RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 B3GNT5Q9BYG0 378 aa3.65□□□□□ -1.82
SYNE1-207ENST00000367255 KATNBL1Q9H079 304 aa3.65□□□□□ -1.82
SYNE1-207ENST00000367255 WASF3Q9UPY6 502 aa3.65□□□□□ -1.82
SYNE1-207ENST00000367255 BLOC1S5-TXNDC5H3BN57 136 aa3.65□□□□□ -1.82
SYNE1-207ENST00000367255 CYBBP04839 570 aa3.65□□□□□ -1.82
SYNE1-207ENST00000367255 CD58P19256 250 aa3.65□□□□□ -1.82
SYNE1-207ENST00000367255 EIF3IQ13347 325 aaKnown RBP3.65□□□□□ -1.82
SYNE1-207ENST00000367255 TGFBIQ15582 683 aa3.65□□□□□ -1.82
SYNE1-207ENST00000367255 AGBL3Q8NEM8 1001 aa3.65□□□□□ -1.82
SYNE1-207ENST00000367255 PROKR2Q8NFJ6 384 aa3.65□□□□□ -1.82
SYNE1-207ENST00000367255 C2orf49Q9BVC5 232 aaPredicted RBP3.65□□□□□ -1.82
SYNE1-207ENST00000367255 ASPNQ9BXN1 380 aa3.65□□□□□ -1.82
SYNE1-207ENST00000367255 FBXO9Q9UK97 447 aaPredicted RBP3.65□□□□□ -1.82
SYNE1-207ENST00000367255 USP18Q9UMW8 372 aa3.65□□□□□ -1.82
SYNE1-207ENST00000367255 RNF6Q9Y252 685 aa3.65□□□□□ -1.82
SYNE1-207ENST00000367255 ZNF207O43670 478 aaKnown RBP3.65□□□□□ -1.82
SYNE1-207ENST00000367255 ALPIP09923 528 aa3.65□□□□□ -1.82
SYNE1-207ENST00000367255 RAB10P61026 200 aa3.65□□□□□ -1.82
SYNE1-207ENST00000367255 ZNF235Q14590 738 aa3.65□□□□□ -1.82
SYNE1-207ENST00000367255 USP39Q53GS9 565 aaKnown RBP3.65□□□□□ -1.82
SYNE1-207ENST00000367255 RHOXF1Q8NHV9 184 aa3.65□□□□□ -1.82
SYNE1-207ENST00000367255 PNO1Q9NRX1 252 aaKnown RBP3.65□□□□□ -1.82
SYNE1-207ENST00000367255 ACSL6Q9UKU0 697 aa3.65□□□□□ -1.82
SYNE1-207ENST00000367255 FOXN3O00409 490 aaPredicted RBP3.65□□□□□ -1.82
SYNE1-207ENST00000367255 TSPAN12O95859 305 aa3.65□□□□□ -1.82
SYNE1-207ENST00000367255 G0S2P27469 103 aa3.65□□□□□ -1.82
SYNE1-207ENST00000367255 CLCNKBP51801 687 aa3.65□□□□□ -1.82
SYNE1-207ENST00000367255 CDK6Q00534 326 aa3.65□□□□□ -1.82
SYNE1-207ENST00000367255 PNRC1Q12796 327 aaPredicted RBP3.65□□□□□ -1.82
SYNE1-207ENST00000367255 CDO1Q16878 200 aa3.65□□□□□ -1.82
SYNE1-207ENST00000367255 WDR59Q6PJI9 974 aa3.65□□□□□ -1.82
SYNE1-207ENST00000367255 MOB1BQ7L9L4 216 aa3.65□□□□□ -1.82
SYNE1-207ENST00000367255 MFSD8Q8NHS3 518 aa3.65□□□□□ -1.82
SYNE1-207ENST00000367255 IFT43Q96FT9 208 aa3.65□□□□□ -1.82
SYNE1-207ENST00000367255 ABHD14BQ96IU4 210 aa3.65□□□□□ -1.82
SYNE1-207ENST00000367255 SDF2Q99470 211 aa3.65□□□□□ -1.82
SYNE1-207ENST00000367255 SLC22A31A6NKX4 558 aa3.65□□□□□ -1.82
SYNE1-207ENST00000367255 GPR137BO60478 399 aa3.65□□□□□ -1.82
SYNE1-207ENST00000367255 POMCP01189 267 aa3.65□□□□□ -1.82
SYNE1-207ENST00000367255 SULT1A2P50226 295 aa3.65□□□□□ -1.82
SYNE1-207ENST00000367255 MTCP1P56278 107 aa3.65□□□□□ -1.82
SYNE1-207ENST00000367255 TXNRD1Q16881 649 aa3.65□□□□□ -1.82
SYNE1-207ENST00000367255 AMZ1Q400G9 498 aa3.65□□□□□ -1.82
SYNE1-207ENST00000367255 CNOT6Q9ULM6 557 aaKnown RBP3.65□□□□□ -1.82
SYNE1-207ENST00000367255 MT-ND1P03886 318 aa3.65□□□□□ -1.82
SYNE1-207ENST00000367255 MMP15P51511 669 aa3.65□□□□□ -1.82
SYNE1-207ENST00000367255 ZNF697Q5TEC3 545 aa3.65□□□□□ -1.82
SYNE1-207ENST00000367255 HMBOX1Q6NT76 420 aa3.65□□□□□ -1.82
SYNE1-207ENST00000367255 RIMS4Q9H426 269 aaPredicted RBP3.65□□□□□ -1.82
SYNE1-207ENST00000367255 TRAV34A0A0B4J273 112 aa3.65□□□□□ -1.82
SYNE1-207ENST00000367255 STAG3L3P0CL85 134 aa3.65□□□□□ -1.82
SYNE1-207ENST00000367255 GHRHRQ02643 423 aa3.65□□□□□ -1.82
SYNE1-207ENST00000367255 MZT1Q08AG7 82 aa3.65□□□□□ -1.82
SYNE1-207ENST00000367255 MAMLD1Q13495 774 aa3.65□□□□□ -1.82
SYNE1-207ENST00000367255 TRMT10BQ6PF06 316 aaKnown RBP3.65□□□□□ -1.82
SYNE1-207ENST00000367255 FOXRED2Q8IWF2 684 aa3.65□□□□□ -1.82
SYNE1-207ENST00000367255 BAP1Q92560 729 aa3.65□□□□□ -1.82
SYNE1-207ENST00000367255 PIP5K1BO14986 540 aa3.65□□□□□ -1.82
SYNE1-207ENST00000367255 HBP1O60381 514 aa3.65□□□□□ -1.82
SYNE1-207ENST00000367255 FMO6PO60774 539 aa3.65□□□□□ -1.82
SYNE1-207ENST00000367255 CD63P08962 238 aa3.65□□□□□ -1.82
SYNE1-207ENST00000367255 PTPN3P26045 913 aa3.65□□□□□ -1.82
SYNE1-207ENST00000367255 PBX3P40426 434 aa3.65□□□□□ -1.82
SYNE1-207ENST00000367255 TMEM115Q12893 351 aaPredicted RBP3.65□□□□□ -1.82
SYNE1-207ENST00000367255 GPR153Q6NV75 609 aa3.65□□□□□ -1.82
SYNE1-207ENST00000367255 CACUL1Q86Y37 369 aa3.65□□□□□ -1.82
SYNE1-207ENST00000367255 HSFX1Q9UBD0 423 aa3.65□□□□□ -1.82
SYNE1-207ENST00000367255 SERPINE2P07093 398 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 JAM2P57087 298 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 HMGCS1Q01581 520 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 RHAGQ02094 409 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 CEP68Q76N32 757 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 HCAR2Q8TDS4 363 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 FCRL4Q96PJ5 515 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 SORT1Q99523 831 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 FBXL4Q9UKA2 621 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 PCDHGA5Q9Y5G8 931 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 SPTA1P02549 2419 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 C2P06681 752 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 RAB31Q13636 194 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 NTRK2Q16620 822 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 IQCCQ4KMZ1 466 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 LRRC3BQ96PB8 259 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 SEMA4AQ9H3S1 761 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 ZNF408Q9H9D4 720 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 POMPQ9Y244 141 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 LOC100506127A0A0U1RQW1 187 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 HCRTR2O43614 444 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 PLIN3O60664 434 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 BPNT1O95861 308 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 FGFR1P11362 822 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 PKMP14618 531 aaKnown RBP3.65□□□□□ -1.83
SYNE1-207ENST00000367255 RAB7AP51149 207 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 CCR6P51684 374 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 NUP54Q7Z3B4 507 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 FAM83AQ86UY5 434 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 ZNF431Q8TF32 576 aaPredicted RBP3.65□□□□□ -1.83
SYNE1-207ENST00000367255 ZNF382Q96SR6 550 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 FARSBQ9NSD9 589 aaKnown RBP3.65□□□□□ -1.83
SYNE1-207ENST00000367255 POLLQ9UGP5 575 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms