RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 PRSS41Q7RTY9 318 aa21.32■■□□□ 1
ECHDC1-203ENST00000368291 UBLCP1Q8WVY7 318 aaPredicted RBP21.32■■□□□ 1
ECHDC1-203ENST00000368291 APOBEC4Q8WW27 367 aaKnown RBP21.32■■□□□ 1
ECHDC1-203ENST00000368291 THAP4Q8WY91 577 aa21.32■■□□□ 1
ECHDC1-203ENST00000368291 WDR54Q9H977 334 aa21.32■■□□□ 1
ECHDC1-203ENST00000368291 GEMIN8Q9NWZ8 242 aaKnown RBP21.32■■□□□ 1
ECHDC1-203ENST00000368291 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.32■■□□□ 1
ECHDC1-203ENST00000368291 ZFP69BQ9UJL9 534 aa21.32■■□□□ 1
ECHDC1-203ENST00000368291 V9GYY5 206 aaPredicted RBP21.32■■□□□ 1
ECHDC1-203ENST00000368291 BSNQ9UPA5 3926 aa21.32■■□□□ 1
ECHDC1-203ENST00000368291 SMG1Q96Q15 3661 aaKnown RBP21.31■■□□□ 1
ECHDC1-203ENST00000368291 IGLV3-12A0A075B6K2 115 aa21.31■■□□□ 1
ECHDC1-203ENST00000368291 SYCE1LA8MT33 242 aa21.31■■□□□ 1
ECHDC1-203ENST00000368291 CCNT2O60583 730 aaKnown RBP21.31■■□□□ 1
ECHDC1-203ENST00000368291 COL6A2P12110 1019 aa21.31■■□□□ 1
ECHDC1-203ENST00000368291 AHRP35869 848 aa21.31■■□□□ 1
ECHDC1-203ENST00000368291 FOLR3P41439 243 aa21.31■■□□□ 1
ECHDC1-203ENST00000368291 CCR10P46092 362 aa21.31■■□□□ 1
ECHDC1-203ENST00000368291 NDUFA9Q16795 377 aa21.31■■□□□ 1
ECHDC1-203ENST00000368291 LGSNQ5TDP6 509 aa21.31■■□□□ 1
ECHDC1-203ENST00000368291 LRRC70Q7Z2Q7 622 aa21.31■■□□□ 1
ECHDC1-203ENST00000368291 SHISA5Q8N114 240 aa21.31■■□□□ 1
ECHDC1-203ENST00000368291 MZB1Q8WU39 189 aa21.31■■□□□ 1
ECHDC1-203ENST00000368291 COL26A1Q96A83 441 aa21.31■■□□□ 1
ECHDC1-203ENST00000368291 MTBPQ96DY7 904 aa21.31■■□□□ 1
ECHDC1-203ENST00000368291 ARHGAP9Q9BRR9 750 aa21.31■■□□□ 1
ECHDC1-203ENST00000368291 CAPS2Q9BXY5 557 aa21.31■■□□□ 1
ECHDC1-203ENST00000368291 COPG2Q9UBF2 871 aa21.31■■□□□ 1
ECHDC1-203ENST00000368291 CDC14AQ9UNH5 594 aa21.31■■□□□ 1
ECHDC1-203ENST00000368291 MAN2B2Q9Y2E5 1009 aa21.31■■□□□ 1
ECHDC1-203ENST00000368291 TK2O00142 265 aa21.3■■□□□ 1
ECHDC1-203ENST00000368291 FFAR3O14843 346 aa21.3■■□□□ 1
ECHDC1-203ENST00000368291 GPR42O15529 346 aa21.3■■□□□ 1
ECHDC1-203ENST00000368291 NDUFS4O43181 175 aa21.3■■□□□ 1
ECHDC1-203ENST00000368291 CD22P20273 847 aa21.3■■□□□ 1
ECHDC1-203ENST00000368291 FBLP22087 321 aaKnown RBP21.3■■□□□ 1
ECHDC1-203ENST00000368291 POLE2P56282 527 aa21.3■■□□□ 1
ECHDC1-203ENST00000368291 HYAL2Q12891 473 aa21.3■■□□□ 1
ECHDC1-203ENST00000368291 DSG2Q14126 1118 aa21.3■■□□□ 1
ECHDC1-203ENST00000368291 E2F2Q14209 437 aa21.3■■□□□ 1
ECHDC1-203ENST00000368291 SETDB1Q15047 1291 aa21.3■■□□□ 1
ECHDC1-203ENST00000368291 PDK4Q16654 411 aa21.3■■□□□ 1
ECHDC1-203ENST00000368291 SNX31Q8N9S9 440 aa21.3■■□□□ 1
ECHDC1-203ENST00000368291 OR9A4Q8NGU2 314 aa21.3■■□□□ 1
ECHDC1-203ENST00000368291 ZCCHC10Q8TBK6 192 aa21.3■■□□□ 1
ECHDC1-203ENST00000368291 NT5CQ8TCD5 201 aa21.3■■□□□ 1
ECHDC1-203ENST00000368291 STT3BQ8TCJ2 826 aa21.3■■□□□ 1
ECHDC1-203ENST00000368291 WDR34Q96EX3 536 aa21.3■■□□□ 1
ECHDC1-203ENST00000368291 MMABQ96EY8 250 aaPredicted RBP21.3■■□□□ 1
ECHDC1-203ENST00000368291 PSMC3IPQ9P2W1 217 aaPredicted RBP21.3■■□□□ 1
ECHDC1-203ENST00000368291 TNRC6AQ8NDV7 1962 aaKnown RBP21.29■■□□□ 1
ECHDC1-203ENST00000368291 DOCK10Q96BY6 2186 aa21.29■■□□□ 1
ECHDC1-203ENST00000368291 COL6A6A6NMZ7 2263 aa21.29■■□□□ 1
ECHDC1-203ENST00000368291 LRRC14BA6NHZ5 514 aa21.29■■□□□ 1
ECHDC1-203ENST00000368291 NSA2O95478 260 aaKnown RBP21.29■■□□□ 1
ECHDC1-203ENST00000368291 PRB1P04280 392 aa21.29■■□□□ 1
ECHDC1-203ENST00000368291 SBK3P0C264 359 aa21.29■■□□□ 1
ECHDC1-203ENST00000368291 SLC35G6P0C7Q6 338 aa21.29■■□□□ 1
ECHDC1-203ENST00000368291 IL1RNP18510 177 aa21.29■■□□□ 1
ECHDC1-203ENST00000368291 OTX2P32243 289 aa21.29■■□□□ 1
ECHDC1-203ENST00000368291 PWP1Q13610 501 aa21.29■■□□□ 1
ECHDC1-203ENST00000368291 SLBPQ14493 270 aaKnown RBP eCLIP21.29■■□□□ 1
ECHDC1-203ENST00000368291 RBBP5Q15291 538 aaKnown RBP21.29■■□□□ 1
ECHDC1-203ENST00000368291 PFKFB4Q16877 469 aa21.29■■□□□ 1
ECHDC1-203ENST00000368291 SYT16Q17RD7 645 aa21.29■■□□□ 1
ECHDC1-203ENST00000368291 TSNAXIP1Q2TAA8 658 aa21.29■■□□□ 1
ECHDC1-203ENST00000368291 VWA2Q5GFL6 755 aa21.29■■□□□ 1
ECHDC1-203ENST00000368291 WDR93Q6P2C0 686 aa21.29■■□□□ 1
ECHDC1-203ENST00000368291 SHISA6Q6ZSJ9 500 aa21.29■■□□□ 1
ECHDC1-203ENST00000368291 TMEM151AQ8N4L1 468 aa21.29■■□□□ 1
ECHDC1-203ENST00000368291 TBC1D19Q8N5T2 526 aa21.29■■□□□ 1
ECHDC1-203ENST00000368291 CREB3L4Q8TEY5 395 aa21.29■■□□□ 1
ECHDC1-203ENST00000368291 TRIM55Q9BYV6 548 aa21.29■■□□□ 1
ECHDC1-203ENST00000368291 AICDAQ9GZX7 198 aa21.29■■□□□ 1
ECHDC1-203ENST00000368291 EHD1Q9H4M9 534 aa21.29■■□□□ 1
ECHDC1-203ENST00000368291 SOX17Q9H6I2 414 aaPredicted RBP21.29■■□□□ 1
ECHDC1-203ENST00000368291 ZNF282Q9UDV7 671 aaPredicted RBP21.29■■□□□ 1
ECHDC1-203ENST00000368291 SLC22A7Q9Y694 548 aa21.29■■□□□ 1
ECHDC1-203ENST00000368291 H0YIG0 161 aa21.28■■□□□ 1
ECHDC1-203ENST00000368291 K7EPI3 171 aa21.28■■□□□ 1
ECHDC1-203ENST00000368291 CLGNO14967 610 aa21.28■■□□□ 1
ECHDC1-203ENST00000368291 RBP1P09455 135 aa21.28■■□□□ 1
ECHDC1-203ENST00000368291 ZGLP1P0C6A0 271 aa21.28■■□□□ 1
ECHDC1-203ENST00000368291 HSD17B3P37058 310 aa21.28■■□□□ 1
ECHDC1-203ENST00000368291 ALDH18A1P54886 795 aaKnown RBP21.28■■□□□ 1
ECHDC1-203ENST00000368291 MAT1AQ00266 395 aaKnown RBP21.28■■□□□ 1
ECHDC1-203ENST00000368291 PCDH1Q08174 1060 aa21.28■■□□□ 1
ECHDC1-203ENST00000368291 ATP1A4Q13733 1029 aa21.28■■□□□ 1
ECHDC1-203ENST00000368291 DOC2AQ14183 400 aa21.28■■□□□ 1
ECHDC1-203ENST00000368291 NAA30Q147X3 362 aaPredicted RBP21.28■■□□□ 1
ECHDC1-203ENST00000368291 ERCC6LQ2NKX8 1250 aa21.28■■□□□ 1
ECHDC1-203ENST00000368291 CPZQ66K79 652 aa21.28■■□□□ 1
ECHDC1-203ENST00000368291 PPP1R32Q7Z5V6 425 aa21.28■■□□□ 1
ECHDC1-203ENST00000368291 PDSS2Q86YH6 399 aa21.28■■□□□ 1
ECHDC1-203ENST00000368291 APLFQ8IW19 511 aaPredicted RBP21.28■■□□□ 1
ECHDC1-203ENST00000368291 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP21.28■■□□□ 1
ECHDC1-203ENST00000368291 AFAP1L2Q8N4X5 818 aa21.28■■□□□ 1
ECHDC1-203ENST00000368291 AENQ8WTP8 325 aaKnown RBP21.28■■□□□ 1
ECHDC1-203ENST00000368291 SLC6A16Q9GZN6 736 aa21.28■■□□□ 1
ECHDC1-203ENST00000368291 XPR1Q9UBH6 696 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms