RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 HOXA11P31270 313 aaPredicted RBP19.04■□□□□ 0.64
LMO4-202ENST00000370544 TXNL4AP83876 142 aaKnown RBP19.04■□□□□ 0.64
LMO4-202ENST00000370544 SCAPQ12770 1279 aa19.04■□□□□ 0.64
LMO4-202ENST00000370544 CMTR2Q8IYT2 770 aaKnown RBP19.04■□□□□ 0.64
LMO4-202ENST00000370544 HAVCR1Q96D42 359 aa19.04■□□□□ 0.64
LMO4-202ENST00000370544 MAPKAP1Q9BPZ7 522 aa19.04■□□□□ 0.64
LMO4-202ENST00000370544 DLGAP4Q9Y2H0 992 aa19.04■□□□□ 0.64
LMO4-202ENST00000370544 LOC100130705A0A1B0GUX0 176 aa19.04■□□□□ 0.64
LMO4-202ENST00000370544 TRIM3O75382 744 aaPredicted RBP19.04■□□□□ 0.64
LMO4-202ENST00000370544 INAVAQ3KP66 663 aa19.04■□□□□ 0.64
LMO4-202ENST00000370544 OARD1Q9Y530 152 aa19.04■□□□□ 0.64
LMO4-202ENST00000370544 STC2O76061 302 aa19.04■□□□□ 0.64
LMO4-202ENST00000370544 RCBTB2O95199 551 aa19.04■□□□□ 0.64
LMO4-202ENST00000370544 HNRNPA1P09651 372 aaKnown RBP eCLIP19.04■□□□□ 0.64
LMO4-202ENST00000370544 MEF2AQ02078 507 aaPredicted RBP19.04■□□□□ 0.64
LMO4-202ENST00000370544 ST3GAL3Q11203 375 aa19.04■□□□□ 0.64
LMO4-202ENST00000370544 TECRLQ5HYJ1 363 aa19.04■□□□□ 0.64
LMO4-202ENST00000370544 TCEAL6Q6IPX3 200 aa19.04■□□□□ 0.64
LMO4-202ENST00000370544 RNF130Q86XS8 419 aa19.04■□□□□ 0.64
LMO4-202ENST00000370544 AQP11Q8NBQ7 271 aa19.04■□□□□ 0.64
LMO4-202ENST00000370544 P2RY13Q9BPV8 354 aa19.04■□□□□ 0.64
LMO4-202ENST00000370544 SPATA9Q9BWV2 254 aa19.04■□□□□ 0.64
LMO4-202ENST00000370544 LDHAL6BQ9BYZ2 381 aaPredicted RBP19.04■□□□□ 0.64
LMO4-202ENST00000370544 COMMD3Q9UBI1 195 aa19.04■□□□□ 0.64
LMO4-202ENST00000370544 PCDHGB1Q9Y5G3 927 aa19.04■□□□□ 0.64
LMO4-202ENST00000370544 E7ESA3 106 aa19.04■□□□□ 0.64
LMO4-202ENST00000370544 TSPAN6O43657 245 aa19.04■□□□□ 0.64
LMO4-202ENST00000370544 TACSTD2P09758 323 aa19.04■□□□□ 0.64
LMO4-202ENST00000370544 PPP1R8Q12972 351 aaKnown RBP19.04■□□□□ 0.64
LMO4-202ENST00000370544 ANO7Q6IWH7 933 aa19.04■□□□□ 0.64
LMO4-202ENST00000370544 LINGO2Q7L985 606 aa19.04■□□□□ 0.64
LMO4-202ENST00000370544 NKD1Q969G9 470 aa19.04■□□□□ 0.64
LMO4-202ENST00000370544 LRIG1Q96JA1 1093 aa19.04■□□□□ 0.64
LMO4-202ENST00000370544 SAMD11Q96NU1 681 aa19.04■□□□□ 0.64
LMO4-202ENST00000370544 SGIP1Q9BQI5 828 aa19.04■□□□□ 0.64
LMO4-202ENST00000370544 SLC16A5O15375 505 aa19.03■□□□□ 0.64
LMO4-202ENST00000370544 ALDOAP04075 364 aaKnown RBP19.03■□□□□ 0.64
LMO4-202ENST00000370544 CASRP41180 1078 aa19.03■□□□□ 0.64
LMO4-202ENST00000370544 PITPNAQ00169 270 aa19.03■□□□□ 0.64
LMO4-202ENST00000370544 MAPK14Q16539 360 aa19.03■□□□□ 0.64
LMO4-202ENST00000370544 DECR1Q16698 335 aa19.03■□□□□ 0.64
LMO4-202ENST00000370544 DEFB119Q8N690 84 aa19.03■□□□□ 0.64
LMO4-202ENST00000370544 CNDP2Q96KP4 475 aaKnown RBP19.03■□□□□ 0.64
LMO4-202ENST00000370544 EPYCQ99645 322 aa19.03■□□□□ 0.64
LMO4-202ENST00000370544 PAK6Q9NQU5 681 aaPredicted RBP19.03■□□□□ 0.64
LMO4-202ENST00000370544 LYARQ9NX58 379 aaKnown RBP19.03■□□□□ 0.64
LMO4-202ENST00000370544 ZNF726A6NNF4 738 aa19.03■□□□□ 0.64
LMO4-202ENST00000370544 CAPN14A8MX76 684 aa19.03■□□□□ 0.64
LMO4-202ENST00000370544 KLF8O95600 359 aaPredicted RBP19.03■□□□□ 0.64
LMO4-202ENST00000370544 MPC1LP0DKB6 136 aa19.03■□□□□ 0.64
LMO4-202ENST00000370544 PIM1P11309 404 aaPredicted RBP19.03■□□□□ 0.64
LMO4-202ENST00000370544 PROZP22891 400 aa19.03■□□□□ 0.64
LMO4-202ENST00000370544 PPP1R3AQ16821 1122 aa19.03■□□□□ 0.64
LMO4-202ENST00000370544 LIPJQ5W064 366 aa19.03■□□□□ 0.64
LMO4-202ENST00000370544 GLYATL1Q969I3 302 aa19.03■□□□□ 0.64
LMO4-202ENST00000370544 MALT1Q9UDY8 824 aa19.03■□□□□ 0.64
LMO4-202ENST00000370544 SLC22A1O15245 554 aa19.03■□□□□ 0.64
LMO4-202ENST00000370544 CYB5AP00167 134 aa19.03■□□□□ 0.64
LMO4-202ENST00000370544 ARRB1P49407 418 aaPredicted RBP19.03■□□□□ 0.64
LMO4-202ENST00000370544 CNPY1Q3B7I2 92 aa19.03■□□□□ 0.64
LMO4-202ENST00000370544 OR10Q1Q8NGQ4 319 aa19.03■□□□□ 0.64
LMO4-202ENST00000370544 TNFAIP8L1Q8WVP5 186 aa19.03■□□□□ 0.64
LMO4-202ENST00000370544 HIST1H2AAQ96QV6 131 aa19.03■□□□□ 0.64
LMO4-202ENST00000370544 TNFRSF10DQ9UBN6 386 aa19.03■□□□□ 0.64
LMO4-202ENST00000370544 ZNF879B4DU55 563 aa19.03■□□□□ 0.64
LMO4-202ENST00000370544 DBIP07108 87 aaKnown RBP19.03■□□□□ 0.64
LMO4-202ENST00000370544 SHMT2P34897 504 aa19.03■□□□□ 0.64
LMO4-202ENST00000370544 RTP2Q5QGT7 225 aa19.03■□□□□ 0.64
LMO4-202ENST00000370544 ZNF648Q5T619 568 aaPredicted RBP19.03■□□□□ 0.64
LMO4-202ENST00000370544 TMCO2Q7Z6W1 182 aaPredicted RBP19.03■□□□□ 0.64
LMO4-202ENST00000370544 NCSTNQ92542 709 aa19.03■□□□□ 0.64
LMO4-202ENST00000370544 RAB7BQ96AH8 199 aa19.03■□□□□ 0.64
LMO4-202ENST00000370544 C8BP07358 591 aa19.03■□□□□ 0.64
LMO4-202ENST00000370544 OC90Q02509 493 aaPredicted RBP19.03■□□□□ 0.64
LMO4-202ENST00000370544 CARTPTQ16568 116 aa19.03■□□□□ 0.64
LMO4-202ENST00000370544 LDLRAD1Q5T700 205 aa19.03■□□□□ 0.64
LMO4-202ENST00000370544 COQ8BQ96D53 544 aa19.03■□□□□ 0.64
LMO4-202ENST00000370544 C17orf62Q9BQA9 187 aa19.03■□□□□ 0.64
LMO4-202ENST00000370544 SP140LQ9H930 580 aa19.03■□□□□ 0.64
LMO4-202ENST00000370544 CAPN5O15484 640 aaPredicted RBP19.02■□□□□ 0.64
LMO4-202ENST00000370544 DIRAS1O95057 198 aa19.02■□□□□ 0.64
LMO4-202ENST00000370544 NOVP48745 357 aa19.02■□□□□ 0.64
LMO4-202ENST00000370544 RASGEF1BQ0VAM2 473 aa19.02■□□□□ 0.64
LMO4-202ENST00000370544 TMEM164Q5U3C3 297 aa19.02■□□□□ 0.64
LMO4-202ENST00000370544 RHEBL1Q8TAI7 183 aa19.02■□□□□ 0.64
LMO4-202ENST00000370544 ALPK1Q96QP1 1244 aa19.02■□□□□ 0.64
LMO4-202ENST00000370544 TRIB3Q96RU7 358 aa19.02■□□□□ 0.64
LMO4-202ENST00000370544 FAM83CQ9BQN1 747 aa19.02■□□□□ 0.64
LMO4-202ENST00000370544 GTPBP2Q9BX10 602 aaKnown RBP19.02■□□□□ 0.64
LMO4-202ENST00000370544 REEP4Q9H6H4 257 aa19.02■□□□□ 0.64
LMO4-202ENST00000370544 UPB1Q9UBR1 384 aa19.02■□□□□ 0.64
LMO4-202ENST00000370544 BACE2Q9Y5Z0 518 aa19.02■□□□□ 0.64
LMO4-202ENST00000370544 S1PR4O95977 384 aa19.02■□□□□ 0.64
LMO4-202ENST00000370544 RPS21P63220 83 aaKnown RBP19.02■□□□□ 0.64
LMO4-202ENST00000370544 ARF5P84085 180 aa19.02■□□□□ 0.64
LMO4-202ENST00000370544 CYBRD1Q53TN4 286 aa19.02■□□□□ 0.64
LMO4-202ENST00000370544 ZNF676Q8N7Q3 588 aa19.02■□□□□ 0.64
LMO4-202ENST00000370544 KLHDC7BQ96G42 594 aa19.02■□□□□ 0.64
LMO4-202ENST00000370544 SFXN1Q9H9B4 322 aa19.02■□□□□ 0.64
LMO4-202ENST00000370544 TYRP1P17643 537 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms