RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 C1QTNF7Q9BXJ2 289 aa8.48□□□□□ -1.05
TPM3-213ENST00000368545 TRIM54Q9BYV2 358 aa8.48□□□□□ -1.05
TPM3-213ENST00000368545 NMUR2Q9GZQ4 415 aa8.48□□□□□ -1.05
TPM3-213ENST00000368545 TCF7L2Q9NQB0 619 aa8.48□□□□□ -1.05
TPM3-213ENST00000368545 PDP2Q9P2J9 529 aa8.48□□□□□ -1.05
TPM3-213ENST00000368545 FZD4Q9ULV1 537 aa8.48□□□□□ -1.05
TPM3-213ENST00000368545 CDYLQ9Y232 598 aa8.48□□□□□ -1.05
TPM3-213ENST00000368545 ASB1Q9Y576 335 aa8.48□□□□□ -1.05
TPM3-213ENST00000368545 OR2AG2A6NM03 316 aa8.47□□□□□ -1.05
TPM3-213ENST00000368545 FCHO1O14526 889 aa8.47□□□□□ -1.05
TPM3-213ENST00000368545 INPP4BO15327 924 aa8.47□□□□□ -1.05
TPM3-213ENST00000368545 CDK14O94921 469 aa8.47□□□□□ -1.05
TPM3-213ENST00000368545 SIX3O95343 332 aaPredicted RBP8.47□□□□□ -1.05
TPM3-213ENST00000368545 RASSF2P50749 326 aa8.47□□□□□ -1.05
TPM3-213ENST00000368545 HK3P52790 923 aa8.47□□□□□ -1.05
TPM3-213ENST00000368545 RPS21P63220 83 aaKnown RBP8.47□□□□□ -1.05
TPM3-213ENST00000368545 PLOD1Q02809 727 aaPredicted RBP8.47□□□□□ -1.05
TPM3-213ENST00000368545 HSPA14Q0VDF9 509 aa8.47□□□□□ -1.05
TPM3-213ENST00000368545 SRSF5Q13243 272 aaKnown RBP8.47□□□□□ -1.05
TPM3-213ENST00000368545 TUBB3Q13509 450 aa8.47□□□□□ -1.05
TPM3-213ENST00000368545 SYTL3Q4VX76 610 aa8.47□□□□□ -1.05
TPM3-213ENST00000368545 KHDC1Q4VXA5 237 aaKnown RBP8.47□□□□□ -1.05
TPM3-213ENST00000368545 SULT1C3Q6IMI6 304 aa8.47□□□□□ -1.05
TPM3-213ENST00000368545 TTC23LQ6PF05 361 aa8.47□□□□□ -1.05
TPM3-213ENST00000368545 CYHR1Q6ZMK1 362 aa8.47□□□□□ -1.05
TPM3-213ENST00000368545 USP30Q70CQ3 517 aa8.47□□□□□ -1.05
TPM3-213ENST00000368545 TMPRSS6Q8IU80 811 aa8.47□□□□□ -1.05
TPM3-213ENST00000368545 TCAIMQ8N3R3 496 aa8.47□□□□□ -1.05
TPM3-213ENST00000368545 RASGEF1AQ8N9B8 481 aa8.47□□□□□ -1.05
TPM3-213ENST00000368545 OR10H5Q8NGA6 315 aa8.47□□□□□ -1.05
TPM3-213ENST00000368545 OR56A4Q8NGH8 313 aa8.47□□□□□ -1.05
TPM3-213ENST00000368545 ZNF483Q8TF39 744 aaPredicted RBP8.47□□□□□ -1.05
TPM3-213ENST00000368545 UBTD2Q8WUN7 234 aa8.47□□□□□ -1.05
TPM3-213ENST00000368545 NAT14Q8WUY8 206 aa8.47□□□□□ -1.05
TPM3-213ENST00000368545 TMEM159Q96B96 161 aa8.47□□□□□ -1.05
TPM3-213ENST00000368545 MOCOSQ96EN8 888 aa8.47□□□□□ -1.05
TPM3-213ENST00000368545 HIC2Q96JB3 615 aa8.47□□□□□ -1.05
TPM3-213ENST00000368545 G6PC3Q9BUM1 346 aa8.47□□□□□ -1.05
TPM3-213ENST00000368545 CCDC28BQ9BUN5 200 aa8.47□□□□□ -1.05
TPM3-213ENST00000368545 PREBQ9HCU5 417 aa8.47□□□□□ -1.05
TPM3-213ENST00000368545 FBXL12Q9NXK8 326 aa8.47□□□□□ -1.05
TPM3-213ENST00000368545 TNFRSF10DQ9UBN6 386 aa8.47□□□□□ -1.05
TPM3-213ENST00000368545 PCTPQ9UKL6 214 aa8.47□□□□□ -1.05
TPM3-213ENST00000368545 MKL2Q9ULH7 1088 aa8.47□□□□□ -1.05
TPM3-213ENST00000368545 CNOT6Q9ULM6 557 aaKnown RBP8.47□□□□□ -1.05
TPM3-213ENST00000368545 GPR34Q9UPC5 381 aa8.47□□□□□ -1.05
TPM3-213ENST00000368545 CFAP20Q9Y6A4 193 aaKnown RBP8.47□□□□□ -1.05
TPM3-213ENST00000368545 F5P12259 2224 aa8.47□□□□□ -1.05
TPM3-213ENST00000368545 A0A1W2PQF6 199 aa8.47□□□□□ -1.05
TPM3-213ENST00000368545 GPR89AB7ZAQ6 455 aa8.47□□□□□ -1.05
TPM3-213ENST00000368545 E2F3O00716 465 aa8.47□□□□□ -1.05
TPM3-213ENST00000368545 GRID2O43424 1007 aa8.47□□□□□ -1.05
TPM3-213ENST00000368545 GPC4O75487 556 aa8.47□□□□□ -1.05
TPM3-213ENST00000368545 SLCO2B1O94956 709 aa8.47□□□□□ -1.05
TPM3-213ENST00000368545 FSBPO95073 299 aa8.47□□□□□ -1.05
TPM3-213ENST00000368545 FGF4P08620 206 aa8.47□□□□□ -1.05
TPM3-213ENST00000368545 ANXA5P08758 320 aa8.47□□□□□ -1.05
TPM3-213ENST00000368545 GPR89BP0CG08 455 aa8.47□□□□□ -1.05
TPM3-213ENST00000368545 ZNF883P0CG24 379 aa8.47□□□□□ -1.05
TPM3-213ENST00000368545 ACADMP11310 421 aa8.47□□□□□ -1.05
TPM3-213ENST00000368545 CYP2A7P20853 494 aa8.47□□□□□ -1.05
TPM3-213ENST00000368545 HSPA7P48741 367 aa8.47□□□□□ -1.05
TPM3-213ENST00000368545 INHBCP55103 352 aa8.47□□□□□ -1.05
TPM3-213ENST00000368545 AP1S2P56377 157 aa8.47□□□□□ -1.05
TPM3-213ENST00000368545 ACTN3Q08043 901 aaPredicted RBP8.47□□□□□ -1.05
TPM3-213ENST00000368545 CDC16Q13042 620 aa8.47□□□□□ -1.05
TPM3-213ENST00000368545 TOMM20Q15388 145 aa8.47□□□□□ -1.05
TPM3-213ENST00000368545 PNCKQ6P2M8 343 aa8.47□□□□□ -1.05
TPM3-213ENST00000368545 NEK5Q6P3R8 708 aa8.47□□□□□ -1.05
TPM3-213ENST00000368545 TMEM220Q6QAJ8 160 aa8.47□□□□□ -1.05
TPM3-213ENST00000368545 C1orf122Q6ZSJ8 110 aa8.47□□□□□ -1.05
TPM3-213ENST00000368545 USP34Q70CQ2 3546 aa8.47□□□□□ -1.05
TPM3-213ENST00000368545 LPCAT2Q7L5N7 544 aa8.47□□□□□ -1.05
TPM3-213ENST00000368545 EFL1Q7Z2Z2 1120 aaKnown RBP8.47□□□□□ -1.05
TPM3-213ENST00000368545 CACUL1Q86Y37 369 aa8.47□□□□□ -1.05
TPM3-213ENST00000368545 CLYBLQ8N0X4 340 aa8.47□□□□□ -1.05
TPM3-213ENST00000368545 GANCQ8TET4 914 aa8.47□□□□□ -1.05
TPM3-213ENST00000368545 ERLEC1Q96DZ1 483 aa8.47□□□□□ -1.05
TPM3-213ENST00000368545 SIPA1Q96FS4 1042 aa8.47□□□□□ -1.05
TPM3-213ENST00000368545 COX14Q96I36 57 aa8.47□□□□□ -1.05
TPM3-213ENST00000368545 MAP6Q96JE9 813 aa8.47□□□□□ -1.05
TPM3-213ENST00000368545 MAELQ96JY0 434 aaKnown RBP8.47□□□□□ -1.05
TPM3-213ENST00000368545 LINC00615Q96LM1 132 aaPredicted RBP8.47□□□□□ -1.05
TPM3-213ENST00000368545 EGFL8Q99944 293 aa8.47□□□□□ -1.05
TPM3-213ENST00000368545 NUF2Q9BZD4 464 aa8.47□□□□□ -1.05
TPM3-213ENST00000368545 MEAF6Q9HAF1 191 aa8.47□□□□□ -1.05
TPM3-213ENST00000368545 PARVBQ9HBI1 364 aa8.47□□□□□ -1.05
TPM3-213ENST00000368545 CD248Q9HCU0 757 aa8.47□□□□□ -1.05
TPM3-213ENST00000368545 UTP6Q9NYH9 597 aaKnown RBP8.47□□□□□ -1.05
TPM3-213ENST00000368545 SERGEFQ9UGK8 458 aa8.47□□□□□ -1.05
TPM3-213ENST00000368545 PTBP2Q9UKA9 531 aaKnown RBP8.47□□□□□ -1.05
TPM3-213ENST00000368545 NCKAP1Q9Y2A7 1128 aa8.47□□□□□ -1.05
TPM3-213ENST00000368545 ZFC3H1O60293 1989 aaKnown RBP8.46□□□□□ -1.05
TPM3-213ENST00000368545 GOLGA8QA0A0J9YX86 632 aa8.46□□□□□ -1.06
TPM3-213ENST00000368545 C17orf113A0A1B0GUU1 675 aa8.46□□□□□ -1.06
TPM3-213ENST00000368545 GOLGA8OA6NCC3 632 aa8.46□□□□□ -1.06
TPM3-213ENST00000368545 CFAP73A6NFT4 308 aa8.46□□□□□ -1.06
TPM3-213ENST00000368545 IGLON5A6NGN9 336 aa8.46□□□□□ -1.06
TPM3-213ENST00000368545 C9orf172C9J069 976 aa8.46□□□□□ -1.06
TPM3-213ENST00000368545 GOLGA8NF8WBI6 632 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms