RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 CRHBPP24387 322 aa16.27■□□□□ 0.2
VARS-215ENST00000375663 HMGCLP35914 325 aa16.27■□□□□ 0.2
VARS-215ENST00000375663 ALDH3B2P48448 385 aa16.27■□□□□ 0.2
VARS-215ENST00000375663 CREMQ03060 361 aa16.27■□□□□ 0.2
VARS-215ENST00000375663 CLEC12AQ5QGZ9 265 aa16.27■□□□□ 0.2
VARS-215ENST00000375663 MEIOBQ8N635 442 aa16.27■□□□□ 0.2
VARS-215ENST00000375663 TCEANCQ8N8B7 351 aa16.27■□□□□ 0.2
VARS-215ENST00000375663 FAM46DQ8NEK8 389 aa16.27■□□□□ 0.2
VARS-215ENST00000375663 FAM129BQ96TA1 746 aa16.27■□□□□ 0.2
VARS-215ENST00000375663 FEVQ99581 238 aa16.27■□□□□ 0.2
VARS-215ENST00000375663 OSER1Q9NX31 292 aa16.27■□□□□ 0.2
VARS-215ENST00000375663 CCDC59Q9P031 241 aaKnown RBP16.27■□□□□ 0.2
VARS-215ENST00000375663 TBC1D14Q9P2M4 693 aa16.27■□□□□ 0.2
VARS-215ENST00000375663 ENPP5Q9UJA9 477 aa16.27■□□□□ 0.2
VARS-215ENST00000375663 MBLAC1A4D2B0 266 aaPredicted RBP16.27■□□□□ 0.2
VARS-215ENST00000375663 DYRK3O43781 588 aa16.27■□□□□ 0.2
VARS-215ENST00000375663 ARRB2P32121 409 aa16.27■□□□□ 0.2
VARS-215ENST00000375663 CRISP3P54108 245 aa16.27■□□□□ 0.2
VARS-215ENST00000375663 FAM171BQ6P995 826 aa16.27■□□□□ 0.2
VARS-215ENST00000375663 Q6ZVU0 165 aa16.27■□□□□ 0.2
VARS-215ENST00000375663 TICAM1Q8IUC6 712 aa16.27■□□□□ 0.2
VARS-215ENST00000375663 PROKR1Q8TCW9 393 aa16.27■□□□□ 0.2
VARS-215ENST00000375663 MAELQ96JY0 434 aaKnown RBP16.27■□□□□ 0.2
VARS-215ENST00000375663 MND1Q9BWT6 205 aa16.27■□□□□ 0.2
VARS-215ENST00000375663 C1QTNF7Q9BXJ2 289 aa16.27■□□□□ 0.2
VARS-215ENST00000375663 ACTL7AQ9Y615 435 aa16.27■□□□□ 0.2
VARS-215ENST00000375663 CARNS1A5YM72 827 aa16.27■□□□□ 0.19
VARS-215ENST00000375663 BDKRB1P46663 353 aa16.27■□□□□ 0.19
VARS-215ENST00000375663 SLC11A1P49279 550 aa16.27■□□□□ 0.19
VARS-215ENST00000375663 LARS2Q15031 903 aaKnown RBP16.27■□□□□ 0.19
VARS-215ENST00000375663 KIAA1161Q6NSJ0 714 aa16.27■□□□□ 0.19
VARS-215ENST00000375663 GDPD4Q6W3E5 623 aa16.27■□□□□ 0.19
VARS-215ENST00000375663 TP53INP1Q96A56 240 aa16.27■□□□□ 0.19
VARS-215ENST00000375663 CPNE3O75131 537 aaKnown RBP16.26■□□□□ 0.19
VARS-215ENST00000375663 DCKP27707 260 aa16.26■□□□□ 0.19
VARS-215ENST00000375663 AFF1P51825 1210 aaKnown RBP16.26■□□□□ 0.19
VARS-215ENST00000375663 RGS1Q08116 209 aa16.26■□□□□ 0.19
VARS-215ENST00000375663 PCBP2Q15366 365 aaKnown RBP eCLIP16.26■□□□□ 0.19
VARS-215ENST00000375663 ZNHIT3Q15649 155 aaPredicted RBP16.26■□□□□ 0.19
VARS-215ENST00000375663 IDNKQ5T6J7 187 aa16.26■□□□□ 0.19
VARS-215ENST00000375663 PRSS48Q7RTY5 328 aa16.26■□□□□ 0.19
VARS-215ENST00000375663 RNF130Q86XS8 419 aa16.26■□□□□ 0.19
VARS-215ENST00000375663 FUNDC1Q8IVP5 155 aa16.26■□□□□ 0.19
VARS-215ENST00000375663 CMTM8Q8IZV2 173 aa16.26■□□□□ 0.19
VARS-215ENST00000375663 C17orf50Q8WW18 174 aa16.26■□□□□ 0.19
VARS-215ENST00000375663 NT5C3BQ969T7 300 aa16.26■□□□□ 0.19
VARS-215ENST00000375663 RNF38Q9H0F5 515 aa16.26■□□□□ 0.19
VARS-215ENST00000375663 DIABLOQ9NR28 239 aa16.26■□□□□ 0.19
VARS-215ENST00000375663 COCHO43405 550 aa16.26■□□□□ 0.19
VARS-215ENST00000375663 IFNGP01579 166 aa16.26■□□□□ 0.19
VARS-215ENST00000375663 PSMD4P55036 377 aaKnown RBP16.26■□□□□ 0.19
VARS-215ENST00000375663 PRR5P85299 388 aa16.26■□□□□ 0.19
VARS-215ENST00000375663 ANKDD1AQ495B1 522 aa16.26■□□□□ 0.19
VARS-215ENST00000375663 SMARCD3Q6STE5 483 aa16.26■□□□□ 0.19
VARS-215ENST00000375663 ZNF433Q8N7K0 673 aaPredicted RBP16.26■□□□□ 0.19
VARS-215ENST00000375663 SEC14L4Q9UDX3 406 aa16.26■□□□□ 0.19
VARS-215ENST00000375663 PRNPP04156 253 aa16.26■□□□□ 0.19
VARS-215ENST00000375663 HNF1BP35680 557 aa16.26■□□□□ 0.19
VARS-215ENST00000375663 PCDH1Q08174 1060 aa16.26■□□□□ 0.19
VARS-215ENST00000375663 LGALS3BPQ08380 585 aa16.26■□□□□ 0.19
VARS-215ENST00000375663 RAB41Q5JT25 222 aa16.26■□□□□ 0.19
VARS-215ENST00000375663 SERINC5Q86VE9 423 aa16.26■□□□□ 0.19
VARS-215ENST00000375663 CHDHQ8NE62 594 aaPredicted RBP16.26■□□□□ 0.19
VARS-215ENST00000375663 SRFBP1Q8NEF9 429 aaKnown RBP16.26■□□□□ 0.19
VARS-215ENST00000375663 ZFP90Q8TF47 636 aa16.26■□□□□ 0.19
VARS-215ENST00000375663 FRMD6Q96NE9 622 aa16.26■□□□□ 0.19
VARS-215ENST00000375663 ZFP3Q96NJ6 502 aa16.26■□□□□ 0.19
VARS-215ENST00000375663 LMAN2LQ9H0V9 348 aa16.26■□□□□ 0.19
VARS-215ENST00000375663 OCEL1Q9H607 264 aa16.26■□□□□ 0.19
VARS-215ENST00000375663 FBXW2Q9UKT8 454 aa16.26■□□□□ 0.19
VARS-215ENST00000375663 USP22Q9UPT9 525 aa16.26■□□□□ 0.19
VARS-215ENST00000375663 A0A1W2PQ72 361 aa16.26■□□□□ 0.19
VARS-215ENST00000375663 MATN1P21941 496 aa16.26■□□□□ 0.19
VARS-215ENST00000375663 ADRA1AP35348 466 aa16.26■□□□□ 0.19
VARS-215ENST00000375663 PPIGQ13427 754 aaKnown RBP eCLIP16.26■□□□□ 0.194e-7■■■□□ 18
VARS-215ENST00000375663 MARCH9Q86YJ5 346 aa16.26■□□□□ 0.19
VARS-215ENST00000375663 FAM98AQ8NCA5 519 aaKnown RBP16.26■□□□□ 0.19
VARS-215ENST00000375663 NDNFQ8TB73 568 aa16.26■□□□□ 0.19
VARS-215ENST00000375663 BOCQ9BWV1 1114 aa16.26■□□□□ 0.19
VARS-215ENST00000375663 FARSBQ9NSD9 589 aaKnown RBP16.26■□□□□ 0.19
VARS-215ENST00000375663 SACM1LQ9NTJ5 587 aa16.26■□□□□ 0.19
VARS-215ENST00000375663 TMEM45AQ9NWC5 275 aa16.26■□□□□ 0.19
VARS-215ENST00000375663 B4GALT6Q9UBX8 382 aa16.26■□□□□ 0.19
VARS-215ENST00000375663 DLGAP4Q9Y2H0 992 aa16.26■□□□□ 0.19
VARS-215ENST00000375663 GRXCR2A6NFK2 248 aa16.25■□□□□ 0.19
VARS-215ENST00000375663 CPSF4LA6NMK7 179 aaKnown RBP16.25■□□□□ 0.19
VARS-215ENST00000375663 ARNTLO00327 626 aa16.25■□□□□ 0.19
VARS-215ENST00000375663 SOCS7O14512 581 aa16.25■□□□□ 0.19
VARS-215ENST00000375663 OR10H2O60403 315 aa16.25■□□□□ 0.19
VARS-215ENST00000375663 CKMT1AP12532 417 aa16.25■□□□□ 0.19
VARS-215ENST00000375663 NUP62P37198 522 aaPredicted RBP16.25■□□□□ 0.19
VARS-215ENST00000375663 NKX2-5P52952 324 aaPredicted RBP16.25■□□□□ 0.19
VARS-215ENST00000375663 KCNC4Q03721 635 aa16.25■□□□□ 0.19
VARS-215ENST00000375663 CSTF1Q05048 431 aaKnown RBP16.25■□□□□ 0.19
VARS-215ENST00000375663 ZNF763Q0D2J5 394 aa16.25■□□□□ 0.19
VARS-215ENST00000375663 APOFQ13790 326 aa16.25■□□□□ 0.19
VARS-215ENST00000375663 FAM220AQ7Z4H9 259 aa16.25■□□□□ 0.19
VARS-215ENST00000375663 PEX5LQ8IYB4 626 aa16.25■□□□□ 0.19
VARS-215ENST00000375663 CXorf40BQ96DE9 158 aa16.25■□□□□ 0.19
VARS-215ENST00000375663 YIPF4Q9BSR8 244 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms