RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 BCAS3Q9H6U6 928 aa13.67□□□□□ -0.22
RAPGEF1-202ENST00000372190 SH2B3Q9UQQ2 575 aa13.67□□□□□ -0.22
RAPGEF1-202ENST00000372190 DLGAP4Q9Y2H0 992 aa13.67□□□□□ -0.22
RAPGEF1-202ENST00000372190 OR10H1Q9Y4A9 318 aa13.67□□□□□ -0.22
RAPGEF1-202ENST00000372190 TEX13DA0A0J9YY54 714 aaPredicted RBP13.66□□□□□ -0.22
RAPGEF1-202ENST00000372190 GTPBP1O00178 669 aaKnown RBP13.66□□□□□ -0.22
RAPGEF1-202ENST00000372190 LINC00032P0C843 101 aa13.66□□□□□ -0.22
RAPGEF1-202ENST00000372190 CSTF2P33240 577 aaKnown RBP eCLIP13.66□□□□□ -0.22
RAPGEF1-202ENST00000372190 COL9A3Q14050 684 aaPredicted RBP13.66□□□□□ -0.22
RAPGEF1-202ENST00000372190 EML3Q32P44 896 aa13.66□□□□□ -0.22
RAPGEF1-202ENST00000372190 TXNDC8Q6A555 127 aa13.66□□□□□ -0.22
RAPGEF1-202ENST00000372190 SIAH1Q8IUQ4 282 aa13.66□□□□□ -0.22
RAPGEF1-202ENST00000372190 ALG3Q92685 438 aa13.66□□□□□ -0.22
RAPGEF1-202ENST00000372190 ZNF578Q96N58 590 aaPredicted RBP13.66□□□□□ -0.22
RAPGEF1-202ENST00000372190 SULT4A1Q9BR01 284 aa13.66□□□□□ -0.22
RAPGEF1-202ENST00000372190 BCO2Q9BYV7 579 aa13.66□□□□□ -0.22
RAPGEF1-202ENST00000372190 ACTR6Q9GZN1 396 aa13.66□□□□□ -0.22
RAPGEF1-202ENST00000372190 FAM83DQ9H4H8 585 aa13.66□□□□□ -0.22
RAPGEF1-202ENST00000372190 MEAF6Q9HAF1 191 aa13.66□□□□□ -0.22
RAPGEF1-202ENST00000372190 MYNNQ9NPC7 610 aa13.66□□□□□ -0.22
RAPGEF1-202ENST00000372190 TDP1Q9NUW8 608 aa13.66□□□□□ -0.22
RAPGEF1-202ENST00000372190 LRFN1Q9P244 771 aa13.66□□□□□ -0.22
RAPGEF1-202ENST00000372190 IL36AQ9UHA7 158 aa13.66□□□□□ -0.22
RAPGEF1-202ENST00000372190 PLLPQ9Y342 182 aa13.66□□□□□ -0.22
RAPGEF1-202ENST00000372190 AZIN1O14977 448 aa13.66□□□□□ -0.22
RAPGEF1-202ENST00000372190 MFSD11O43934 449 aa13.66□□□□□ -0.22
RAPGEF1-202ENST00000372190 ARHGEF15O94989 841 aa13.66□□□□□ -0.22
RAPGEF1-202ENST00000372190 PROS1P07225 676 aa13.66□□□□□ -0.22
RAPGEF1-202ENST00000372190 HNRNPLP14866 589 aaKnown RBP eCLIP13.66□□□□□ -0.22
RAPGEF1-202ENST00000372190 CPN2P22792 545 aa13.66□□□□□ -0.22
RAPGEF1-202ENST00000372190 ENAMQ9NRM1 1142 aa13.66□□□□□ -0.22
RAPGEF1-202ENST00000372190 PCDHGB1Q9Y5G3 927 aa13.66□□□□□ -0.22
RAPGEF1-202ENST00000372190 SPIN1Q9Y657 262 aaPredicted RBP13.66□□□□□ -0.22
RAPGEF1-202ENST00000372190 SPEF2Q9C093 1822 aa13.66□□□□□ -0.22
RAPGEF1-202ENST00000372190 TRAV6A0A075B6T7 132 aa13.66□□□□□ -0.22
RAPGEF1-202ENST00000372190 CCNB2O95067 398 aa13.66□□□□□ -0.22
RAPGEF1-202ENST00000372190 GKN3PP0CG01 181 aa13.66□□□□□ -0.22
RAPGEF1-202ENST00000372190 VEGFCP49767 419 aa13.66□□□□□ -0.22
RAPGEF1-202ENST00000372190 XKR4Q5GH76 650 aa13.66□□□□□ -0.22
RAPGEF1-202ENST00000372190 NLRP8Q86W28 1048 aa13.66□□□□□ -0.22
RAPGEF1-202ENST00000372190 CNTD1Q8N815 330 aa13.66□□□□□ -0.22
RAPGEF1-202ENST00000372190 FAXDC2Q96IV6 333 aa13.66□□□□□ -0.22
RAPGEF1-202ENST00000372190 PCDHB18PQ96TA0 734 aa13.66□□□□□ -0.22
RAPGEF1-202ENST00000372190 TAS2R9Q9NYW1 312 aa13.66□□□□□ -0.22
RAPGEF1-202ENST00000372190 FBXL3Q9UKT7 428 aa13.66□□□□□ -0.22
RAPGEF1-202ENST00000372190 RIMKLBQ9ULI2 386 aa13.66□□□□□ -0.22
RAPGEF1-202ENST00000372190 TLR6Q9Y2C9 796 aa13.66□□□□□ -0.22
RAPGEF1-202ENST00000372190 INSIG1O15503 277 aa13.66□□□□□ -0.22
RAPGEF1-202ENST00000372190 TSPAN8P19075 237 aa13.66□□□□□ -0.22
RAPGEF1-202ENST00000372190 CAMLGP49069 296 aa13.66□□□□□ -0.22
RAPGEF1-202ENST00000372190 CXCR3P49682 368 aa13.66□□□□□ -0.22
RAPGEF1-202ENST00000372190 ZNF616Q08AN1 781 aa13.66□□□□□ -0.22
RAPGEF1-202ENST00000372190 NDUFAF5Q5TEU4 345 aa13.66□□□□□ -0.22
RAPGEF1-202ENST00000372190 UBE2R2Q712K3 238 aaPredicted RBP13.66□□□□□ -0.22
RAPGEF1-202ENST00000372190 ADAMTSL2Q86TH1 951 aa13.66□□□□□ -0.22
RAPGEF1-202ENST00000372190 OR5T2Q8NGG2 359 aa13.66□□□□□ -0.22
RAPGEF1-202ENST00000372190 ZNF420Q8TAQ5 688 aaPredicted RBP13.66□□□□□ -0.22
RAPGEF1-202ENST00000372190 LINGO1Q96FE5 620 aa13.66□□□□□ -0.22
RAPGEF1-202ENST00000372190 CPNE2Q96FN4 548 aaPredicted RBP13.66□□□□□ -0.22
RAPGEF1-202ENST00000372190 USP29Q9HBJ7 922 aa13.66□□□□□ -0.22
RAPGEF1-202ENST00000372190 SEMA3GQ9NS98 782 aa13.66□□□□□ -0.22
RAPGEF1-202ENST00000372190 IRAK2O43187 625 aa13.66□□□□□ -0.22
RAPGEF1-202ENST00000372190 RPP40O75818 363 aaKnown RBP13.66□□□□□ -0.22
RAPGEF1-202ENST00000372190 SCELO95171 688 aa13.66□□□□□ -0.22
RAPGEF1-202ENST00000372190 CD9P21926 228 aa13.66□□□□□ -0.22
RAPGEF1-202ENST00000372190 ITPKAP23677 461 aa13.66□□□□□ -0.22
RAPGEF1-202ENST00000372190 MSX2P35548 267 aaPredicted RBP13.66□□□□□ -0.22
RAPGEF1-202ENST00000372190 NDUFA9Q16795 377 aa13.66□□□□□ -0.22
RAPGEF1-202ENST00000372190 TEX44Q53QW1 395 aa13.66□□□□□ -0.22
RAPGEF1-202ENST00000372190 ARHGAP11AQ6P4F7 1023 aa13.66□□□□□ -0.22
RAPGEF1-202ENST00000372190 ARL14Q8N4G2 192 aa13.66□□□□□ -0.22
RAPGEF1-202ENST00000372190 ZNF808Q8N4W9 903 aaPredicted RBP13.66□□□□□ -0.22
RAPGEF1-202ENST00000372190 CPSF7Q8N684 471 aaKnown RBP13.66□□□□□ -0.22
RAPGEF1-202ENST00000372190 OR4Q3Q8NH05 313 aa13.66□□□□□ -0.22
RAPGEF1-202ENST00000372190 ASPNQ9BXN1 380 aa13.66□□□□□ -0.22
RAPGEF1-202ENST00000372190 MRPS33Q9Y291 106 aaKnown RBP13.66□□□□□ -0.22
RAPGEF1-202ENST00000372190 ST14Q9Y5Y6 855 aa13.66□□□□□ -0.22
RAPGEF1-202ENST00000372190 ELOVL7A1L3X0 281 aa13.65□□□□□ -0.22
RAPGEF1-202ENST00000372190 RNF225M0QZC1 329 aaPredicted RBP13.65□□□□□ -0.22
RAPGEF1-202ENST00000372190 ARPC2O15144 300 aa13.65□□□□□ -0.22
RAPGEF1-202ENST00000372190 OAZ2O95190 189 aa13.65□□□□□ -0.22
RAPGEF1-202ENST00000372190 L1CAMP32004 1257 aa13.65□□□□□ -0.22
RAPGEF1-202ENST00000372190 CASRP41180 1078 aa13.65□□□□□ -0.22
RAPGEF1-202ENST00000372190 RPIAP49247 311 aa13.65□□□□□ -0.22
RAPGEF1-202ENST00000372190 NPTX1Q15818 432 aa13.65□□□□□ -0.22
RAPGEF1-202ENST00000372190 IQCCQ4KMZ1 466 aa13.65□□□□□ -0.22
RAPGEF1-202ENST00000372190 CARD16Q5EG05 197 aa13.65□□□□□ -0.22
RAPGEF1-202ENST00000372190 SERINC5Q86VE9 423 aa13.65□□□□□ -0.22
RAPGEF1-202ENST00000372190 GTPBP8Q8N3Z3 284 aaPredicted RBP13.65□□□□□ -0.22
RAPGEF1-202ENST00000372190 SLC44A1Q8WWI5 657 aa13.65□□□□□ -0.22
RAPGEF1-202ENST00000372190 C7orf26Q96N11 449 aa13.65□□□□□ -0.22
RAPGEF1-202ENST00000372190 NMUR2Q9GZQ4 415 aa13.65□□□□□ -0.22
RAPGEF1-202ENST00000372190 SNX10Q9Y5X0 201 aa13.65□□□□□ -0.22
RAPGEF1-202ENST00000372190 ZNF878C9JN71 531 aa13.65□□□□□ -0.22
RAPGEF1-202ENST00000372190 NDST3O95803 873 aa13.65□□□□□ -0.22
RAPGEF1-202ENST00000372190 CAPN3P20807 821 aa13.65□□□□□ -0.22
RAPGEF1-202ENST00000372190 ALAS2P22557 587 aa13.65□□□□□ -0.22
RAPGEF1-202ENST00000372190 ENTPD1P49961 510 aa13.65□□□□□ -0.22
RAPGEF1-202ENST00000372190 GNMTQ14749 295 aa13.65□□□□□ -0.22
RAPGEF1-202ENST00000372190 CLVS2Q5SYC1 327 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms