RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 SLIRPQ9GZT3 109 aaKnown RBP6.64□□□□□ -1.35
CSDE1-204ENST00000369530 ADNPQ9H2P0 1102 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 LRRC40Q9H9A6 602 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 SP110Q9HB58 689 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 ADPRHL2Q9NX46 363 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 OSGIN1Q9UJX0 560 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 FNDC3AQ9Y2H6 1198 aaKnown RBP6.64□□□□□ -1.35
CSDE1-204ENST00000369530 KCNE2Q9Y6J6 123 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 CUBNO60494 3623 aa6.64□□□□□ -1.35
CSDE1-204ENST00000369530 C17orf113A0A1B0GUU1 675 aa6.63□□□□□ -1.35
CSDE1-204ENST00000369530 MID1O15344 667 aa6.63□□□□□ -1.35
CSDE1-204ENST00000369530 KCNK5O95279 499 aa6.63□□□□□ -1.35
CSDE1-204ENST00000369530 RASAL1O95294 804 aa6.63□□□□□ -1.35
CSDE1-204ENST00000369530 ONECUT2O95948 504 aa6.63□□□□□ -1.35
CSDE1-204ENST00000369530 CSF2P04141 144 aa6.63□□□□□ -1.35
CSDE1-204ENST00000369530 ADRB3P13945 408 aa6.63□□□□□ -1.35
CSDE1-204ENST00000369530 SPNP16150 400 aa6.63□□□□□ -1.35
CSDE1-204ENST00000369530 CRHR1P34998 444 aa6.63□□□□□ -1.35
CSDE1-204ENST00000369530 PLA2G16P53816 162 aa6.63□□□□□ -1.35
CSDE1-204ENST00000369530 TEKQ02763 1124 aa6.63□□□□□ -1.35
CSDE1-204ENST00000369530 PRKCDQ05655 676 aa6.63□□□□□ -1.35
CSDE1-204ENST00000369530 KLF10Q13118 480 aa6.63□□□□□ -1.35
CSDE1-204ENST00000369530 NOMO1Q15155 1222 aa6.63□□□□□ -1.35
CSDE1-204ENST00000369530 CACHD1Q5VU97 1274 aa6.63□□□□□ -1.35
CSDE1-204ENST00000369530 CHSY3Q70JA7 882 aa6.63□□□□□ -1.35
CSDE1-204ENST00000369530 ZCCHC7Q8N3Z6 543 aaKnown RBP6.63□□□□□ -1.35
CSDE1-204ENST00000369530 GPBAR1Q8TDU6 330 aa6.63□□□□□ -1.35
CSDE1-204ENST00000369530 PPA2Q9H2U2 334 aa6.63□□□□□ -1.35
CSDE1-204ENST00000369530 FANCFQ9NPI8 374 aa6.63□□□□□ -1.35
CSDE1-204ENST00000369530 EMC3Q9P0I2 261 aa6.63□□□□□ -1.35
CSDE1-204ENST00000369530 TINAGQ9UJW2 476 aa6.63□□□□□ -1.35
CSDE1-204ENST00000369530 TRAPPC4Q9Y296 219 aa6.63□□□□□ -1.35
CSDE1-204ENST00000369530 PRELID3BQ9Y3B1 194 aa6.63□□□□□ -1.35
CSDE1-204ENST00000369530 TDRD6O60522 2096 aaKnown RBP6.63□□□□□ -1.35
CSDE1-204ENST00000369530 PIEZO1Q92508 2521 aa6.63□□□□□ -1.35
CSDE1-204ENST00000369530 ANK3Q12955 4377 aaKnown RBP6.63□□□□□ -1.35
CSDE1-204ENST00000369530 SPTY2D1-AS1A0A0U1RR47 76 aa6.63□□□□□ -1.35
CSDE1-204ENST00000369530 CLEC18AA5D8T8 446 aa6.63□□□□□ -1.35
CSDE1-204ENST00000369530 TRIM38O00635 465 aa6.63□□□□□ -1.35
CSDE1-204ENST00000369530 MATN3O15232 486 aa6.63□□□□□ -1.35
CSDE1-204ENST00000369530 PPM1BO75688 479 aa6.63□□□□□ -1.35
CSDE1-204ENST00000369530 DBTP11182 482 aaKnown RBP6.63□□□□□ -1.35
CSDE1-204ENST00000369530 HLA-EP13747 358 aa6.63□□□□□ -1.35
CSDE1-204ENST00000369530 ERP29P30040 261 aaKnown RBP6.63□□□□□ -1.35
CSDE1-204ENST00000369530 ABCG1P45844 678 aa6.63□□□□□ -1.35
CSDE1-204ENST00000369530 SERPINB10P48595 397 aa6.63□□□□□ -1.35
CSDE1-204ENST00000369530 ZFP36L1Q07352 338 aaKnown RBP6.63□□□□□ -1.35
CSDE1-204ENST00000369530 DUOXA1Q1HG43 343 aa6.63□□□□□ -1.35
CSDE1-204ENST00000369530 Q3ZCU0 254 aa6.63□□□□□ -1.35
CSDE1-204ENST00000369530 ZNF805Q5CZA5 627 aa6.63□□□□□ -1.35
CSDE1-204ENST00000369530 CARD16Q5EG05 197 aa6.63□□□□□ -1.35
CSDE1-204ENST00000369530 FNBP1LQ5T0N5 605 aa6.63□□□□□ -1.35
CSDE1-204ENST00000369530 DESI1Q6ICB0 168 aa6.63□□□□□ -1.35
CSDE1-204ENST00000369530 TCEAL6Q6IPX3 200 aa6.63□□□□□ -1.35
CSDE1-204ENST00000369530 CLEC18BQ6UXF7 455 aa6.63□□□□□ -1.35
CSDE1-204ENST00000369530 ADAMTSL4Q6UY14 1074 aa6.63□□□□□ -1.35
CSDE1-204ENST00000369530 ZNF517Q6ZMY9 492 aaPredicted RBP6.63□□□□□ -1.35
CSDE1-204ENST00000369530 TPGS1Q6ZTW0 290 aa6.63□□□□□ -1.35
CSDE1-204ENST00000369530 OXR1Q8N573 874 aa6.63□□□□□ -1.35
CSDE1-204ENST00000369530 CCNYL1Q8N7R7 359 aa6.63□□□□□ -1.35
CSDE1-204ENST00000369530 CLEC18CQ8NCF0 446 aa6.63□□□□□ -1.35
CSDE1-204ENST00000369530 BHLHE22Q8NFJ8 381 aaPredicted RBP6.63□□□□□ -1.35
CSDE1-204ENST00000369530 GPR156Q8NFN8 814 aa6.63□□□□□ -1.35
CSDE1-204ENST00000369530 LRRC20Q8TCA0 184 aa6.63□□□□□ -1.35
CSDE1-204ENST00000369530 RPL3LQ92901 407 aaKnown RBP6.63□□□□□ -1.35
CSDE1-204ENST00000369530 TCEAL3Q969E4 200 aa6.63□□□□□ -1.35
CSDE1-204ENST00000369530 RAB7BQ96AH8 199 aa6.63□□□□□ -1.35
CSDE1-204ENST00000369530 FAM111AQ96PZ2 611 aa6.63□□□□□ -1.35
CSDE1-204ENST00000369530 ZSCAN5AQ9BUG6 496 aa6.63□□□□□ -1.35
CSDE1-204ENST00000369530 MLPHQ9BV36 600 aaPredicted RBP6.63□□□□□ -1.35
CSDE1-204ENST00000369530 LHPPQ9H008 270 aa6.63□□□□□ -1.35
CSDE1-204ENST00000369530 SDHAF3Q9NRP4 125 aa6.63□□□□□ -1.35
CSDE1-204ENST00000369530 NDRG2Q9UN36 371 aaKnown RBP6.63□□□□□ -1.35
CSDE1-204ENST00000369530 GMPPBQ9Y5P6 360 aa6.63□□□□□ -1.35
CSDE1-204ENST00000369530 EFCAB10A6NFE3 127 aa6.63□□□□□ -1.35
CSDE1-204ENST00000369530 PRSS44E7EML9 344 aa6.63□□□□□ -1.35
CSDE1-204ENST00000369530 KPNA5O15131 536 aa6.63□□□□□ -1.35
CSDE1-204ENST00000369530 NOS1APO75052 506 aaPredicted RBP6.63□□□□□ -1.35
CSDE1-204ENST00000369530 TMEM63AO94886 807 aa6.63□□□□□ -1.35
CSDE1-204ENST00000369530 NME1P15531 152 aaKnown RBP6.63□□□□□ -1.35
CSDE1-204ENST00000369530 ERCC2P18074 760 aa6.63□□□□□ -1.35
CSDE1-204ENST00000369530 PCMT1P22061 227 aa6.63□□□□□ -1.35
CSDE1-204ENST00000369530 CHMP24386 653 aa6.63□□□□□ -1.35
CSDE1-204ENST00000369530 SERPINB5P36952 375 aa6.63□□□□□ -1.35
CSDE1-204ENST00000369530 GMPRP36959 345 aa6.63□□□□□ -1.35
CSDE1-204ENST00000369530 B4GALNT1Q00973 533 aa6.63□□□□□ -1.35
CSDE1-204ENST00000369530 BROXQ5VW32 411 aa6.63□□□□□ -1.35
CSDE1-204ENST00000369530 PDPK2PQ6A1A2 396 aa6.63□□□□□ -1.35
CSDE1-204ENST00000369530 KIAA1161Q6NSJ0 714 aa6.63□□□□□ -1.35
CSDE1-204ENST00000369530 EPGNQ6UW88 154 aa6.63□□□□□ -1.35
CSDE1-204ENST00000369530 TFAP2EQ6VUC0 442 aa6.63□□□□□ -1.35
CSDE1-204ENST00000369530 ZNF782Q6ZMW2 699 aaPredicted RBP6.63□□□□□ -1.35
CSDE1-204ENST00000369530 TMPRSS9Q7Z410 1059 aa6.63□□□□□ -1.35
CSDE1-204ENST00000369530 LIX1Q8N485 282 aa6.63□□□□□ -1.35
CSDE1-204ENST00000369530 BMPERQ8N8U9 685 aa6.63□□□□□ -1.35
CSDE1-204ENST00000369530 KYQ8NBH2 561 aa6.63□□□□□ -1.35
CSDE1-204ENST00000369530 NTNG2Q96CW9 530 aa6.63□□□□□ -1.35
CSDE1-204ENST00000369530 OMA1Q96E52 524 aa6.63□□□□□ -1.35
CSDE1-204ENST00000369530 RPRD1BQ9NQG5 326 aaKnown RBP6.63□□□□□ -1.35
CSDE1-204ENST00000369530 ACTR3BQ9P1U1 418 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms