RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 C21orf140B9A014 251 aa14.35□□□□□ -0.11
SMPDL3A-201ENST00000368440 K7EPI3 171 aa14.35□□□□□ -0.11
SMPDL3A-201ENST00000368440 NKX2-8O15522 239 aa14.35□□□□□ -0.11
SMPDL3A-201ENST00000368440 AGXTP21549 392 aa14.35□□□□□ -0.11
SMPDL3A-201ENST00000368440 SCTRP47872 440 aa14.35□□□□□ -0.11
SMPDL3A-201ENST00000368440 SLBPQ14493 270 aaKnown RBP eCLIP14.35□□□□□ -0.11
SMPDL3A-201ENST00000368440 FAM214AQ32MH5 1076 aa14.35□□□□□ -0.11
SMPDL3A-201ENST00000368440 NKAIN1Q4KMZ8 207 aa14.35□□□□□ -0.11
SMPDL3A-201ENST00000368440 AGBL2Q5U5Z8 902 aa14.35□□□□□ -0.11
SMPDL3A-201ENST00000368440 ASPGQ86U10 573 aa14.35□□□□□ -0.11
SMPDL3A-201ENST00000368440 KCT2Q8NC54 265 aa14.35□□□□□ -0.11
SMPDL3A-201ENST00000368440 SNRNP27Q8WVK2 155 aaKnown RBP14.35□□□□□ -0.11
SMPDL3A-201ENST00000368440 PHF21BQ96EK2 531 aa14.35□□□□□ -0.11
SMPDL3A-201ENST00000368440 THAP11Q96EK4 314 aa14.35□□□□□ -0.11
SMPDL3A-201ENST00000368440 DPH2Q9BQC3 489 aaPredicted RBP14.35□□□□□ -0.11
SMPDL3A-201ENST00000368440 MRPL57Q9BQC6 102 aaKnown RBP14.35□□□□□ -0.11
SMPDL3A-201ENST00000368440 AIF1LQ9BQI0 150 aa14.35□□□□□ -0.11
SMPDL3A-201ENST00000368440 TMEM109Q9BVC6 243 aa14.35□□□□□ -0.11
SMPDL3A-201ENST00000368440 FARSAQ9Y285 508 aaKnown RBP14.35□□□□□ -0.11
SMPDL3A-201ENST00000368440 PCSK5Q92824 1860 aa14.35□□□□□ -0.11
SMPDL3A-201ENST00000368440 CLGNO14967 610 aa14.35□□□□□ -0.11
SMPDL3A-201ENST00000368440 FURINP09958 794 aa14.35□□□□□ -0.11
SMPDL3A-201ENST00000368440 PRKAR1AP10644 381 aa14.35□□□□□ -0.11
SMPDL3A-201ENST00000368440 DOC2AQ14183 400 aa14.35□□□□□ -0.11
SMPDL3A-201ENST00000368440 NCF4Q15080 339 aa14.35□□□□□ -0.11
SMPDL3A-201ENST00000368440 MUM1Q2TAK8 710 aa14.35□□□□□ -0.11
SMPDL3A-201ENST00000368440 XKR6Q5GH73 641 aa14.35□□□□□ -0.11
SMPDL3A-201ENST00000368440 MLIPQ5VWP3 458 aa14.35□□□□□ -0.11
SMPDL3A-201ENST00000368440 ADNP2Q6IQ32 1131 aa14.35□□□□□ -0.11
SMPDL3A-201ENST00000368440 PRSS41Q7RTY9 318 aa14.35□□□□□ -0.11
SMPDL3A-201ENST00000368440 TEX9Q8N6V9 391 aa14.35□□□□□ -0.11
SMPDL3A-201ENST00000368440 ZCCHC10Q8TBK6 192 aa14.35□□□□□ -0.11
SMPDL3A-201ENST00000368440 SLC13A3Q8WWT9 602 aa14.35□□□□□ -0.11
SMPDL3A-201ENST00000368440 EFHD1Q9BUP0 239 aa14.35□□□□□ -0.11
SMPDL3A-201ENST00000368440 NLNQ9BYT8 704 aa14.35□□□□□ -0.11
SMPDL3A-201ENST00000368440 IFT80Q9P2H3 777 aaPredicted RBP14.35□□□□□ -0.11
SMPDL3A-201ENST00000368440 KCND3Q9UK17 655 aa14.35□□□□□ -0.11
SMPDL3A-201ENST00000368440 EMCNQ9ULC0 261 aa14.35□□□□□ -0.11
SMPDL3A-201ENST00000368440 LHX6Q9UPM6 363 aa14.35□□□□□ -0.11
SMPDL3A-201ENST00000368440 NDUFS4O43181 175 aa14.34□□□□□ -0.11
SMPDL3A-201ENST00000368440 FOXS1O43638 330 aa14.34□□□□□ -0.11
SMPDL3A-201ENST00000368440 SERPIND1P05546 499 aa14.34□□□□□ -0.11
SMPDL3A-201ENST00000368440 RAB40ALP0C0E4 278 aa14.34□□□□□ -0.11
SMPDL3A-201ENST00000368440 NR1D1P20393 614 aa14.34□□□□□ -0.11
SMPDL3A-201ENST00000368440 PTPN4P29074 926 aa14.34□□□□□ -0.11
SMPDL3A-201ENST00000368440 EEF1DP29692 281 aaKnown RBP14.34□□□□□ -0.11
SMPDL3A-201ENST00000368440 EMP3P54852 163 aa14.34□□□□□ -0.11
SMPDL3A-201ENST00000368440 RPS15P62841 145 aaKnown RBP14.34□□□□□ -0.11
SMPDL3A-201ENST00000368440 CHIT1Q13231 466 aa14.34□□□□□ -0.11
SMPDL3A-201ENST00000368440 IL10RAQ13651 578 aa14.34□□□□□ -0.11
SMPDL3A-201ENST00000368440 RBBP5Q15291 538 aaKnown RBP14.34□□□□□ -0.11
SMPDL3A-201ENST00000368440 PCBP2Q15366 365 aaKnown RBP eCLIP14.34□□□□□ -0.11
SMPDL3A-201ENST00000368440 RPS27LQ71UM5 84 aaKnown RBP14.34□□□□□ -0.11
SMPDL3A-201ENST00000368440 CROCCP2Q86T23 111 aa14.34□□□□□ -0.11
SMPDL3A-201ENST00000368440 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.34□□□□□ -0.11
SMPDL3A-201ENST00000368440 SHISA5Q8N114 240 aa14.34□□□□□ -0.11
SMPDL3A-201ENST00000368440 C4orf33Q8N1A6 199 aa14.34□□□□□ -0.11
SMPDL3A-201ENST00000368440 PGM2Q96G03 612 aa14.34□□□□□ -0.11
SMPDL3A-201ENST00000368440 CAPS2Q9BXY5 557 aa14.34□□□□□ -0.11
SMPDL3A-201ENST00000368440 GPR87Q9BY21 358 aa14.34□□□□□ -0.11
SMPDL3A-201ENST00000368440 ZFP69BQ9UJL9 534 aa14.34□□□□□ -0.11
SMPDL3A-201ENST00000368440 SCN3AQ9NY46 2000 aa14.34□□□□□ -0.11
SMPDL3A-201ENST00000368440 A0A0A6YYC8 382 aaPredicted RBP14.33□□□□□ -0.11
SMPDL3A-201ENST00000368440 ZNF891A8MT65 544 aaPredicted RBP14.33□□□□□ -0.11
SMPDL3A-201ENST00000368440 A8MT66 165 aa14.33□□□□□ -0.11
SMPDL3A-201ENST00000368440 C9J4A7 227 aa14.33□□□□□ -0.11
SMPDL3A-201ENST00000368440 I3L1I5 382 aaPredicted RBP14.33□□□□□ -0.11
SMPDL3A-201ENST00000368440 E2F3O00716 465 aa14.33□□□□□ -0.11
SMPDL3A-201ENST00000368440 TXNDC9O14530 226 aa14.33□□□□□ -0.11
SMPDL3A-201ENST00000368440 FFAR3O14843 346 aa14.33□□□□□ -0.11
SMPDL3A-201ENST00000368440 GPR42O15529 346 aa14.33□□□□□ -0.11
SMPDL3A-201ENST00000368440 SMIM24O75264 130 aa14.33□□□□□ -0.11
SMPDL3A-201ENST00000368440 CREG1O75629 220 aa14.33□□□□□ -0.11
SMPDL3A-201ENST00000368440 ERV3-1Q14264 604 aa14.33□□□□□ -0.11
SMPDL3A-201ENST00000368440 TTC19Q6DKK2 380 aaPredicted RBP14.33□□□□□ -0.11
SMPDL3A-201ENST00000368440 TMEM214Q6NUQ4 689 aaKnown RBP14.33□□□□□ -0.11
SMPDL3A-201ENST00000368440 MRPL14Q6P1L8 145 aaKnown RBP14.33□□□□□ -0.11
SMPDL3A-201ENST00000368440 GPR155Q7Z3F1 870 aa14.33□□□□□ -0.11
SMPDL3A-201ENST00000368440 GOLGA7Q7Z5G4 137 aa14.33□□□□□ -0.11
SMPDL3A-201ENST00000368440 ZSCAN1Q8NBB4 408 aa14.33□□□□□ -0.11
SMPDL3A-201ENST00000368440 CAMKVQ8NCB2 501 aa14.33□□□□□ -0.11
SMPDL3A-201ENST00000368440 WDR34Q96EX3 536 aa14.33□□□□□ -0.11
SMPDL3A-201ENST00000368440 AICDAQ9GZX7 198 aa14.33□□□□□ -0.11
SMPDL3A-201ENST00000368440 C12orf65Q9H3J6 166 aaKnown RBP14.33□□□□□ -0.11
SMPDL3A-201ENST00000368440 EHD1Q9H4M9 534 aa14.33□□□□□ -0.11
SMPDL3A-201ENST00000368440 ACSS2Q9NR19 701 aa14.33□□□□□ -0.11
SMPDL3A-201ENST00000368440 CTSFQ9UBX1 484 aa14.33□□□□□ -0.11
SMPDL3A-201ENST00000368440 LGALS13Q9UHV8 139 aa14.33□□□□□ -0.11
SMPDL3A-201ENST00000368440 TCFL5Q9UL49 500 aa14.33□□□□□ -0.11
SMPDL3A-201ENST00000368440 STX16-NPEPL1H3BU86 382 aa14.33□□□□□ -0.12
SMPDL3A-201ENST00000368440 STX16O14662 325 aa14.33□□□□□ -0.12
SMPDL3A-201ENST00000368440 H2AFYO75367 372 aaKnown RBP14.33□□□□□ -0.12
SMPDL3A-201ENST00000368440 KLF7O75840 302 aaPredicted RBP14.33□□□□□ -0.12
SMPDL3A-201ENST00000368440 ONECUT2O95948 504 aa14.33□□□□□ -0.12
SMPDL3A-201ENST00000368440 GSTA1P08263 222 aa14.33□□□□□ -0.12
SMPDL3A-201ENST00000368440 SLC35G6P0C7Q6 338 aa14.33□□□□□ -0.12
SMPDL3A-201ENST00000368440 EPB42P16452 691 aa14.33□□□□□ -0.12
SMPDL3A-201ENST00000368440 IL1RNP18510 177 aa14.33□□□□□ -0.12
SMPDL3A-201ENST00000368440 AHRP35869 848 aa14.33□□□□□ -0.12
SMPDL3A-201ENST00000368440 IRF8Q02556 426 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms