RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 ZXDCQ2QGD7 858 aaPredicted RBP15.11■□□□□ 0.01
CKS1B-202ENST00000368436 BTBD16Q32M84 506 aa15.11■□□□□ 0.01
CKS1B-202ENST00000368436 MFSD4BQ5TF39 518 aa15.11■□□□□ 0.01
CKS1B-202ENST00000368436 PAQR3Q6TCH7 311 aa15.11■□□□□ 0.01
CKS1B-202ENST00000368436 LCTLQ6UWM7 567 aa15.11■□□□□ 0.01
CKS1B-202ENST00000368436 TMEM207Q6UWW9 146 aa15.11■□□□□ 0.01
CKS1B-202ENST00000368436 MBOAT1Q6ZNC8 495 aa15.11■□□□□ 0.01
CKS1B-202ENST00000368436 ASPGQ86U10 573 aa15.11■□□□□ 0.01
CKS1B-202ENST00000368436 SLC26A11Q86WA9 606 aa15.11■□□□□ 0.01
CKS1B-202ENST00000368436 C17orf64Q86WR6 236 aa15.11■□□□□ 0.01
CKS1B-202ENST00000368436 PPIL6Q8IXY8 311 aa15.11■□□□□ 0.01
CKS1B-202ENST00000368436 PLPP5Q8NEB5 264 aa15.11■□□□□ 0.01
CKS1B-202ENST00000368436 ITLN2Q8WWU7 325 aaPredicted RBP15.11■□□□□ 0.01
CKS1B-202ENST00000368436 NDNQ99608 321 aa15.11■□□□□ 0.01
CKS1B-202ENST00000368436 ATG10Q9H0Y0 220 aa15.11■□□□□ 0.01
CKS1B-202ENST00000368436 SLC22A7Q9Y694 548 aa15.11■□□□□ 0.01
CKS1B-202ENST00000368436 ABCA12Q86UK0 2595 aa15.1■□□□□ 0.01
CKS1B-202ENST00000368436 ARHGAP10A1A4S6 786 aa15.1■□□□□ 0.01
CKS1B-202ENST00000368436 PRF1P14222 555 aa15.1■□□□□ 0.01
CKS1B-202ENST00000368436 PGAM1P18669 254 aa15.1■□□□□ 0.01
CKS1B-202ENST00000368436 IL10P22301 178 aa15.1■□□□□ 0.01
CKS1B-202ENST00000368436 CA7P43166 264 aa15.1■□□□□ 0.01
CKS1B-202ENST00000368436 RHAGQ02094 409 aa15.1■□□□□ 0.01
CKS1B-202ENST00000368436 NAE1Q13564 534 aa15.1■□□□□ 0.01
CKS1B-202ENST00000368436 CRYMQ14894 314 aa15.1■□□□□ 0.01
CKS1B-202ENST00000368436 EXT1Q16394 746 aa15.1■□□□□ 0.01
CKS1B-202ENST00000368436 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.1■□□□□ 0.01
CKS1B-202ENST00000368436 ZNF766Q5HY98 468 aa15.1■□□□□ 0.01
CKS1B-202ENST00000368436 ACER2Q5QJU3 275 aa15.1■□□□□ 0.01
CKS1B-202ENST00000368436 RNASEH2BQ5TBB1 312 aaKnown RBP15.1■□□□□ 0.01
CKS1B-202ENST00000368436 CAPN13Q6MZZ7 669 aaPredicted RBP15.1■□□□□ 0.01
CKS1B-202ENST00000368436 PALM2Q8IXS6 379 aa15.1■□□□□ 0.01
CKS1B-202ENST00000368436 BEST3Q8N1M1 668 aa15.1■□□□□ 0.01
CKS1B-202ENST00000368436 AFAP1L2Q8N4X5 818 aa15.1■□□□□ 0.01
CKS1B-202ENST00000368436 MFSD9Q8NBP5 474 aa15.1■□□□□ 0.01
CKS1B-202ENST00000368436 ABHD11Q8NFV4 315 aa15.1■□□□□ 0.01
CKS1B-202ENST00000368436 OR4K1Q8NGD4 311 aa15.1■□□□□ 0.01
CKS1B-202ENST00000368436 M1APQ8TC57 530 aa15.1■□□□□ 0.01
CKS1B-202ENST00000368436 SLC13A3Q8WWT9 602 aa15.1■□□□□ 0.01
CKS1B-202ENST00000368436 NAP1L3Q99457 506 aaPredicted RBP15.1■□□□□ 0.01
CKS1B-202ENST00000368436 SARGQ9BW04 601 aa15.1■□□□□ 0.01
CKS1B-202ENST00000368436 MMP25Q9NPA2 562 aa15.1■□□□□ 0.01
CKS1B-202ENST00000368436 TAS2R13Q9NYV9 303 aa15.1■□□□□ 0.01
CKS1B-202ENST00000368436 NAALAD2Q9Y3Q0 740 aa15.1■□□□□ 0.01
CKS1B-202ENST00000368436 KLF2Q9Y5W3 355 aaPredicted RBP15.1■□□□□ 0.01
CKS1B-202ENST00000368436 TRGV8A0A0C4DH27 118 aa15.09■□□□□ 0.01
CKS1B-202ENST00000368436 PGRMC1O00264 195 aaKnown RBP15.09■□□□□ 0.01
CKS1B-202ENST00000368436 RDH16O75452 317 aa15.09■□□□□ 0.01
CKS1B-202ENST00000368436 WISP2O76076 250 aa15.09■□□□□ 0.01
CKS1B-202ENST00000368436 AHSGP02765 367 aa15.09■□□□□ 0.01
CKS1B-202ENST00000368436 CDH1P12830 882 aa15.09■□□□□ 0.01
CKS1B-202ENST00000368436 GRK3P35626 688 aa15.09■□□□□ 0.01
CKS1B-202ENST00000368436 FNTAP49354 379 aa15.09■□□□□ 0.01
CKS1B-202ENST00000368436 CDKN2DP55273 166 aa15.09■□□□□ 0.01
CKS1B-202ENST00000368436 PMP22Q01453 160 aa15.09■□□□□ 0.01
CKS1B-202ENST00000368436 SRSF11Q05519 484 aaKnown RBP15.09■□□□□ 0.01
CKS1B-202ENST00000368436 DHX9Q08211 1270 aaKnown RBP15.09■□□□□ 0.01
CKS1B-202ENST00000368436 PHKG1Q16816 387 aa15.09■□□□□ 0.01
CKS1B-202ENST00000368436 MEP1AQ16819 746 aa15.09■□□□□ 0.01
CKS1B-202ENST00000368436 RBM20Q5T481 1227 aaKnown RBP15.09■□□□□ 0.01
CKS1B-202ENST00000368436 CRLF3Q8IUI8 442 aa15.09■□□□□ 0.01
CKS1B-202ENST00000368436 CNTN4Q8IWV2 1026 aa15.09■□□□□ 0.01
CKS1B-202ENST00000368436 SRRM1Q8IYB3 904 aaKnown RBP15.09■□□□□ 0.01
CKS1B-202ENST00000368436 MYO1HQ8N1T3 1032 aa15.09■□□□□ 0.01
CKS1B-202ENST00000368436 MDS2Q8NDY4 140 aa15.09■□□□□ 0.01
CKS1B-202ENST00000368436 ZCCHC10Q8TBK6 192 aa15.09■□□□□ 0.01
CKS1B-202ENST00000368436 ACTRT1Q8TDG2 376 aa15.09■□□□□ 0.01
CKS1B-202ENST00000368436 GRK7Q8WTQ7 553 aa15.09■□□□□ 0.01
CKS1B-202ENST00000368436 CCDC120Q96HB5 630 aa15.09■□□□□ 0.01
CKS1B-202ENST00000368436 OR1F2PQ96R84 312 aa15.09■□□□□ 0.01
CKS1B-202ENST00000368436 NPAS2Q99743 824 aa15.09■□□□□ 0.01
CKS1B-202ENST00000368436 HAUS8Q9BT25 410 aa15.09■□□□□ 0.01
CKS1B-202ENST00000368436 KCNK13Q9HB14 408 aa15.09■□□□□ 0.01
CKS1B-202ENST00000368436 LANCL2Q9NS86 450 aa15.09■□□□□ 0.01
CKS1B-202ENST00000368436 SUCOQ9UBS9 1254 aaKnown RBP15.09■□□□□ 0.01
CKS1B-202ENST00000368436 MAGEB17A8MXT2 336 aa15.08■□□□□ 0
CKS1B-202ENST00000368436 CCL21O00585 134 aa15.08■□□□□ 0
CKS1B-202ENST00000368436 TTC4O95801 387 aa15.08■□□□□ 0
CKS1B-202ENST00000368436 TSPAN12O95859 305 aa15.08■□□□□ 0
CKS1B-202ENST00000368436 HIST1H2AGP0C0S8 130 aaPredicted RBP15.08■□□□□ 0
CKS1B-202ENST00000368436 SLC35G6P0C7Q6 338 aa15.08■□□□□ 0
CKS1B-202ENST00000368436 HIST1H2ADP20671 130 aa15.08■□□□□ 0
CKS1B-202ENST00000368436 GRNP28799 593 aaKnown RBP15.08■□□□□ 0
CKS1B-202ENST00000368436 CD96P40200 585 aa15.08■□□□□ 0
CKS1B-202ENST00000368436 TUBA3CQ13748 450 aa15.08■□□□□ 0
CKS1B-202ENST00000368436 NSDHLQ15738 373 aa15.08■□□□□ 0
CKS1B-202ENST00000368436 SPANXN3Q5MJ09 141 aa15.08■□□□□ 0
CKS1B-202ENST00000368436 FCRLBQ6BAA4 426 aa15.08■□□□□ 0
CKS1B-202ENST00000368436 MTFR2Q6P444 385 aa15.08■□□□□ 0
CKS1B-202ENST00000368436 TUBA3EQ6PEY2 450 aa15.08■□□□□ 0
CKS1B-202ENST00000368436 KIAA0408Q6ZU52 694 aa15.08■□□□□ 0
CKS1B-202ENST00000368436 GALNT7Q86SF2 657 aa15.08■□□□□ 0
CKS1B-202ENST00000368436 ZNF808Q8N4W9 903 aaPredicted RBP15.08■□□□□ 0
CKS1B-202ENST00000368436 OR56A3Q8NH54 315 aa15.08■□□□□ 0
CKS1B-202ENST00000368436 GABPB2Q8TAK5 448 aaPredicted RBP15.08■□□□□ 0
CKS1B-202ENST00000368436 ALKBH8Q96BT7 664 aaKnown RBP15.08■□□□□ 0
CKS1B-202ENST00000368436 LINGO1Q96FE5 620 aa15.08■□□□□ 0
CKS1B-202ENST00000368436 SCMH1Q96GD3 660 aa15.08■□□□□ 0
CKS1B-202ENST00000368436 PEX11GQ96HA9 241 aa15.08■□□□□ 0
CKS1B-202ENST00000368436 HIST1H2AHQ96KK5 128 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms