RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 CDKN2BP42772 138 aa13.67□□□□□ -0.22
VAMP4-202ENST00000367740 PPIAP62937 165 aaKnown RBP13.67□□□□□ -0.22
VAMP4-202ENST00000367740 NSDHLQ15738 373 aa13.67□□□□□ -0.22
VAMP4-202ENST00000367740 NDUFA9Q16795 377 aa13.67□□□□□ -0.22
VAMP4-202ENST00000367740 FBXL19-AS1Q494R0 122 aa13.67□□□□□ -0.22
VAMP4-202ENST00000367740 ZNF425Q6IV72 752 aa13.67□□□□□ -0.22
VAMP4-202ENST00000367740 HMBOX1Q6NT76 420 aa13.67□□□□□ -0.22
VAMP4-202ENST00000367740 TTC23LQ6PF05 361 aa13.67□□□□□ -0.22
VAMP4-202ENST00000367740 ARMC10Q8N2F6 343 aa13.67□□□□□ -0.22
VAMP4-202ENST00000367740 RAB42Q8N4Z0 105 aa13.67□□□□□ -0.22
VAMP4-202ENST00000367740 TMEM158Q8WZ71 300 aa13.67□□□□□ -0.22
VAMP4-202ENST00000367740 TBL1YQ9BQ87 522 aa13.67□□□□□ -0.22
VAMP4-202ENST00000367740 RBCK1Q9BYM8 510 aa13.67□□□□□ -0.22
VAMP4-202ENST00000367740 C10orf88Q9H8K7 445 aa13.67□□□□□ -0.22
VAMP4-202ENST00000367740 ARNT2Q9HBZ2 717 aa13.67□□□□□ -0.22
VAMP4-202ENST00000367740 MRPS30Q9NP92 439 aaKnown RBP13.67□□□□□ -0.22
VAMP4-202ENST00000367740 PCYOX1Q9UHG3 505 aa13.67□□□□□ -0.22
VAMP4-202ENST00000367740 AAR2Q9Y312 384 aaKnown RBP13.67□□□□□ -0.22
VAMP4-202ENST00000367740 FEZF1A0PJY2 475 aa13.66□□□□□ -0.22
VAMP4-202ENST00000367740 TUBAL3A6NHL2 446 aa13.66□□□□□ -0.22
VAMP4-202ENST00000367740 IQCF5A8MTL0 148 aa13.66□□□□□ -0.22
VAMP4-202ENST00000367740 FCHO1O14526 889 aa13.66□□□□□ -0.22
VAMP4-202ENST00000367740 SLC16A5O15375 505 aa13.66□□□□□ -0.22
VAMP4-202ENST00000367740 WDR1O75083 606 aa13.66□□□□□ -0.22
VAMP4-202ENST00000367740 CDC123O75794 336 aaPredicted RBP13.66□□□□□ -0.22
VAMP4-202ENST00000367740 IGHG3P01860 377 aa13.66□□□□□ -0.22
VAMP4-202ENST00000367740 HRGP04196 525 aa13.66□□□□□ -0.22
VAMP4-202ENST00000367740 APOA4P06727 396 aa13.66□□□□□ -0.22
VAMP4-202ENST00000367740 IL1RNP18510 177 aa13.66□□□□□ -0.22
VAMP4-202ENST00000367740 OR4D2P58180 307 aa13.66□□□□□ -0.22
VAMP4-202ENST00000367740 SPARCL1Q14515 664 aa13.66□□□□□ -0.22
VAMP4-202ENST00000367740 POU4F3Q15319 338 aa13.66□□□□□ -0.22
VAMP4-202ENST00000367740 ITPRIPL1Q6GPH6 555 aa13.66□□□□□ -0.22
VAMP4-202ENST00000367740 PRSS57Q6UWY2 283 aa13.66□□□□□ -0.22
VAMP4-202ENST00000367740 YTHDF3Q7Z739 585 aaKnown RBP13.66□□□□□ -0.22
VAMP4-202ENST00000367740 SLC13A5Q86YT5 568 aaPredicted RBP13.66□□□□□ -0.22
VAMP4-202ENST00000367740 PLPP5Q8NEB5 264 aa13.66□□□□□ -0.22
VAMP4-202ENST00000367740 P3H4Q92791 437 aa13.66□□□□□ -0.22
VAMP4-202ENST00000367740 PACSIN1Q9BY11 444 aa13.66□□□□□ -0.22
VAMP4-202ENST00000367740 LANCL2Q9NS86 450 aa13.66□□□□□ -0.22
VAMP4-202ENST00000367740 SPATA7Q9P0W8 599 aa13.66□□□□□ -0.22
VAMP4-202ENST00000367740 TTC7AQ9ULT0 858 aaPredicted RBP13.66□□□□□ -0.22
VAMP4-202ENST00000367740 BZW2Q9Y6E2 419 aaKnown RBP13.66□□□□□ -0.22
VAMP4-202ENST00000367740 A0A1B0GVC2 190 aa13.65□□□□□ -0.22
VAMP4-202ENST00000367740 MAGEB17A8MXT2 336 aa13.65□□□□□ -0.22
VAMP4-202ENST00000367740 HACD1B0YJ81 288 aa13.65□□□□□ -0.22
VAMP4-202ENST00000367740 FAM47E-STBD1D6RA91 191 aa13.65□□□□□ -0.22
VAMP4-202ENST00000367740 SGK494L7N484 410 aa13.65□□□□□ -0.22
VAMP4-202ENST00000367740 ACOT7O00154 380 aa13.65□□□□□ -0.22
VAMP4-202ENST00000367740 HAT1O14929 419 aa13.65□□□□□ -0.22
VAMP4-202ENST00000367740 SMPD2O60906 423 aa13.65□□□□□ -0.22
VAMP4-202ENST00000367740 GOSR1O95249 250 aa13.65□□□□□ -0.22
VAMP4-202ENST00000367740 ERGP11308 486 aa13.65□□□□□ -0.22
VAMP4-202ENST00000367740 PKMP14618 531 aaKnown RBP13.65□□□□□ -0.22
VAMP4-202ENST00000367740 BMP5P22003 454 aa13.65□□□□□ -0.22
VAMP4-202ENST00000367740 AOAHP28039 575 aa13.65□□□□□ -0.22
VAMP4-202ENST00000367740 RBL1P28749 1068 aa13.65□□□□□ -0.22
VAMP4-202ENST00000367740 BCL6P41182 706 aa13.65□□□□□ -0.22
VAMP4-202ENST00000367740 KRTAP1-1Q07627 177 aa13.65□□□□□ -0.22
VAMP4-202ENST00000367740 TFDP2Q14188 446 aa13.65□□□□□ -0.22
VAMP4-202ENST00000367740 NFKBIBQ15653 356 aa13.65□□□□□ -0.22
VAMP4-202ENST00000367740 SUSD1Q6UWL2 747 aa13.65□□□□□ -0.22
VAMP4-202ENST00000367740 TRILQ7L0X0 811 aa13.65□□□□□ -0.22
VAMP4-202ENST00000367740 NAXEQ8NCW5 288 aa13.65□□□□□ -0.22
VAMP4-202ENST00000367740 STYXQ8WUJ0 223 aa13.65□□□□□ -0.22
VAMP4-202ENST00000367740 CNPPD1Q9BV87 410 aa13.65□□□□□ -0.22
VAMP4-202ENST00000367740 FEZ2Q9UHY8 353 aaPredicted RBP13.65□□□□□ -0.22
VAMP4-202ENST00000367740 A0A0G2JMM0 328 aa13.64□□□□□ -0.23
VAMP4-202ENST00000367740 A0A1W2PPB8 328 aa13.64□□□□□ -0.23
VAMP4-202ENST00000367740 A0A1W2PRS3 328 aa13.64□□□□□ -0.23
VAMP4-202ENST00000367740 CCDC162PA2VCL2 907 aa13.64□□□□□ -0.23
VAMP4-202ENST00000367740 KIR3DP1A8MWS1 328 aa13.64□□□□□ -0.23
VAMP4-202ENST00000367740 AQP7O14520 342 aa13.64□□□□□ -0.23
VAMP4-202ENST00000367740 TUBB4AP04350 444 aa13.64□□□□□ -0.23
VAMP4-202ENST00000367740 H2AFZP0C0S5 128 aa13.64□□□□□ -0.23
VAMP4-202ENST00000367740 BMP7P18075 431 aa13.64□□□□□ -0.23
VAMP4-202ENST00000367740 PSMA3P25788 255 aa13.64□□□□□ -0.23
VAMP4-202ENST00000367740 MPP1Q00013 466 aa13.64□□□□□ -0.23
VAMP4-202ENST00000367740 PLGLB1Q02325 96 aa13.64□□□□□ -0.23
VAMP4-202ENST00000367740 POU6F1Q14863 301 aa13.64□□□□□ -0.23
VAMP4-202ENST00000367740 TYSND1Q2T9J0 566 aa13.64□□□□□ -0.23
VAMP4-202ENST00000367740 FILIP1LQ4L180 1135 aa13.64□□□□□ -0.23
VAMP4-202ENST00000367740 ODF2Q5BJF6 829 aa13.64□□□□□ -0.23
VAMP4-202ENST00000367740 CATSPEREQ5SY80 951 aa13.64□□□□□ -0.23
VAMP4-202ENST00000367740 LRRC38Q5VT99 294 aa13.64□□□□□ -0.23
VAMP4-202ENST00000367740 PODNL1Q6PEZ8 512 aa13.64□□□□□ -0.23
VAMP4-202ENST00000367740 SEM1Q6ZVN7 128 aa13.64□□□□□ -0.23
VAMP4-202ENST00000367740 H2AFVQ71UI9 128 aa13.64□□□□□ -0.23
VAMP4-202ENST00000367740 PLD3Q8IV08 490 aa13.64□□□□□ -0.23
VAMP4-202ENST00000367740 KRT222Q8N1A0 295 aa13.64□□□□□ -0.23
VAMP4-202ENST00000367740 PSD4Q8NDX1 1056 aa13.64□□□□□ -0.23
VAMP4-202ENST00000367740 OR2M7Q8NG81 312 aa13.64□□□□□ -0.23
VAMP4-202ENST00000367740 LINC01560Q8TB33 94 aa13.64□□□□□ -0.23
VAMP4-202ENST00000367740 LRRC46Q96FV0 321 aa13.64□□□□□ -0.23
VAMP4-202ENST00000367740 PIP5K1AQ99755 562 aa13.64□□□□□ -0.23
VAMP4-202ENST00000367740 CARD6Q9BX69 1037 aa13.64□□□□□ -0.23
VAMP4-202ENST00000367740 TTTY12Q9BZ98 90 aa13.64□□□□□ -0.23
VAMP4-202ENST00000367740 FOXD3Q9UJU5 478 aaPredicted RBP13.64□□□□□ -0.23
VAMP4-202ENST00000367740 VPS9D1Q9Y2B5 631 aa13.64□□□□□ -0.23
VAMP4-202ENST00000367740 R3HDM2Q9Y2K5 976 aaKnown RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms