RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 IDSP22304 550 aa8.39□□□□□ -1.07
SNRNP40-202ENST00000373720 ITPKAP23677 461 aa8.39□□□□□ -1.07
SNRNP40-202ENST00000373720 NTSR1P30989 418 aa8.39□□□□□ -1.07
SNRNP40-202ENST00000373720 KDELR2P33947 212 aa8.39□□□□□ -1.07
SNRNP40-202ENST00000373720 PCGF2P35227 344 aa8.39□□□□□ -1.07
SNRNP40-202ENST00000373720 IL12RB1P42701 662 aa8.39□□□□□ -1.07
SNRNP40-202ENST00000373720 OR4D2P58180 307 aa8.39□□□□□ -1.07
SNRNP40-202ENST00000373720 MTPNP58546 118 aa8.39□□□□□ -1.07
SNRNP40-202ENST00000373720 ADARB1P78563 741 aaKnown RBP8.39□□□□□ -1.07
SNRNP40-202ENST00000373720 ROR2Q01974 943 aaKnown RBP8.39□□□□□ -1.07
SNRNP40-202ENST00000373720 TGM3Q08188 693 aa8.39□□□□□ -1.07
SNRNP40-202ENST00000373720 CNTN1Q12860 1018 aa8.39□□□□□ -1.07
SNRNP40-202ENST00000373720 KEAP1Q14145 624 aa8.39□□□□□ -1.07
SNRNP40-202ENST00000373720 NRF1Q16656 503 aa8.39□□□□□ -1.07
SNRNP40-202ENST00000373720 ZXDCQ2QGD7 858 aaPredicted RBP8.39□□□□□ -1.07
SNRNP40-202ENST00000373720 PGS1Q32NB8 556 aa8.39□□□□□ -1.07
SNRNP40-202ENST00000373720 HABP4Q5JVS0 413 aaKnown RBP8.39□□□□□ -1.07
SNRNP40-202ENST00000373720 DEPDC1Q5TB30 811 aa8.39□□□□□ -1.07
SNRNP40-202ENST00000373720 SHQ1Q6PI26 577 aaKnown RBP8.39□□□□□ -1.07
SNRNP40-202ENST00000373720 SLC30A9Q6PML9 568 aa8.39□□□□□ -1.07
SNRNP40-202ENST00000373720 GCNT7Q6ZNI0 430 aa8.39□□□□□ -1.07
SNRNP40-202ENST00000373720 EP400NLQ6ZTU2 488 aa8.39□□□□□ -1.07
SNRNP40-202ENST00000373720 CBLL1Q75N03 491 aa8.39□□□□□ -1.07
SNRNP40-202ENST00000373720 C11orf96Q7Z7L8 435 aa8.39□□□□□ -1.07
SNRNP40-202ENST00000373720 AMIGO2Q86SJ2 522 aa8.39□□□□□ -1.07
SNRNP40-202ENST00000373720 C12orf40Q86WS4 652 aa8.39□□□□□ -1.07
SNRNP40-202ENST00000373720 RALGPS2Q86X27 583 aaPredicted RBP8.39□□□□□ -1.07
SNRNP40-202ENST00000373720 FAM129CQ86XR2 697 aa8.39□□□□□ -1.07
SNRNP40-202ENST00000373720 MMAAQ8IVH4 418 aaKnown RBP8.39□□□□□ -1.07
SNRNP40-202ENST00000373720 CLEC4FQ8N1N0 589 aa8.39□□□□□ -1.07
SNRNP40-202ENST00000373720 DCBLD1Q8N8Z6 715 aa8.39□□□□□ -1.07
SNRNP40-202ENST00000373720 SORCS1Q8WY21 1168 aa8.39□□□□□ -1.07
SNRNP40-202ENST00000373720 FIG4Q92562 907 aa8.39□□□□□ -1.07
SNRNP40-202ENST00000373720 NR4A3Q92570 626 aa8.39□□□□□ -1.07
SNRNP40-202ENST00000373720 DNASE1L2Q92874 299 aa8.39□□□□□ -1.07
SNRNP40-202ENST00000373720 NEIL2Q969S2 332 aa8.39□□□□□ -1.07
SNRNP40-202ENST00000373720 PYCR2Q96C36 320 aa8.39□□□□□ -1.07
SNRNP40-202ENST00000373720 RSPRY1Q96DX4 576 aa8.39□□□□□ -1.07
SNRNP40-202ENST00000373720 APIPQ96GX9 242 aa8.39□□□□□ -1.07
SNRNP40-202ENST00000373720 OR4K3Q96R72 315 aa8.39□□□□□ -1.07
SNRNP40-202ENST00000373720 WRAP53Q9BUR4 548 aaKnown RBP8.39□□□□□ -1.07
SNRNP40-202ENST00000373720 ZDHHC5Q9C0B5 715 aa8.39□□□□□ -1.07
SNRNP40-202ENST00000373720 ROGDIQ9GZN7 287 aa8.39□□□□□ -1.07
SNRNP40-202ENST00000373720 REXO4Q9GZR2 422 aaKnown RBP8.39□□□□□ -1.07
SNRNP40-202ENST00000373720 SEMA6AQ9H2E6 1030 aa8.39□□□□□ -1.07
SNRNP40-202ENST00000373720 TPT1P8Q9HAU6 139 aa8.39□□□□□ -1.07
SNRNP40-202ENST00000373720 TIMMDC1Q9NPL8 285 aa8.39□□□□□ -1.07
SNRNP40-202ENST00000373720 DMRT3Q9NQL9 472 aa8.39□□□□□ -1.07
SNRNP40-202ENST00000373720 PAPOLBQ9NRJ5 636 aaKnown RBP8.39□□□□□ -1.07
SNRNP40-202ENST00000373720 ACSS1Q9NUB1 689 aaPredicted RBP8.39□□□□□ -1.07
SNRNP40-202ENST00000373720 TAS2R9Q9NYW1 312 aa8.39□□□□□ -1.07
SNRNP40-202ENST00000373720 SLC25A37Q9NYZ2 338 aa8.39□□□□□ -1.07
SNRNP40-202ENST00000373720 UBAP1Q9NZ09 502 aa8.39□□□□□ -1.07
SNRNP40-202ENST00000373720 SLAMF8Q9P0V8 285 aa8.39□□□□□ -1.07
SNRNP40-202ENST00000373720 ANKMY1Q9P2S6 941 aa8.39□□□□□ -1.07
SNRNP40-202ENST00000373720 ASF1AQ9Y294 204 aa8.39□□□□□ -1.07
SNRNP40-202ENST00000373720 DLGAP4Q9Y2H0 992 aa8.39□□□□□ -1.07
SNRNP40-202ENST00000373720 PCDHGB3Q9Y5G1 929 aa8.39□□□□□ -1.07
SNRNP40-202ENST00000373720 AK5Q9Y6K8 562 aa8.39□□□□□ -1.07
SNRNP40-202ENST00000373720 MUC22E2RYF6 1773 aaPredicted RBP8.39□□□□□ -1.07
SNRNP40-202ENST00000373720 BPTFQ12830 3046 aa8.39□□□□□ -1.07
SNRNP40-202ENST00000373720 KIAA1549LQ6ZVL6 1849 aa8.38□□□□□ -1.07
SNRNP40-202ENST00000373720 PCNTO95613 3336 aa8.38□□□□□ -1.07
SNRNP40-202ENST00000373720 TMEM247A6NEH6 219 aa8.38□□□□□ -1.07
SNRNP40-202ENST00000373720 ARRDC5A6NEK1 342 aa8.38□□□□□ -1.07
SNRNP40-202ENST00000373720 SOCS2O14508 198 aa8.38□□□□□ -1.07
SNRNP40-202ENST00000373720 PLRG1O43660 514 aaKnown RBP8.38□□□□□ -1.07
SNRNP40-202ENST00000373720 RNGTTO60942 597 aaKnown RBP8.38□□□□□ -1.07
SNRNP40-202ENST00000373720 MTX2O75431 263 aa8.38□□□□□ -1.07
SNRNP40-202ENST00000373720 PDE9AO76083 593 aa8.38□□□□□ -1.07
SNRNP40-202ENST00000373720 KCNK5O95279 499 aa8.38□□□□□ -1.07
SNRNP40-202ENST00000373720 FABP3P05413 133 aa8.38□□□□□ -1.07
SNRNP40-202ENST00000373720 IFI6P09912 130 aa8.38□□□□□ -1.07
SNRNP40-202ENST00000373720 ITGAMP11215 1152 aa8.38□□□□□ -1.07
SNRNP40-202ENST00000373720 CKMT2P17540 419 aa8.38□□□□□ -1.07
SNRNP40-202ENST00000373720 DNAJA1P31689 397 aaKnown RBP8.38□□□□□ -1.07
SNRNP40-202ENST00000373720 AHRP35869 848 aa8.38□□□□□ -1.07
SNRNP40-202ENST00000373720 SLC6A11P48066 632 aa8.38□□□□□ -1.07
SNRNP40-202ENST00000373720 ALDH3B2P48448 385 aa8.38□□□□□ -1.07
SNRNP40-202ENST00000373720 HLCSP50747 726 aa8.38□□□□□ -1.07
SNRNP40-202ENST00000373720 RAB28P51157 221 aa8.38□□□□□ -1.07
SNRNP40-202ENST00000373720 KIAA1024LP59773 190 aa8.38□□□□□ -1.07
SNRNP40-202ENST00000373720 YPEL5P62699 121 aa8.38□□□□□ -1.07
SNRNP40-202ENST00000373720 PPP2R2BQ00005 443 aa8.38□□□□□ -1.07
SNRNP40-202ENST00000373720 MYBPC1Q00872 1141 aa8.38□□□□□ -1.07
SNRNP40-202ENST00000373720 PON2Q15165 354 aa8.38□□□□□ -1.07
SNRNP40-202ENST00000373720 UGT8Q16880 541 aa8.38□□□□□ -1.07
SNRNP40-202ENST00000373720 AAK1Q2M2I8 961 aa8.38□□□□□ -1.07
SNRNP40-202ENST00000373720 C6orf52Q5T4I8 152 aa8.38□□□□□ -1.07
SNRNP40-202ENST00000373720 ZNF697Q5TEC3 545 aa8.38□□□□□ -1.07
SNRNP40-202ENST00000373720 THEMIS2Q5TEJ8 643 aa8.38□□□□□ -1.07
SNRNP40-202ENST00000373720 AGBL4Q5VU57 503 aa8.38□□□□□ -1.07
SNRNP40-202ENST00000373720 NAIF1Q69YI7 327 aaPredicted RBP8.38□□□□□ -1.07
SNRNP40-202ENST00000373720 TANGO2Q6ICL3 276 aa8.38□□□□□ -1.07
SNRNP40-202ENST00000373720 B3GNT6Q6ZMB0 384 aa8.38□□□□□ -1.07
SNRNP40-202ENST00000373720 ZNF621Q6ZSS3 439 aa8.38□□□□□ -1.07
SNRNP40-202ENST00000373720 RFLNAQ6ZTI6 216 aa8.38□□□□□ -1.07
SNRNP40-202ENST00000373720 GET4Q7L5D6 327 aaPredicted RBP8.38□□□□□ -1.07
SNRNP40-202ENST00000373720 GPR155Q7Z3F1 870 aa8.38□□□□□ -1.07
SNRNP40-202ENST00000373720 THAP5Q7Z6K1 395 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms