RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 CDH11P55287 796 aa11.2□□□□□ -0.62
VCL-202ENST00000372755 KCNC3Q14003 757 aa11.2□□□□□ -0.62
VCL-202ENST00000372755 DSG2Q14126 1118 aa11.2□□□□□ -0.62
VCL-202ENST00000372755 LRIF1Q5T3J3 769 aa11.2□□□□□ -0.62
VCL-202ENST00000372755 CEACAM20Q6UY09 585 aa11.2□□□□□ -0.62
VCL-202ENST00000372755 SLC5A11Q8WWX8 675 aa11.2□□□□□ -0.62
VCL-202ENST00000372755 MOAP1Q96BY2 351 aa11.2□□□□□ -0.62
VCL-202ENST00000372755 S100A16Q96FQ6 103 aaKnown RBP11.2□□□□□ -0.62
VCL-202ENST00000372755 CMKLR1Q99788 373 aa11.2□□□□□ -0.62
VCL-202ENST00000372755 TOR3AQ9H497 397 aa11.2□□□□□ -0.62
VCL-202ENST00000372755 AMBNQ9NP70 447 aa11.2□□□□□ -0.62
VCL-202ENST00000372755 COL20A1Q9P218 1284 aa11.2□□□□□ -0.62
VCL-202ENST00000372755 LOC100130705A0A1B0GUX0 176 aa11.2□□□□□ -0.62
VCL-202ENST00000372755 OR6C70A6NIJ9 312 aa11.2□□□□□ -0.62
VCL-202ENST00000372755 VAMP1P23763 118 aa11.2□□□□□ -0.62
VCL-202ENST00000372755 GRK1Q15835 563 aa11.2□□□□□ -0.62
VCL-202ENST00000372755 SSX6Q7RTT6 188 aa11.2□□□□□ -0.62
VCL-202ENST00000372755 AQP11Q8NBQ7 271 aa11.2□□□□□ -0.62
VCL-202ENST00000372755 STOML3Q8TAV4 291 aa11.2□□□□□ -0.62
VCL-202ENST00000372755 RBP7Q96R05 134 aa11.2□□□□□ -0.62
VCL-202ENST00000372755 NTPCRQ9BSD7 190 aaKnown RBP11.2□□□□□ -0.62
VCL-202ENST00000372755 COQ4Q9Y3A0 265 aa11.2□□□□□ -0.62
VCL-202ENST00000372755 ZNF536O15090 1300 aa11.2□□□□□ -0.62
VCL-202ENST00000372755 KHNYNO15037 678 aaKnown RBP11.2□□□□□ -0.62
VCL-202ENST00000372755 VNN2O95498 520 aa11.2□□□□□ -0.62
VCL-202ENST00000372755 JUNP05412 331 aaKnown RBP11.2□□□□□ -0.62
VCL-202ENST00000372755 EBLN1P0CF75 366 aa11.2□□□□□ -0.62
VCL-202ENST00000372755 GSTT2P0CG29 244 aa11.2□□□□□ -0.62
VCL-202ENST00000372755 PHC1P78364 1004 aa11.2□□□□□ -0.62
VCL-202ENST00000372755 SYPL2Q5VXT5 272 aa11.2□□□□□ -0.62
VCL-202ENST00000372755 TIGD4Q8IY51 512 aa11.2□□□□□ -0.62
VCL-202ENST00000372755 ZNF366Q8N895 744 aa11.2□□□□□ -0.62
VCL-202ENST00000372755 SLC35B2Q8TB61 432 aa11.2□□□□□ -0.62
VCL-202ENST00000372755 DERL2Q9GZP9 239 aa11.2□□□□□ -0.62
VCL-202ENST00000372755 SLC2A4RGQ9NR83 387 aa11.2□□□□□ -0.62
VCL-202ENST00000372755 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.2□□□□□ -0.62
VCL-202ENST00000372755 EXOSC1Q9Y3B2 195 aaKnown RBP11.2□□□□□ -0.62
VCL-202ENST00000372755 NOP16Q9Y3C1 178 aaKnown RBP11.2□□□□□ -0.62
VCL-202ENST00000372755 FAM159BA6NKW6 160 aa11.2□□□□□ -0.62
VCL-202ENST00000372755 HSPA12AO43301 675 aa11.2□□□□□ -0.62
VCL-202ENST00000372755 TRAPPC6AO75865 159 aa11.2□□□□□ -0.62
VCL-202ENST00000372755 MATN1P21941 496 aa11.2□□□□□ -0.62
VCL-202ENST00000372755 EVX2Q03828 476 aa11.2□□□□□ -0.62
VCL-202ENST00000372755 SEMA3AQ14563 771 aa11.2□□□□□ -0.62
VCL-202ENST00000372755 SH3PXD2AQ5TCZ1 1133 aa11.2□□□□□ -0.62
VCL-202ENST00000372755 GPAT4Q86UL3 456 aa11.2□□□□□ -0.62
VCL-202ENST00000372755 MFSD2AQ8NA29 543 aa11.2□□□□□ -0.62
VCL-202ENST00000372755 PHOSPHO1Q8TCT1 267 aa11.2□□□□□ -0.62
VCL-202ENST00000372755 BORCS8Q96FH0 119 aa11.2□□□□□ -0.62
VCL-202ENST00000372755 SLC5A7Q9GZV3 580 aa11.2□□□□□ -0.62
VCL-202ENST00000372755 APOL3O95236 402 aa11.19□□□□□ -0.62
VCL-202ENST00000372755 ANXA3P12429 323 aa11.19□□□□□ -0.62
VCL-202ENST00000372755 BCKDHAP12694 445 aa11.19□□□□□ -0.62
VCL-202ENST00000372755 HSD3B2P26439 372 aa11.19□□□□□ -0.62
VCL-202ENST00000372755 ARRB1P49407 418 aaPredicted RBP11.19□□□□□ -0.62
VCL-202ENST00000372755 IRF5Q13568 498 aa11.19□□□□□ -0.62
VCL-202ENST00000372755 DENND6BQ8NEG7 585 aa11.19□□□□□ -0.62
VCL-202ENST00000372755 GNPDA2Q8TDQ7 276 aa11.19□□□□□ -0.62
VCL-202ENST00000372755 NPLQ9BXD5 320 aaPredicted RBP11.19□□□□□ -0.62
VCL-202ENST00000372755 PCDH10Q9P2E7 1040 aa11.19□□□□□ -0.62
VCL-202ENST00000372755 SEC14L4Q9UDX3 406 aa11.19□□□□□ -0.62
VCL-202ENST00000372755 GMEB2Q9UKD1 530 aa11.19□□□□□ -0.62
VCL-202ENST00000372755 CMAHPQ9Y471 501 aa11.19□□□□□ -0.62
VCL-202ENST00000372755 SIX3O95343 332 aaPredicted RBP11.19□□□□□ -0.62
VCL-202ENST00000372755 NPPAP01160 153 aa11.19□□□□□ -0.62
VCL-202ENST00000372755 LHCGRP22888 699 aa11.19□□□□□ -0.62
VCL-202ENST00000372755 IST1P53990 364 aa11.19□□□□□ -0.62
VCL-202ENST00000372755 LRRC66Q68CR7 880 aa11.19□□□□□ -0.62
VCL-202ENST00000372755 NAPRTQ6XQN6 538 aa11.19□□□□□ -0.62
VCL-202ENST00000372755 FOXRED2Q8IWF2 684 aa11.19□□□□□ -0.62
VCL-202ENST00000372755 MTMR14Q8NCE2 650 aa11.19□□□□□ -0.62
VCL-202ENST00000372755 CANT1Q8WVQ1 401 aa11.19□□□□□ -0.62
VCL-202ENST00000372755 TFGQ92734 400 aaPredicted RBP11.19□□□□□ -0.62
VCL-202ENST00000372755 OSTF1Q92882 214 aa11.19□□□□□ -0.62
VCL-202ENST00000372755 TMEM203Q969S6 136 aa11.19□□□□□ -0.62
VCL-202ENST00000372755 TMEM125Q96AQ2 219 aa11.19□□□□□ -0.62
VCL-202ENST00000372755 HSH2DQ96JZ2 352 aa11.19□□□□□ -0.62
VCL-202ENST00000372755 ALPK1Q96QP1 1244 aa11.19□□□□□ -0.62
VCL-202ENST00000372755 TTYH3Q9C0H2 523 aa11.19□□□□□ -0.62
VCL-202ENST00000372755 SCP2D1Q9UJQ7 156 aa11.19□□□□□ -0.62
VCL-202ENST00000372755 SERTAD3Q9UJW9 196 aa11.19□□□□□ -0.62
VCL-202ENST00000372755 INSL6Q9Y581 213 aa11.19□□□□□ -0.62
VCL-202ENST00000372755 SELENOVP59797 346 aa11.19□□□□□ -0.62
VCL-202ENST00000372755 ABHD18Q0P651 414 aa11.19□□□□□ -0.62
VCL-202ENST00000372755 MAB21L1Q13394 359 aa11.19□□□□□ -0.62
VCL-202ENST00000372755 ACSBG2Q5FVE4 666 aa11.19□□□□□ -0.62
VCL-202ENST00000372755 CNKSR3Q6P9H4 555 aa11.19□□□□□ -0.62
VCL-202ENST00000372755 OR4F6Q8NGB9 312 aa11.19□□□□□ -0.62
VCL-202ENST00000372755 C11orf49Q9H6J7 331 aa11.19□□□□□ -0.62
VCL-202ENST00000372755 SALL4Q9UJQ4 1053 aa11.19□□□□□ -0.62
VCL-202ENST00000372755 CHRNA1P02708 482 aa11.19□□□□□ -0.62
VCL-202ENST00000372755 MT-ND5P03915 603 aa11.19□□□□□ -0.62
VCL-202ENST00000372755 ACRP10323 421 aa11.19□□□□□ -0.62
VCL-202ENST00000372755 SLC15A1P46059 708 aa11.19□□□□□ -0.62
VCL-202ENST00000372755 MLIPQ5VWP3 458 aa11.19□□□□□ -0.62
VCL-202ENST00000372755 C3orf33Q6P1S2 294 aa11.19□□□□□ -0.62
VCL-202ENST00000372755 SLC2A7Q6PXP3 512 aa11.19□□□□□ -0.62
VCL-202ENST00000372755 HSDL2Q6YN16 418 aa11.19□□□□□ -0.62
VCL-202ENST00000372755 TPRG1Q6ZUI0 275 aa11.19□□□□□ -0.62
VCL-202ENST00000372755 NPAS3Q8IXF0 933 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms