RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 COG4Q9H9E3 785 aa14.38□□□□□ -0.11
LMO4-201ENST00000370542 ARNT2Q9HBZ2 717 aa14.38□□□□□ -0.11
LMO4-201ENST00000370542 MRM3Q9HC36 420 aaKnown RBP14.38□□□□□ -0.11
LMO4-201ENST00000370542 NSMCE4AQ9NXX6 385 aa14.38□□□□□ -0.11
LMO4-201ENST00000370542 TMED5Q9Y3A6 229 aa14.38□□□□□ -0.11
LMO4-201ENST00000370542 PCDHGA6Q9Y5G7 932 aa14.38□□□□□ -0.11
LMO4-201ENST00000370542 NBASA2RRP1 2371 aa14.37□□□□□ -0.11
LMO4-201ENST00000370542 HMX2A2RU54 273 aa14.37□□□□□ -0.11
LMO4-201ENST00000370542 HDAC3O15379 428 aa14.37□□□□□ -0.11
LMO4-201ENST00000370542 TRIM13O60858 407 aa14.37□□□□□ -0.11
LMO4-201ENST00000370542 E2F6O75461 281 aa14.37□□□□□ -0.11
LMO4-201ENST00000370542 ANXA9O76027 345 aa14.37□□□□□ -0.11
LMO4-201ENST00000370542 POU3F2P20265 443 aaPredicted RBP14.37□□□□□ -0.11
LMO4-201ENST00000370542 LPOP22079 712 aaPredicted RBP14.37□□□□□ -0.11
LMO4-201ENST00000370542 SERPINB5P36952 375 aa14.37□□□□□ -0.11
LMO4-201ENST00000370542 HALP42357 657 aa14.37□□□□□ -0.11
LMO4-201ENST00000370542 SEPHS1P49903 392 aa14.37□□□□□ -0.11
LMO4-201ENST00000370542 NUDT2P50583 147 aa14.37□□□□□ -0.11
LMO4-201ENST00000370542 PRKAA1Q13131 559 aa14.37□□□□□ -0.11
LMO4-201ENST00000370542 NFE2L1Q14494 772 aa14.37□□□□□ -0.11
LMO4-201ENST00000370542 TAF1AQ15573 450 aaPredicted RBP14.37□□□□□ -0.11
LMO4-201ENST00000370542 ZNF829Q3KNS6 432 aaPredicted RBP14.37□□□□□ -0.11
LMO4-201ENST00000370542 BCL7AQ4VC05 210 aa14.37□□□□□ -0.11
LMO4-201ENST00000370542 CACHD1Q5VU97 1274 aa14.37□□□□□ -0.11
LMO4-201ENST00000370542 C6orf15Q6UXA7 325 aaPredicted RBP14.37□□□□□ -0.11
LMO4-201ENST00000370542 ZCCHC23Q6ZST2 131 aa14.37□□□□□ -0.11
LMO4-201ENST00000370542 MAVSQ7Z434 540 aa14.37□□□□□ -0.11
LMO4-201ENST00000370542 BPHLQ86WA6 291 aaPredicted RBP14.37□□□□□ -0.11
LMO4-201ENST00000370542 CARM1Q86X55 608 aa14.37□□□□□ -0.11
LMO4-201ENST00000370542 KMT5CQ86Y97 462 aa14.37□□□□□ -0.11
LMO4-201ENST00000370542 TMEM102Q8N9M5 508 aaPredicted RBP14.37□□□□□ -0.11
LMO4-201ENST00000370542 PDPRQ8NCN5 879 aa14.37□□□□□ -0.11
LMO4-201ENST00000370542 HIPK4Q8NE63 616 aa14.37□□□□□ -0.11
LMO4-201ENST00000370542 OR2L2Q8NH16 312 aa14.37□□□□□ -0.11
LMO4-201ENST00000370542 STARD8Q92502 1023 aa14.37□□□□□ -0.11
LMO4-201ENST00000370542 DNAJC1Q96KC8 554 aaKnown RBP14.37□□□□□ -0.11
LMO4-201ENST00000370542 TSNARE1Q96NA8 513 aa14.37□□□□□ -0.11
LMO4-201ENST00000370542 OR6C1Q96RD1 312 aa14.37□□□□□ -0.11
LMO4-201ENST00000370542 ULBP3Q9BZM4 244 aa14.37□□□□□ -0.11
LMO4-201ENST00000370542 PNPOQ9NVS9 261 aa14.37□□□□□ -0.11
LMO4-201ENST00000370542 ACSL5Q9ULC5 683 aa14.37□□□□□ -0.11
LMO4-201ENST00000370542 B3GNT3Q9Y2A9 372 aa14.37□□□□□ -0.11
LMO4-201ENST00000370542 AAR2Q9Y312 384 aaKnown RBP14.37□□□□□ -0.11
LMO4-201ENST00000370542 ARL5AQ9Y689 179 aa14.37□□□□□ -0.11
LMO4-201ENST00000370542 IGHV5-51A0A0C4DH38 117 aa14.36□□□□□ -0.11
LMO4-201ENST00000370542 MGAT4DA6NG13 374 aa14.36□□□□□ -0.11
LMO4-201ENST00000370542 H3BSA7 217 aa14.36□□□□□ -0.11
LMO4-201ENST00000370542 AP3B1O00203 1094 aa14.36□□□□□ -0.11
LMO4-201ENST00000370542 STX7O15400 261 aaKnown RBP14.36□□□□□ -0.11
LMO4-201ENST00000370542 LYPLA1O75608 230 aaPredicted RBP14.36□□□□□ -0.11
LMO4-201ENST00000370542 TYK2P29597 1187 aa14.36□□□□□ -0.11
LMO4-201ENST00000370542 CD151P48509 253 aa14.36□□□□□ -0.11
LMO4-201ENST00000370542 FOXM1Q08050 763 aa14.36□□□□□ -0.11
LMO4-201ENST00000370542 STX5Q13190 355 aa14.36□□□□□ -0.11
LMO4-201ENST00000370542 PTPRCAPQ14761 206 aa14.36□□□□□ -0.11
LMO4-201ENST00000370542 SPATS1Q496A3 300 aa14.36□□□□□ -0.11
LMO4-201ENST00000370542 ITPRIPL1Q6GPH6 555 aa14.36□□□□□ -0.11
LMO4-201ENST00000370542 DENND5AQ6IQ26 1287 aa14.36□□□□□ -0.11
LMO4-201ENST00000370542 C10orf107Q8IVU9 208 aa14.36□□□□□ -0.11
LMO4-201ENST00000370542 CARFQ8N187 725 aa14.36□□□□□ -0.11
LMO4-201ENST00000370542 AFAP1L2Q8N4X5 818 aa14.36□□□□□ -0.11
LMO4-201ENST00000370542 BEND7Q8N7W2 519 aaPredicted RBP14.36□□□□□ -0.11
LMO4-201ENST00000370542 APOBEC4Q8WW27 367 aaKnown RBP14.36□□□□□ -0.11
LMO4-201ENST00000370542 EME1Q96AY2 570 aa14.36□□□□□ -0.11
LMO4-201ENST00000370542 ASB9Q96DX5 294 aa14.36□□□□□ -0.11
LMO4-201ENST00000370542 FAR2Q96K12 515 aa14.36□□□□□ -0.11
LMO4-201ENST00000370542 CDRT15Q96T59 188 aa14.36□□□□□ -0.11
LMO4-201ENST00000370542 INSM2Q96T92 566 aaPredicted RBP14.36□□□□□ -0.11
LMO4-201ENST00000370542 CD180Q99467 661 aa14.36□□□□□ -0.11
LMO4-201ENST00000370542 FSD1LQ9BXM9 530 aa14.36□□□□□ -0.11
LMO4-201ENST00000370542 ANKRD60Q9BZ19 345 aa14.36□□□□□ -0.11
LMO4-201ENST00000370542 IL22Q9GZX6 179 aa14.36□□□□□ -0.11
LMO4-201ENST00000370542 C10orf88Q9H8K7 445 aa14.36□□□□□ -0.11
LMO4-201ENST00000370542 ZNF395Q9H8N7 513 aaPredicted RBP14.36□□□□□ -0.11
LMO4-201ENST00000370542 GNPTGQ9UJJ9 305 aa14.36□□□□□ -0.11
LMO4-201ENST00000370542 C2CD3Q4AC94 2353 aa14.36□□□□□ -0.11
LMO4-201ENST00000370542 LOC100653049A0A140TA62 436 aa14.35□□□□□ -0.11
LMO4-201ENST00000370542 OR5K3A6NET4 321 aa14.35□□□□□ -0.11
LMO4-201ENST00000370542 OR2AG2A6NM03 316 aa14.35□□□□□ -0.11
LMO4-201ENST00000370542 TRPC5OSA6NMA1 111 aa14.35□□□□□ -0.11
LMO4-201ENST00000370542 C2orf81A6NN90 581 aa14.35□□□□□ -0.11
LMO4-201ENST00000370542 NOL3O60936 208 aaKnown RBP14.35□□□□□ -0.11
LMO4-201ENST00000370542 PIAS1O75925 651 aa14.35□□□□□ -0.11
LMO4-201ENST00000370542 KRT34O76011 436 aa14.35□□□□□ -0.11
LMO4-201ENST00000370542 SRP72O76094 671 aaKnown RBP14.35□□□□□ -0.11
LMO4-201ENST00000370542 PRAMEF1O95521 474 aa14.35□□□□□ -0.11
LMO4-201ENST00000370542 MTHFD1P11586 935 aaKnown RBP14.35□□□□□ -0.11
LMO4-201ENST00000370542 TCN2P20062 427 aa14.35□□□□□ -0.11
LMO4-201ENST00000370542 SLC7A1P30825 629 aa14.35□□□□□ -0.11
LMO4-201ENST00000370542 CSE1LP55060 971 aaKnown RBP14.35□□□□□ -0.11
LMO4-201ENST00000370542 PPP1CAP62136 330 aa14.35□□□□□ -0.11
LMO4-201ENST00000370542 MRPS22P82650 360 aaKnown RBP14.35□□□□□ -0.11
LMO4-201ENST00000370542 ZNF658BQ4V348 819 aaPredicted RBP14.35□□□□□ -0.11
LMO4-201ENST00000370542 FAM92BQ6ZTR7 304 aa14.35□□□□□ -0.11
LMO4-201ENST00000370542 NCCRP1Q6ZVX7 275 aaPredicted RBP14.35□□□□□ -0.11
LMO4-201ENST00000370542 SNX32Q86XE0 403 aa14.35□□□□□ -0.11
LMO4-201ENST00000370542 PPP1R3BQ86XI6 285 aa14.35□□□□□ -0.11
LMO4-201ENST00000370542 D2HGDHQ8N465 521 aa14.35□□□□□ -0.11
LMO4-201ENST00000370542 GALNT6Q8NCL4 622 aa14.35□□□□□ -0.11
LMO4-201ENST00000370542 BHLHE22Q8NFJ8 381 aaPredicted RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms