RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 MTCH2Q9Y6C9 303 aa18.82■□□□□ 0.6
HDAC1-201ENST00000373548 EVPLLA8MZ36 301 aa18.81■□□□□ 0.6
HDAC1-201ENST00000373548 KLHL18O94889 574 aa18.81■□□□□ 0.6
HDAC1-201ENST00000373548 DRD1P21728 446 aa18.81■□□□□ 0.6
HDAC1-201ENST00000373548 PHEXP78562 749 aa18.81■□□□□ 0.6
HDAC1-201ENST00000373548 COL19A1Q14993 1142 aa18.81■□□□□ 0.6
HDAC1-201ENST00000373548 IER5LQ5T953 404 aa18.81■□□□□ 0.6
HDAC1-201ENST00000373548 GPR155Q7Z3F1 870 aa18.81■□□□□ 0.6
HDAC1-201ENST00000373548 LINC01555Q8NAE3 123 aa18.81■□□□□ 0.6
HDAC1-201ENST00000373548 NCLNQ969V3 563 aa18.81■□□□□ 0.6
HDAC1-201ENST00000373548 UGT2B28Q9BY64 529 aa18.81■□□□□ 0.6
HDAC1-201ENST00000373548 CXorf56Q9H5V9 222 aa18.81■□□□□ 0.6
HDAC1-201ENST00000373548 CD93Q9NPY3 652 aa18.81■□□□□ 0.6
HDAC1-201ENST00000373548 WASH6PQ9NQA3 447 aa18.81■□□□□ 0.6
HDAC1-201ENST00000373548 TRPV5Q9NQA5 729 aa18.81■□□□□ 0.6
HDAC1-201ENST00000373548 ATP6V1HQ9UI12 483 aa18.81■□□□□ 0.6
HDAC1-201ENST00000373548 BTNL2Q9UIR0 455 aa18.81■□□□□ 0.6
HDAC1-201ENST00000373548 MOSPD1Q9UJG1 213 aa18.81■□□□□ 0.6
HDAC1-201ENST00000373548 HEATR5BQ9P2D3 2071 aa18.81■□□□□ 0.6
HDAC1-201ENST00000373548 CLOCKO15516 846 aa18.8■□□□□ 0.6
HDAC1-201ENST00000373548 EPN2O95208 641 aa18.8■□□□□ 0.6
HDAC1-201ENST00000373548 RASAL1O95294 804 aa18.8■□□□□ 0.6
HDAC1-201ENST00000373548 RETP07949 1114 aa18.8■□□□□ 0.6
HDAC1-201ENST00000373548 TXNL4AP83876 142 aaKnown RBP18.8■□□□□ 0.6
HDAC1-201ENST00000373548 MYBPC1Q00872 1141 aa18.8■□□□□ 0.6
HDAC1-201ENST00000373548 GRSF1Q12849 480 aaKnown RBP eCLIP18.8■□□□□ 0.6
HDAC1-201ENST00000373548 RBBP5Q15291 538 aaKnown RBP18.8■□□□□ 0.6
HDAC1-201ENST00000373548 ZNF385BQ569K4 471 aa18.8■□□□□ 0.6
HDAC1-201ENST00000373548 NETO1Q8TDF5 533 aa18.8■□□□□ 0.6
HDAC1-201ENST00000373548 PRPF18Q99633 342 aaKnown RBP18.8■□□□□ 0.6
HDAC1-201ENST00000373548 NTN4Q9HB63 628 aa18.8■□□□□ 0.6
HDAC1-201ENST00000373548 DCAF13Q9NV06 445 aaKnown RBP18.8■□□□□ 0.6
HDAC1-201ENST00000373548 RNF103-CHMP3A0A140T963 221 aa18.8■□□□□ 0.6
HDAC1-201ENST00000373548 CACNB4O00305 520 aaPredicted RBP18.8■□□□□ 0.6
HDAC1-201ENST00000373548 GPX2P18283 190 aa18.8■□□□□ 0.6
HDAC1-201ENST00000373548 PTX3P26022 381 aaPredicted RBP18.8■□□□□ 0.6
HDAC1-201ENST00000373548 MRPS21P82921 87 aaKnown RBP18.8■□□□□ 0.6
HDAC1-201ENST00000373548 CLCA4Q14CN2 919 aa18.8■□□□□ 0.6
HDAC1-201ENST00000373548 ISLR2Q6UXK2 745 aa18.8■□□□□ 0.6
HDAC1-201ENST00000373548 SERPINA11Q86U17 422 aa18.8■□□□□ 0.6
HDAC1-201ENST00000373548 CARM1Q86X55 608 aa18.8■□□□□ 0.6
HDAC1-201ENST00000373548 ST13P4Q8IZP2 240 aaPredicted RBP18.8■□□□□ 0.6
HDAC1-201ENST00000373548 ABHD11Q8NFV4 315 aa18.8■□□□□ 0.6
HDAC1-201ENST00000373548 C16orf78Q8WTQ4 265 aa18.8■□□□□ 0.6
HDAC1-201ENST00000373548 SNX19Q92543 992 aa18.8■□□□□ 0.6
HDAC1-201ENST00000373548 CXorf40BQ96DE9 158 aa18.8■□□□□ 0.6
HDAC1-201ENST00000373548 VPS50Q96JG6 964 aa18.8■□□□□ 0.6
HDAC1-201ENST00000373548 MRGPRX1Q96LB2 322 aa18.8■□□□□ 0.6
HDAC1-201ENST00000373548 CAMK1GQ96NX5 476 aa18.8■□□□□ 0.6
HDAC1-201ENST00000373548 BDH2Q9BUT1 245 aa18.8■□□□□ 0.6
HDAC1-201ENST00000373548 PCBD2Q9H0N5 130 aa18.8■□□□□ 0.6
HDAC1-201ENST00000373548 REEP4Q9H6H4 257 aa18.8■□□□□ 0.6
HDAC1-201ENST00000373548 IMP3Q9NV31 184 aaKnown RBP18.8■□□□□ 0.6
HDAC1-201ENST00000373548 SH3BP4Q9P0V3 963 aa18.8■□□□□ 0.6
HDAC1-201ENST00000373548 ZNF639Q9UID6 485 aa18.8■□□□□ 0.6
HDAC1-201ENST00000373548 GPSM3Q9Y4H4 160 aa18.8■□□□□ 0.6
HDAC1-201ENST00000373548 EI24O14681 340 aa18.79■□□□□ 0.6
HDAC1-201ENST00000373548 PRKD3O94806 890 aa18.79■□□□□ 0.6
HDAC1-201ENST00000373548 PRSS23O95084 383 aa18.79■□□□□ 0.6
HDAC1-201ENST00000373548 TBX6O95947 436 aaPredicted RBP18.79■□□□□ 0.6
HDAC1-201ENST00000373548 BMP8BP34820 402 aa18.79■□□□□ 0.6
HDAC1-201ENST00000373548 ANXA8L1Q5VT79 327 aa18.79■□□□□ 0.6
HDAC1-201ENST00000373548 USP30Q70CQ3 517 aa18.79■□□□□ 0.6
HDAC1-201ENST00000373548 ANKRD53Q8N9V6 530 aa18.79■□□□□ 0.6
HDAC1-201ENST00000373548 PHF12Q96QT6 1004 aa18.79■□□□□ 0.6
HDAC1-201ENST00000373548 AIF1LQ9BQI0 150 aa18.79■□□□□ 0.6
HDAC1-201ENST00000373548 RHBGQ9H310 441 aa18.79■□□□□ 0.6
HDAC1-201ENST00000373548 FGF22Q9HCT0 170 aa18.79■□□□□ 0.6
HDAC1-201ENST00000373548 MYNNQ9NPC7 610 aa18.79■□□□□ 0.6
HDAC1-201ENST00000373548 C8orf4Q9NR00 106 aa18.79■□□□□ 0.6
HDAC1-201ENST00000373548 PCDHB11Q9Y5F2 797 aa18.79■□□□□ 0.6
HDAC1-201ENST00000373548 C2CD4DB7Z1M9 353 aa18.79■□□□□ 0.6
HDAC1-201ENST00000373548 UPK1AO00322 258 aa18.79■□□□□ 0.6
HDAC1-201ENST00000373548 SCAMP1O15126 338 aa18.79■□□□□ 0.6
HDAC1-201ENST00000373548 KLK1P06870 262 aa18.79■□□□□ 0.6
HDAC1-201ENST00000373548 FAM58BPP0C7Q3 252 aa18.79■□□□□ 0.6
HDAC1-201ENST00000373548 MC1RQ01726 317 aa18.79■□□□□ 0.6
HDAC1-201ENST00000373548 VPS37AQ8NEZ2 397 aa18.79■□□□□ 0.6
HDAC1-201ENST00000373548 ASB12Q8WXK4 309 aa18.79■□□□□ 0.6
HDAC1-201ENST00000373548 TFAP2CQ92754 450 aa18.79■□□□□ 0.6
HDAC1-201ENST00000373548 SLC47A1Q96FL8 570 aa18.79■□□□□ 0.6
HDAC1-201ENST00000373548 SCARF2Q96GP6 870 aaPredicted RBP18.79■□□□□ 0.6
HDAC1-201ENST00000373548 C8orf33Q9H7E9 229 aaPredicted RBP18.79■□□□□ 0.6
HDAC1-201ENST00000373548 UTS2RQ9UKP6 389 aa18.79■□□□□ 0.6
HDAC1-201ENST00000373548 NCKAP1Q9Y2A7 1128 aa18.79■□□□□ 0.6
HDAC1-201ENST00000373548 C1orf226A1L170 272 aa18.78■□□□□ 0.6
HDAC1-201ENST00000373548 POM121BA6NF01 834 aa18.78■□□□□ 0.6
HDAC1-201ENST00000373548 KCNJ13O60928 360 aa18.78■□□□□ 0.6
HDAC1-201ENST00000373548 DEAF1O75398 565 aaPredicted RBP18.78■□□□□ 0.6
HDAC1-201ENST00000373548 KCNK5O95279 499 aa18.78■□□□□ 0.6
HDAC1-201ENST00000373548 SERPINA1P01009 418 aa18.78■□□□□ 0.6
HDAC1-201ENST00000373548 C7P10643 843 aa18.78■□□□□ 0.6
HDAC1-201ENST00000373548 CCR8P51685 355 aa18.78■□□□□ 0.6
HDAC1-201ENST00000373548 REEP5Q00765 189 aa18.78■□□□□ 0.6
HDAC1-201ENST00000373548 PDE7AQ13946 482 aa18.78■□□□□ 0.6
HDAC1-201ENST00000373548 FAM71E1Q6IPT2 247 aa18.78■□□□□ 0.6
HDAC1-201ENST00000373548 ZCCHC8Q6NZY4 707 aaKnown RBP18.78■□□□□ 0.6
HDAC1-201ENST00000373548 TMEM92Q6UXU6 159 aa18.78■□□□□ 0.6
HDAC1-201ENST00000373548 SLC9B2Q86UD5 537 aa18.78■□□□□ 0.6
HDAC1-201ENST00000373548 APLFQ8IW19 511 aaPredicted RBP18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms