ -0.16
MSH5-201ENST00000375703 ATL1Q8WXF7 558 aa14.03□□□□□ -0.16
MSH5-201ENST00000375703 METTL2AQ96IZ6 378 aaKnown RBP14.03□□□□□ -0.16
MSH5-201ENST00000375703 ZNF558Q96NG5 402 aa14.03□□□□□ -0.16
MSH5-201ENST00000375703 FEVQ99581 238 aa14.03□□□□□ -0.16
MSH5-201ENST00000375703 BTBD2Q9BX70 525 aa14.03□□□□□ -0.16
MSH5-201ENST00000375703 GABARAPL3Q9BY60 117 aa14.03□□□□□ -0.16
MSH5-201ENST00000375703 BRF2Q9HAW0 419 aa14.03□□□□□ -0.16
MSH5-201ENST00000375703 OSGIN1Q9UJX0 560 aa14.03□□□□□ -0.16
MSH5-201ENST00000375703 PADI2Q9Y2J8 665 aa14.03□□□□□ -0.16
MSH5-201ENST00000375703 TESMINQ9Y4I5 508 aa14.03□□□□□ -0.16
MSH5-201ENST00000375703 PLXNB3Q9ULL4 1909 aa14.02□□□□□ -0.16
MSH5-201ENST00000375703 TMEM202A6NGA9 273 aa14.02□□□□□ -0.16
MSH5-201ENST00000375703 TMEM221A6NGB7 291 aa14.02□□□□□ -0.16
MSH5-201ENST00000375703 LEFTY2O00292 366 aa14.02□□□□□ -0.16
MSH5-201ENST00000375703 TNFRSF11BO00300 401 aa14.02□□□□□ -0.16
MSH5-201ENST00000375703 GRM6O15303 877 aa14.02□□□□□ -0.16
MSH5-201ENST00000375703 ABCB1P08183 1280 aaPredicted RBP14.02□□□□□ -0.16
MSH5-201ENST00000375703 HSD3B1P14060 373 aa14.02□□□□□ -0.16
MSH5-201ENST00000375703 HSD3B2P26439 372 aa14.02□□□□□ -0.16
MSH5-201ENST00000375703 SELENOWP63302 87 aa14.02□□□□□ -0.16
MSH5-201ENST00000375703 CD300CQ08708 224 aa14.02□□□□□ -0.16
MSH5-201ENST00000375703 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.02□□□□□ -0.16
MSH5-201ENST00000375703 ADNP2Q6IQ32 1131 aa14.02□□□□□ -0.16
MSH5-201ENST00000375703 ANGPTL8Q6UXH0 198 aa14.02□□□□□ -0.16
MSH5-201ENST00000375703 Q6ZVL8 140 aa14.02□□□□□ -0.16
MSH5-201ENST00000375703 Q6ZVU0 165 aa14.02□□□□□ -0.16
MSH5-201ENST00000375703 HSD11B1LQ7Z5J1 315 aa14.02□□□□□ -0.16
MSH5-201ENST00000375703 FAM124AQ86V42 546 aa14.02□□□□□ -0.16
MSH5-201ENST00000375703 RASGRP3Q8IV61 690 aa14.02□□□□□ -0.16
MSH5-201ENST00000375703 SLC39A11Q8N1S5 342 aa14.02□□□□□ -0.16
MSH5-201ENST00000375703 C11orf65Q8NCR3 313 aa14.02□□□□□ -0.16
MSH5-201ENST00000375703 RHOXF1Q8NHV9 184 aa14.02□□□□□ -0.16
MSH5-201ENST00000375703 FOXJ1Q92949 421 aa14.02□□□□□ -0.16
MSH5-201ENST00000375703 SMG9Q9H0W8 520 aaKnown RBP14.02□□□□□ -0.16
MSH5-201ENST00000375703 TMEM184CQ9NVA4 438 aa14.02□□□□□ -0.16
MSH5-201ENST00000375703 STOX2Q9P2F5 926 aaPredicted RBP14.02□□□□□ -0.16
MSH5-201ENST00000375703 GNG14A0A1W2PPG7 69 aa14.02□□□□□ -0.17
MSH5-201ENST00000375703 PSIP1O75475 530 aaKnown RBP14.02□□□□□ -0.17
MSH5-201ENST00000375703 GCM2O75603 506 aaPredicted RBP14.02□□□□□ -0.17
MSH5-201ENST00000375703 AP2A2O94973 939 aa14.02□□□□□ -0.17
MSH5-201ENST00000375703 C21orf33P30042 268 aaPredicted RBP14.02□□□□□ -0.17
MSH5-201ENST00000375703 LIPAP38571 399 aa14.02□□□□□ -0.17
MSH5-201ENST00000375703 CRATP43155 626 aa14.02□□□□□ -0.17
MSH5-201ENST00000375703 RPS3AP61247 264 aaKnown RBP14.02□□□□□ -0.17
MSH5-201ENST00000375703 ELP6Q0PNE2 266 aa14.02□□□□□ -0.17
MSH5-201ENST00000375703 TEAD4Q15561 434 aa14.02□□□□□ -0.17
MSH5-201ENST00000375703 CCSMST1Q4G0I0 132 aa14.02□□□□□ -0.17
MSH5-201ENST00000375703 GPR156Q8NFN8 814 aa14.02□□□□□ -0.17
MSH5-201ENST00000375703 OR4A15Q8NGL6 344 aa14.02□□□□□ -0.17
MSH5-201ENST00000375703 MCFD2Q8NI22 146 aa14.02□□□□□ -0.17
MSH5-201ENST00000375703 CHTF18Q8WVB6 975 aa14.02□□□□□ -0.17
MSH5-201ENST00000375703 COQ8BQ96D53 544 aa14.02□□□□□ -0.17
MSH5-201ENST00000375703 OR4K3Q96R72 315 aa14.02□□□□□ -0.17
MSH5-201ENST00000375703 HERC2P3Q9BVR0 1158 aa14.02□□□□□ -0.17
MSH5-201ENST00000375703 CEP44Q9C0F1 390 aa14.02□□□□□ -0.17
MSH5-201ENST00000375703 DCSTAMPQ9H295 470 aa14.02□□□□□ -0.17
MSH5-201ENST00000375703 DSN1Q9H410 356 aa14.02□□□□□ -0.17
MSH5-201ENST00000375703 AMBNQ9NP70 447 aa14.02□□□□□ -0.17
MSH5-201ENST00000375703 RAPGEFL1Q9UHV5 662 aa14.02□□□□□ -0.17
MSH5-201ENST00000375703 MAPRE3Q9UPY8 281 aa14.02□□□□□ -0.17
MSH5-201ENST00000375703 ZNF451Q9Y4E5 1061 aa14.02□□□□□ -0.17
MSH5-201ENST00000375703 TRAV19A0A0A6YYK7 116 aa14.01□□□□□ -0.17
MSH5-201ENST00000375703 TMEM229AB2RXF0 380 aa14.01□□□□□ -0.17
MSH5-201ENST00000375703 AIREO43918 545 aa14.01□□□□□ -0.17
MSH5-201ENST00000375703 PCDH7O60245 1069 aa14.01□□□□□ -0.17
MSH5-201ENST00000375703 CXCL10P02778 98 aa14.01□□□□□ -0.17
MSH5-201ENST00000375703 PCGF2P35227 344 aa14.01□□□□□ -0.17
MSH5-201ENST00000375703 EIF2B2P49770 351 aaKnown RBP14.01□□□□□ -0.17
MSH5-201ENST00000375703 PPP5CP53041 499 aa14.01□□□□□ -0.17
MSH5-201ENST00000375703 CASP9P55211 416 aa14.01□□□□□ -0.17
MSH5-201ENST00000375703 GAB1Q13480 694 aa14.01□□□□□ -0.17
MSH5-201ENST00000375703 ASTLQ6HA08 431 aaPredicted RBP14.01□□□□□ -0.17
MSH5-201ENST00000375703 TSEN54Q7Z6J9 526 aaKnown RBP14.01□□□□□ -0.17
MSH5-201ENST00000375703 CADM3Q8N126 398 aa14.01□□□□□ -0.17
MSH5-201ENST00000375703 OR7G3Q8NG95 312 aa14.01□□□□□ -0.17
MSH5-201ENST00000375703 HUS1BQ8NHY5 278 aa14.01□□□□□ -0.17
MSH5-201ENST00000375703 FCGR1BQ92637 280 aa14.01□□□□□ -0.17
MSH5-201ENST00000375703 PROX1Q92786 737 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms