RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 YIPF1Q9Y548 306 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 PRSS51A0A1B0GVH4 220 aa6.34□□□□□ -1.4
SMC1A-202ENST00000375340 QSOX1O00391 747 aa6.34□□□□□ -1.4
SMC1A-202ENST00000375340 BCKDHAP12694 445 aa6.34□□□□□ -1.4
SMC1A-202ENST00000375340 NUP62P37198 522 aaPredicted RBP6.34□□□□□ -1.4
SMC1A-202ENST00000375340 ARCN1P48444 511 aaKnown RBP6.34□□□□□ -1.4
SMC1A-202ENST00000375340 AFF1P51825 1210 aaKnown RBP6.34□□□□□ -1.4
SMC1A-202ENST00000375340 RPP38P78345 283 aaKnown RBP6.34□□□□□ -1.4
SMC1A-202ENST00000375340 SLC36A3Q495N2 470 aa6.34□□□□□ -1.4
SMC1A-202ENST00000375340 RHEBL1Q8TAI7 183 aa6.34□□□□□ -1.4
SMC1A-202ENST00000375340 JPH3Q8WXH2 748 aaPredicted RBP6.34□□□□□ -1.4
SMC1A-202ENST00000375340 RAB8BQ92930 207 aa6.34□□□□□ -1.4
SMC1A-202ENST00000375340 UCK2Q9BZX2 261 aa6.34□□□□□ -1.4
SMC1A-202ENST00000375340 OR10H1Q9Y4A9 318 aa6.34□□□□□ -1.4
SMC1A-202ENST00000375340 H0YJX3 145 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 ADH1CP00326 375 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 EBLN1P0CF75 366 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 GADD45AP24522 165 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 GABRB3P28472 473 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 MAT2AP31153 395 aaKnown RBP6.33□□□□□ -1.4
SMC1A-202ENST00000375340 CREMQ03060 361 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 PKDCCQ504Y2 493 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 THOC7Q6I9Y2 204 aaKnown RBP6.33□□□□□ -1.4
SMC1A-202ENST00000375340 MEX3DQ86XN8 651 aaKnown RBP6.33□□□□□ -1.4
SMC1A-202ENST00000375340 OR13J1Q8NGT2 312 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 FUBP3Q96I24 572 aaKnown RBP eCLIP6.33□□□□□ -1.44e-9■□□□□ 10.3
SMC1A-202ENST00000375340 LMLNQ96KR4 655 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 DEFB118Q96PH6 123 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 TRPS1Q9UHF7 1281 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 MAN2B2Q9Y2E5 1009 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 A0A0U1RQF3 1178 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 NOTOA8MTQ0 251 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 ALPPP05187 535 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 STSP08842 583 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 RGS8P57771 180 aaPredicted RBP6.33□□□□□ -1.4
SMC1A-202ENST00000375340 ZNF33AQ06730 810 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 NOXRED1Q6NXP6 359 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 PLEKHG7Q6ZR37 379 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 ADGRG5Q8IZF4 528 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 TMEM102Q8N9M5 508 aaPredicted RBP6.33□□□□□ -1.4
SMC1A-202ENST00000375340 GATAD2BQ8WXI9 593 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 RACGAP1Q9H0H5 632 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 FBXO10Q9UK96 956 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 ABCG2Q9UNQ0 655 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 USP3Q9Y6I4 520 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 PRSS21Q9Y6M0 314 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 TLX2O43763 284 aaPredicted RBP6.33□□□□□ -1.4
SMC1A-202ENST00000375340 OR6A2O95222 327 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 RAB36O95755 333 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 CSTF2P33240 577 aaKnown RBP eCLIP6.33□□□□□ -1.4
SMC1A-202ENST00000375340 ADRA1AP35348 466 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 NR4A2P43354 598 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 TUBB3Q13509 450 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 GDPD4Q6W3E5 623 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 CYP4V2Q6ZWL3 525 aaPredicted RBP6.33□□□□□ -1.4
SMC1A-202ENST00000375340 CLEC14AQ86T13 490 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 IFT27Q9BW83 186 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 EIF3KQ9UBQ5 218 aaKnown RBP6.33□□□□□ -1.4
SMC1A-202ENST00000375340 FEZF1A0PJY2 475 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 FAM92AA1XBS5 289 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 ARHGEF33A8MVX0 844 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 KIAA0513O60268 411 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 ADH1AP07327 375 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 PFKLP17858 780 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 RASSF6Q6ZTQ3 369 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 DNAJB7Q7Z6W7 309 aaPredicted RBP6.33□□□□□ -1.4
SMC1A-202ENST00000375340 MARCH9Q86YJ5 346 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 APCDD1Q8J025 514 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 SUN5Q8TC36 379 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 SH3RF2Q8TEC5 729 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 COL21A1Q96P44 957 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 WACQ9BTA9 647 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 IRF2BPLQ9H1B7 796 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 ENPP5Q9UJA9 477 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 A0A1B0GTW7 788 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 C1QTNF3-AMACRE9PGA6 284 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 NDUFS4O43181 175 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 DNTTP04053 509 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 FCER2P06734 321 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 CBSLP0DN79 551 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 BMP7P18075 431 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 CBSP35520 551 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 TBRG1Q3YBR2 411 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 SHQ1Q6PI26 577 aaKnown RBP6.33□□□□□ -1.4
SMC1A-202ENST00000375340 LARP4Q71RC2 724 aaKnown RBP eCLIP6.33□□□□□ -1.43e-11■□□□□ 8.9
SMC1A-202ENST00000375340 ARHGAP12Q8IWW6 846 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 SOHLH2Q9NX45 425 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 LCKP06239 509 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 ZNF181Q2M3W8 571 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 KIAA1324Q6UXG2 1013 aaKnown RBP6.33□□□□□ -1.4
SMC1A-202ENST00000375340 HSDL2Q6YN16 418 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 GALNT12Q8IXK2 581 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 IQCF1Q8N6M8 205 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 ZMIZ2Q8NF64 920 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 C2orf15Q8WU43 125 aaKnown RBP6.33□□□□□ -1.4
SMC1A-202ENST00000375340 TIFAQ96CG3 184 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 APIPQ96GX9 242 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 ZFP3Q96NJ6 502 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 KCNH6Q9H252 994 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 TMEM9Q9P0T7 183 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms